TCONS_00053593-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053593-protein
Unique NameTCONS_00053593-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length230

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053593-protein ID=TCONS_00053593-protein|Name=TCONS_00053593-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
HYVTGNCCCLQLHRDFGSKMTDKKNECCLCKGPIKNKCTLKCSHNFCRAC
IKKVINHPNQVKCPYCQQDSESSDITLESGEDASILFNVKLTNILGSIYI
QCDTIGLASYHFGTLSNPYISYESPESDEWELDDGSRPCQKKYFEHHHYD
QESRTFTGNIDWTPTKFYGEALWKYTMIFSEDFLTIESGNVQGFKEVNGP
PDGELNIFGEDLVYERVLSADFDSDDANED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033818XLOC_033818Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053593TCONS_00053593Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
IPR001841Znf_RING
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 11..157
e-value: 4.5E-13
score: 48.7
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 27..66
e-value: 6.8E-6
score: 25.8
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 42..51
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 27..67
score: 11.412
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 26..69
e-value: 3.46972E-6
score: 41.6624
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 24..75

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053593-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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