TCONS_00055044-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055044-protein
Unique NameTCONS_00055044-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055044-protein ID=TCONS_00055044-protein|Name=TCONS_00055044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MIIALNNIIRSVLTKELQITYASTRCFSKSGLVSKRYKYALNRAYQKNPG
GSKGKSRKNFIYGDKTVTYFTLQDFDSESDGTEEIYNPKQKVYSEYIEDA
VKDLLSSNEVDETLRNCPIEIVDVEVSDSLASAYIVWKISNEVPSEEKAD
AREKTKSLLSKNLAHIRSLLPAFTSLTNAPNVHFVYDILSERRAELEKLL
DSVKDEIEEFETKNQNIEQEIKQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034673XLOC_034673Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055044TCONS_00055044Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015946KH_dom-like_a/b
IPR000238RbfA
IPR023799RbfA_dom
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..224
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 87..207
e-value: 4.2E-14
score: 52.0
IPR000238Ribosome-binding factor APFAMPF02033RBFAcoord: 91..200
e-value: 3.1E-10
score: 40.4
IPR023799Ribosome-binding factor A domainSUPERFAMILY89919Ribosome-binding factor A, RbfAcoord: 87..203

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055044-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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