TCONS_00047110-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047110-protein
Unique NameTCONS_00047110-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047110-protein ID=TCONS_00047110-protein|Name=TCONS_00047110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1170bp
MNKKSIIPLIVFISILLMHCGSGDGCECKDYTGLVIVNNSGSHCNKNDGI
NRWTCPSLQATFENKDISLNDSCICIVVDKASLNKTFHITAQRLIITSDR
KSNIKCSLENETGLSFNASSNIEITSLIFTGCGHVDPSISQDLNISSAFF
FQNSKDITLKNVNITSAEGYAFYFRDCTSKIEMQFVDVRLNRLKLFGGGV
IVIKEKYVEPMKMSLNGCCFSILNAYEPDKQILEPFGYGGALSIHISKCD
NNQVIIGDHTGFQRNSAISGGAVSVHIGKSSTNNTFKFDGIIFTGNTAVK
SGGAVDIVTKEYTHPFNNTFIFSGCTFKDNTAGYYGGAFSQSKTFRTYHE
MPKTDDFYGTHFISCFFLLNSAKLGAAIYLDDTYVIFDAKPNNPSTISQN
NREVGNSNFAALFAYSTDILIKGELICKENSHTAFVLDYSYLHVNNTVLF
TRNIGNKGGAISLYEESTIFFYGNGLLNFTENSALKGGAIYCQYEVAPIR
IFNNNGYLSYRCFYSIIQSTREHVMLFTNNTASEGQGKTIYASTLNYCHI
QQLENAFDLQHNDGISSINTDPKHLSISESQWQNLYPGKVFSPTVNLTDD
LGNSVSAIVQIKLSSKSVAIDQNYTRFLVTSNQIQRQLSFVGSSKSNKSF
KITISATSGTSTPKTIETNIQGCIFGYEFNERNEKCECSQNNRITRCEGD
NVYFHKDQWVYRNSTKDIHTCPQFYCKCHNDNETNDCLYKANEQCNTDRD
QTSKVCSKCKSGTTVGFGGNKCNTHCKNSYGIFWILVVLMVTIFIVMYLL
IIVDIDIYKNYLNSTFYFYQIVSMFFTSVNLYIDPVIWAFKSVFILEGFH
IANTAGVCILERFDELDKLFFNYLFPIFAFAWIGLIFLLGKKFNWFSYKT
DNYIHASIFVIVWAYGDLARVSFKIFKFVTISNHKYVFVEADIPYFHSPR
HQAYLIIASLIFVLIVAFPFILMFSYKINPKYPYLIPFFDYYKSYLKDDS
ISQLFASYYFICRILLSIIETFFFTDRLGAQKTLLSCISLVVFIVFAAVK
PYKTTKEQNFEYLNIYDSVILFLLSNVAILTCANGSLAAENPNIKVNNIL
LNIILAAPAIWVALNFLYRLCSYLVKKWRERALQRRVEDEEDDHRRALLR
ESLIQNSDVDDDEDDDEIDG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030035XLOC_030035Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047110TCONS_00047110Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 474..493
e-value: 3.7E-4
score: 18.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 258..337
coord: 103..225

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047110-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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