|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060136-protein ID=TCONS_00060136-protein|Name=ankyrin repeat protein Diego|organism=Clytia hemisphaerica|type=polypeptide|length=1145bp
MTVLESQNTTNISNGFHDGFGDETFGNQSQSSPLHVHAFNGNKKLLQDAL
QSKEYGVDDIDSTGRTPLIYSVLVEQIDCFNLLLKHGADIDKPDTDGRTC
LHWAAYQGNHKLVKLVLSKCKNRTSRDKEGQTPLHLAISHDNLRVMQIIL
KHLNEHEVDATDNRGMTALCWSVHYERIEHVELLLRYGSDVHVLDNERRG
ILHWTSQNKDPVLIKRLLEKGCKGLGFPDQKGRTVLHMAVGQGNQAIIEY
LLTISDIPVNQTDEIQRTPLHWAAVLGHTAIVELLLNSGADYSLADNNGV
RPLHYAVQNNHRDVVATMIRTGRVTDEPDKDQRTALMWAALKGHMNVLKV
LLEGKNVNINAVDINKQTALHMSCQTGNLECVQLLIQHKADVNMMDQQQH
TPLFYACASGHGQIVTKLLQQDDQRNLHQCDLEGRTPLHYSAMVDRREIV
NNLLQHGLDPNAQDNSGCPPLHIAAYGGNVHCMNVLLENNAQVNMQDNSG
STALHLACRSGNLDAVKLLVSRYRANMNIFDGSEEKLTCLDYAILNDHQD
VSFFLTENGANTISTLHDLSLKIQTNWRGYSARKRYAELKRKMNISTSIP
KRRLTNLTTTSLGDNTLKVGTLPPVSPTHAVLPHKANSHIGIPTARYRSN
TQVSHTSNVSDSRQGPKFIEGNAANPFSLNRVARVKSPGTEMXPFSLNRV
ARVKSPGTEMRVPNSSRSKSSTGVMPPYRPNNLPPPKRMNSTGKMGSRNH
IFSLSSKSSTTSSSDYFFAKNEKTFIEPKKPPTIHIQPQQPAHDHLIQYE
GRTSARVAPSEKTSVQYRPVPFISLPNDEQPDIMHEDVQPSPPRRFLPQP
PSRPSTGASNSNIEDGGNKPWHIYRRDQKRIHIIRLKTEAAIKIQSVFRG
YRARRVVRFLNRNDKQYLDVNRSELSDFSTLGSESDSYLSMDSEIPDDDT
LREIAALVIQVAWRQYVKLKLLNRASSEEHIIPESNTTNEQLNSSSVDFK
KRKLSQSDLGSSITSSNGSEVHSKDVMSRTKSKTIESQSIDLISQDVIGA
EVSSKRKSSKRRNKAKLAPSSSFPLMENIYRENVRVKRTKKLSIKSRLLQ
RQSTVTETDFKTRPLSLRDGIEQFSKEDIEALKNGKPKLFLNSKE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 130..145
score: 37.84
coord: 281..295
score: 40.3 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 197..227
e-value: 1500.0
score: 3.8
coord: 231..261
e-value: 0.44
score: 19.6
coord: 164..193
e-value: 0.03
score: 23.5
coord: 535..565
e-value: 150.0
score: 11.1
coord: 96..125
e-value: 1.5E-4
score: 31.1
coord: 298..327
e-value: 0.063
score: 22.4
coord: 331..361
e-value: 2.6E-4
score: 30.3
coord: 398..427
e-value: 2.5
score: 17.1
coord: 129..160
e-value: 0.0028
score: 26.9
coord: 433..462
e-value: 1.4E-5
score: 34.6
coord: 466..495
e-value: 1.3E-4
score: 31.3
coord: 29..59
e-value: 1200.0
score: 4.4
coord: 365..394
e-value: 5.1E-7
score: 39.3
coord: 265..294
e-value: 0.0025
score: 27.0
coord: 499..529
e-value: 2.4E-5
score: 33.8
coord: 63..92
e-value: 0.0012
score: 28.1 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 433..465
score: 13.678 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 63..95
score: 10.953 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 265..297
score: 13.464 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 164..196
score: 9.831 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 466..498
score: 12.476 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 129..152
score: 9.751 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 231..252
score: 9.164 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 298..330
score: 10.366 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 365..397
score: 12.743 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 499..522
score: 10.312 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 96..128
score: 10.179 |
| IPR000048 | IQ motif, EF-hand binding site | SMART | SM00015 | iq_5 | coord: 886..908
e-value: 0.002
score: 27.4
coord: 565..587
e-value: 0.013
score: 24.7 |
| IPR000048 | IQ motif, EF-hand binding site | PFAM | PF00612 | IQ | coord: 571..586
e-value: 0.0013
score: 18.2
coord: 888..907
e-value: 1.0E-5
score: 24.8 |
| IPR000048 | IQ motif, EF-hand binding site | PROSITE | PS50096 | IQ | coord: 566..594
score: 9.56 |
| IPR000048 | IQ motif, EF-hand binding site | PROSITE | PS50096 | IQ | coord: 887..916
score: 10.548 |
| None | No IPR available | GENE3D | 1.20.5.190 | | coord: 568..897
e-value: 3.3E-11
score: 42.4
coord: 898..972
e-value: 7.9E-9
score: 34.8 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 125..252
e-value: 1.89289E-28
score: 111.321 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 360..520
e-value: 1.28297E-37
score: 137.9 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 58..185
e-value: 1.02325E-34
score: 129.426 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 260..386
e-value: 1.092E-36
score: 135.204 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 241..343
e-value: 9.5E-35
score: 119.3 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 370..464
e-value: 7.5E-17
score: 61.6
coord: 298..360
e-value: 2.9E-11
score: 43.7
coord: 101..193
e-value: 2.4E-15
score: 56.8
coord: 202..295
e-value: 3.7E-15
score: 56.2
coord: 471..561
e-value: 1.9E-14
score: 53.9 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 410..491
e-value: 1.1E-30
score: 105.6 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 140..240
e-value: 1.8E-28
score: 98.7 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 492..567
e-value: 6.3E-18
score: 64.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 4..139
e-value: 8.3E-33
score: 112.9 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 344..409
e-value: 4.4E-25
score: 87.2 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 29..561
score: 124.158 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 28..353 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 268..562 |
Blast
BLAST of ankyrin repeat protein Diego vs. Swiss-Prot (Human)
Match: INVS (Inversin OS=Homo sapiens GN=INVS PE=1 SV=2) HSP 1 Score: 417.157 bits (1071), Expect = 1.270e-127 Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = 0
Query: 25 FGNQSQSSPLHVHAFNGNKKLLQDALQSKEYGVDDIDSTGRTPLIYSVLVEQIDCFNLLLKHGADIDKPDTDGRTCLHWAAYQGNHKLVKLVLSKCKNRTSRDKEGQTPLHLAISHDNLRVMQIILKHLNEHEVDATDNRGMTALCWSVHYERIEHVELLLRYGSDVHVLDNERRGILHWTSQNKDPVL---IKRLLEKGCKG--LGFPDQKGRTVLHMAVGQGNQAIIEYLLTISDIPVNQTDEIQRTPLHWAAVLGHTAIVELLLNSGADYSL-ADNNGVRPLHYAVQNNHRDVVATMIRTGRVTDEPDKDQRTALMWAALKGHMNVLKVLLEGK-NVNINAVDINKQTALHMSCQTGNLECVQLLIQHKADVNMMDQQQHTPLFYACASGHGQIVTKLLQQDDQRNLHQCDLEGRTPLHYSAMVDRREIVNNLLQHGLDPNAQDNSGCPPLHIAAYGGNVHCMNVLLENNAQVNMQDNSGSTALHLACRSGNLDAVKLLVSRYRANMNIFDGSEEKLTCLDYAILNDHQDVSFFLTENGANTISTLHDL-SLKIQTNWRGYSARKRYAELK 590
F S +S +H A NG+K LQ + D D GRTPL+Y VL +++DC + LLK GAD++K D RT LH AA +GN++ +KL+L++ N +D E TPLHL H + + + ++LK + EVD D TAL WS +Y EHV+LL+++ S++ + D E + LHW + +KDP ++ +L+ L + D +GRT LH AV GN +++ L + + D + RTPLHWAA+LGH IV LLL ++ +D+ G PLHYA Q+N + V ++ V D+ D + RT+ MWAA KG +VL+ +L K +++IN D TALH + +G++ V+LL+++ A V+ D +HTPLF AC GH ++ L++ + +L D +G + LH++A+ ++ L+++ ++PN QD +G PL AAYGG ++CM VL+ENNA N+QD G TALH +C +G LDA+KLL+ + A N + +EE+ T LDYA+L + +V F+ E+GA +I+ + D+ + KIQ ++GY RK + + K
Sbjct: 9 FAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADRLDCADALLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHRSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTALHAAALSGHVSTVKLLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDL--VDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLD-FAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRK 579
The following BLAST results are available for this feature:
|
