TCONS_00056713-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056713-protein
Unique NameTCONS_00056713-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056713-protein ID=TCONS_00056713-protein|Name=TCONS_00056713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
IKINMSKRSNLLPELSEVGQDDAFLDSDDEVALPTNGLPLNDARHKIKAV
RKLKQIKKENVKLKQQIELQQVLLHAHVQNLGQLLGNPQHAHMQHANSQH
SNMQQVNMQHANMQHANMQQVNMQHANMQHANMQHANMQHANMQHANLQH
ANSQHSNMQHVNNNNNIIPNAMIPPVLPHSGQCVRIPMAIPIQYPYQYQF
FG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035730XLOC_035730Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056713TCONS_00056713Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..73
NoneNo IPR availableGENE3D3.30.1120.50coord: 87..123
e-value: 4.9E-6
score: 25.3
coord: 124..173
e-value: 5.5E-11
score: 41.2
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 89..168
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 116..152
e-value: 4.3E-10
score: 38.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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