TCONS_00048558-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048558-protein
Unique NameTCONS_00048558-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048558-protein ID=TCONS_00048558-protein|Name=TCONS_00048558-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MFVXMVQEVKTMAEYQQILADNKYVCVDYFATWCGPCRMIAPKIQEFEGK
YGNVKFIKVDVDQATDIAEKEGISAMPTFKFFTNGERSGEVIGASEAKIK
EELEKCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030873XLOC_030873Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048558TCONS_00048558Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
molecular_function GO:0015035 protein disulfide oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 33..42
score: 67.44
coord: 72..83
score: 39.44
coord: 25..33
score: 45.68
NoneNo IPR availableGENE3D3.40.30.10coord: 3..107
e-value: 2.8E-30
score: 104.7
NoneNo IPR availableSFLDSFLDG00337Thioredoxin-likecoord: 5..105
e-value: 5.4E-31
score: 101.6
NoneNo IPR availableCDDcd02947TRX_familycoord: 13..104
e-value: 2.52203E-32
score: 109.185
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 3..107
e-value: 1.6E-30
score: 103.2
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 10..105
e-value: 2.5E-28
score: 98.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..104
score: 12.131
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 5..105

Blast
[Close]
BLAST of TCONS_00048558-protein vs. Swiss-Prot (Human)
Match: THIO (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 2.300e-25
Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    5 MVQEVKTMAEYQQIL--ADNKYVCVDYFATWCGPCRMIAPKIQEFEGKYGNVKFIKVDVDQATDIAEKEGISAMPTFKFFTNGERSGEVIGASEAKIK 100
            MV+++++   +Q+ L  A +K V VD+ ATWCGPC+MI P       KY NV F++VDVD   D+A +  +  MPTF+FF  G++ GE  GA++ K++
Sbjct:    1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98
The following BLAST results are available for this feature:
BLAST of TCONS_00048558-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THIO2.300e-2542.86Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3[more]
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