TCONS_00051402-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051402-protein
Unique NameTCONS_00051402-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051402-protein ID=TCONS_00051402-protein|Name=TCONS_00051402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MALVYKTHPVILIEINLYKKPINPRFIDPTLSQLDERLVRILAFQRLQQL
VEKKSQQIPKISQPGITEKKIHLQTTETKNSIAVLSPLNGLGPACYMRYK
SFNTGQGADMDLCLSNYGFCNYVSGKHATIFYDKETRQFELLNYSEHGTI
VDNVLYSCDFSEKPKHNVTSSNAKFDTGSKYLDMQQRRKKPPIGRTTRGL
GTEFITRACNCRASASSLIGGSGAGWEGTAVLHHGSYVKFGCLHFVFSIV
ECASKEQLKAVGGAQNVESSKKPISNHPKEITTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032574XLOC_032574Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051402TCONS_00051402Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 43..263
e-value: 2.1E-24
score: 85.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..284
NoneNo IPR availableCDDcd00060FHAcoord: 123..155
e-value: 1.21498E-4
score: 38.1362
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 105..154
e-value: 1.5E-4
score: 22.0
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 102..156
score: 10.122
IPR008984SMAD/FHA domainSUPERFAMILY49879SMAD/FHA domaincoord: 84..156

Blast
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BLAST of TCONS_00051402-protein vs. Swiss-Prot (Human)
Match: PHF12 (PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 3.591e-57
Identity = 120/233 (51.50%), Postives = 154/233 (66.09%), Query Frame = 0 
Query:   31 LSQLDERLVRILAFQRLQQLVEKKSQQIPK---ISQPGITEKKIHLQTTETKNSIAVLSPLNGLGPACYMRYKSFNTGQGADMDLCLSNYGFCNYVSGKHATIFYDKETRQFELLNYSEHGTIVDNVLYSCDFSEK-PKHNVTSSNAKFDTGSKYLDMQQRRKKP---PIGRTTRGLGTEFITRACNCRASASSLIGGSGAGWEGTAVLHHGSYVKFGCLHFVFSIVECASKE 256
            ++ LDE+L++ LA QR+ QL   + Q  P      Q       I +Q  E + + AV  PL GLG A  M Y++   G GADMD+CL+NYG CNYVSGKHA IFYD+ T+ +ELLNYSEHGT VDNVLYSCDFSEK P    +S  AK  +  +    Q++ ++P       +++  G +   R CNC+AS+SSLIGGSGAGWEGTA+LHHGSY+K GCL FVFSI E A+K+
Sbjct:  742 INMLDEKLIKFLALQRIHQLFPSRVQPSPGSVGTHQLASGGHHIEVQRKEVQ-ARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKHACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQKQDEEPSEEAAMMSSQAQGPQ--RRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQFVFSITEFATKQ 971
The following BLAST results are available for this feature:
BLAST of TCONS_00051402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHF123.591e-5751.50PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=... [more]
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