TCONS_00057030-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057030-protein
Unique NameTCONS_00057030-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length761

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057030-protein ID=TCONS_00057030-protein|Name=TCONS_00057030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=761bp
IHPDHQIIRSRHEVLNEETLYMYGGFVDYYKLNVDITEPNSYPNIVSQRR
EGICKQIEIFQIEIPQIEILHNDEHKPKKTMEFKMKPDLTMKDLKKKIGK
SNKLDGDFIVLSSKKSPGVLLDDEQLLADLLLDLDEGESLELNLNMMEQK
PFRNSHSHHMLQLVRLELPYSDSNRYSKVDYPYLEIGLLGISALKSWVEA
NYEIPCAEQLPTLKDLLKKCEIIESETFPEHLCNKIRLGCIQVKLFVYST
SDKNLTSLYQKLGVQTILPVNVSGFGTSNILQYHYRKGKEKLDVFIENSL
QIPKLKQRLFVHGCRVTANDIEKFFLSERDSRKFEIVQNNYMIEGEGNLD
ENLKVLPVKLVVQVDDPKTELSERAKQIGLSCIRSVVIKHPDPENPTIFY
DCPLSKLEGLLETNEKELKRLLAEQHQDISPEDVCLLHNRDSITSTKNIE
GLFIEGDSIQETLELTLEXEDISAEDVCLLHNRDSITSTKNIEDLFIEGD
SIQETLELTLEIKPNEDEGMQRFCQKYDLSPYKQVIIKFLTGEFSFDILS
GANTTIGQIKDEIYKAKSIPIHLQQLYHENIEVPNDAQNSTFIAQMTMIS
GKPITLNLIVKPAQTFKIYVKKGNFINEQLEIEILETATILDLKEEISVR
SGVPSKLIKIFRDRCFDDDSQPLWDCDFHEKHYEIFVHKIVIVLIDDGGV
VEREHYIIKNETETLGNLHENISRRYFCNVSLKSKGLKSNTLLNDLGETE
ITFVVTNRICS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035925XLOC_035925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057030TCONS_00057030Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availableGENE3D3.10.20.90coord: 62..150
e-value: 0.004
score: 16.4
NoneNo IPR availableGENE3D3.10.20.90coord: 613..692
e-value: 1.0E-5
score: 24.6
NoneNo IPR availableGENE3D3.10.20.90coord: 534..612
e-value: 4.3E-4
score: 19.7
NoneNo IPR availableCDDcd01769UBLcoord: 630..682
e-value: 3.15349E-4
score: 38.4022
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 616..680
score: 8.807
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 607..682
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 521..584

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057030-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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