TCONS_00053503-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053503-protein
Unique NameTCONS_00053503-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053503-protein ID=TCONS_00053503-protein|Name=TCONS_00053503-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MDEVDKIIIHTLRQIGCDISDAVVTIKEFSVELVVQAASKCLFTISEQYN
IPSALPPSMSAKFRIGSSLAAACQDLGYKGDIGYQTFLYANEHELRKVMM
FLIEKLPKESGETIDEPLGKGVLLNRRIAAELKKQLSFPWTPAYCKKRNM
MNSSNNNWFLQGTSSFNPVNTCQLQYPIGMSNPKKISKEDKEAFGQMKYI
CNQPINSRDLYASLAEENSCLVAKEREWEKEWNQSGIMSRLTEQEYKNQK
RERLLKKIKEKLRYNVENETLSNVASGTKLNDLLDAMSGKNNQKSGKGSR
FTHAEKLQFAPDEEVVAARTQQKKEEEEEAQQETEEERQEKREKEIDDLR
NQLNELTERFENTQITIKQLTAQKQQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033775XLOC_033775Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053503TCONS_00053503Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 316..377
NoneNo IPR availablePFAMPF05667DUF812coord: 1..377
e-value: 9.5E-103
score: 345.0
NoneNo IPR availableGENE3D3.40.50.300coord: 13..377
e-value: 5.1E-5
score: 22.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..355

Blast
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BLAST of TCONS_00053503-protein vs. Swiss-Prot (Human)
Match: CCD22 (Coiled-coil domain-containing protein 22 OS=Homo sapiens GN=CCDC22 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 9.576e-53
Identity = 117/376 (31.12%), Postives = 188/376 (50.00%), Query Frame = 0 
Query:    1 MDEVDKIIIHTLRQIGCDISDAVVTIKEFSVELVVQAASKCLFTISEQYN--IPSALPPSMSAKFRIGSSLAAACQDLGYKGDIGYQTFLYANEHELRKVMMFLIEKLPKESGETIDEPLGKGVLLNRRIAAELKKQLSFPWTPAYCKKRNMMNSSNNNWFLQGTSSFNPVNTCQLQYPIGMSNPKKISKEDKEAFGQMKYICNQPINSRDLYASLAEENSCLV----AKEREWEKEWNQSGIMSRLTEQEYKNQKRERLLKKIKEKLRYNVENETLSNVASGTKLNDLLDAMSGKNNQKSGKGSRFTHAEKLQFAPDEEVVAARTQQKKEEEEEAQQETEEERQEKREKEIDDLRNQLNELTERFENTQITIKQL 370
            M+E D+I+IH+LRQ G  +   V T++ F+ ELVV+A  +CL  I+      +   LP +MSA+FR+  SLA AC DLGY  ++GYQ FLY +E +LR +++FL E+LP ++ E  D+P G   +L R I ++++ QL+ PW P + +   + +       LQG++   P +  +L  P   S  +    +       +     QP+      ASL E ++  +     ++R  +++W      SRL  QE    +R+RL K++ E LR +     L        L +LL A        + KGSRFTH+EK  F  + +  A +           +Q T       +E+E++ LR QL  +    E  +  +K L
Sbjct:    1 MEEADRILIHSLRQAGTAVPPDVQTLRAFTTELVVEAVVRCLRVINPAVGSGLSPLLPLAMSARFRLAMSLAQACMDLGYPLELGYQNFLYPSEPDLRDLLLFLAERLPTDASEDADQPAGDSAILLRAIGSQIRDQLALPWVPPHLRTPKLQH-------LQGSALQKPFHASRLVVPELSSRGEPREFQASPLLLPVPTQVPQPVGR---VASLLEHHALQLCQQTGRDRPGDEDWVHR--TSRLPPQEDTRAQRQRLQKQLTEHLRQSW--GLLGAPIQARDLGELLQAWGAGAKTGAPKGSRFTHSEKFTFHLEPQAQATQVSDVPATSRRPEQVT----WAAQEQELESLREQLEGVNRSIEEVEADMKTL 358
The following BLAST results are available for this feature:
BLAST of TCONS_00053503-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD229.576e-5331.12Coiled-coil domain-containing protein 22 OS=Homo s... [more]
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