TCONS_00046822-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046822-protein
Unique NameTCONS_00046822-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length274

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046822-protein ID=TCONS_00046822-protein|Name=TCONS_00046822-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
FFSYLQKIYKKKEIRRNRKINIQELIWKMSFAGKKVLVTGAGKGIGKGCC
IDLAKQGADVFALSRTQKDLDDLKNELPNIHCINVDLLDVSATSDALEKL
PDDITMVVNNAGYSKVGHFLDVTEEDFDMIWKINVKSMFIVSQIMAKKMI
QNGKGGSFVNVSSQASKVALPEHTAYCTSKGGVDQLTRMMALELGPHQIR
TNAVNPTVVLTKMGKMVWDNPNGIPMKNGIPQGKFAEVEDVVNAILYLLS
DKSDMINGTTLPIDGGFLACRTMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029870XLOC_029870Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046822TCONS_00046822Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 35..52
score: 38.78
coord: 150..166
score: 30.16
coord: 176..195
score: 39.21
coord: 197..214
score: 35.19
coord: 231..251
score: 30.65
coord: 102..113
score: 38.2
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 102..113
score: 37.68
coord: 176..195
score: 35.64
coord: 156..164
score: 44.12
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 40..267
e-value: 7.5E-51
score: 172.8
NoneNo IPR availableGENE3D3.40.50.720coord: 4..270
e-value: 9.5E-67
score: 224.7
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 163..191
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 33..269

Blast
[Close]
BLAST of TCONS_00046822-protein vs. Swiss-Prot (Human)
Match: DCXR (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.004e-85
Identity = 129/244 (52.87%), Postives = 173/244 (70.90%), Query Frame = 0 
Query:   28 KMSFAGKKVLVTGAGKGIGKGCCIDLAKQGADVFALSRTQKDLDDLKNELPNIHCINVDLLDVSATSDALEKLPDDITMVVNNAGYSKVGHFLDVTEEDFDMIWKINVKSMFIVSQIMAKKMIQNGKGGSFVNVSSQASKVALPEHTAYCTSKGGVDQLTRMMALELGPHQIRTNAVNPTVVLTKMGKMVWDNPN-GIPMKNGIPQGKFAEVEDVVNAILYLLSDKSDMINGTTLPIDGGFLAC 270
            ++  AG++VLVTGAGKGIG+G    L   GA V A+SRTQ DLD L  E P I  + VDL D  AT  AL  +   + ++VNNA  + +  FL+VT+E FD  +++N++++  VSQI+A+ +I  G  G+ VNVSSQ S+ A+  H+ YC++KG +D LT++MALELGPH+IR NAVNPTVV+T MG+  W +P+    M N IP GKFAEVE VVNAIL+LLSD+S M  G+TLP++GGF AC
Sbjct:    2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV-GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWAC 244
The following BLAST results are available for this feature:
BLAST of TCONS_00046822-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCXR2.004e-8552.87L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
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