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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060136 ID=TCONS_00060136|Name=TCONS_00060136|organism=Clytia hemisphaerica|type=transcript|length=4006bp
cTCCTGCAAAATTCGCTCACTTCAGAGAAGATGTTCAAAAAAAGTATAGC
TTGAATTGACAAGATTAAACTAGTAcaaatcttaacttttttcACCATTG
AAAAGGTGAAAAGAATTTGCTTACCGTGTTCAAAAGTTAATCGTGAAAAT
CTTCATTAAGCGCGACAAAAATAAGACTCGGTGTATTATTATCACAGTGA
ATGCATCAATAGAAAAATTCATATCAAAATACTAAATATACAAATCTATT
CTTTCgagtttaaaaataattttggttTTCCGTTTTTCAATGCTTCGATA
TCTTCCTTACTGAACTGTTCAATACCGTCTCTGAGAGAGAGCGGCCTCGT
TTTGAAGTCAGTCTCGGTTACTGTGGACTGTCTTTGTAACAAACGGCTCT
TAATGGATAGTTTCTTTGTGCGTTTTACTCGCACGTTTTCACGGTAAATA
TTTTCCATCAAAGGGAAGGAAGATGAAGGAGCCAGTTTGGCTTTATTTCT
CCGCTTACTACTCTTCCGTTTAGAACTCACTTCCGCACCAATAACATCTT
GCGAAATCAAGTCTAtagattgagattcgattgttTTACTTTTCGTTCTA
CTCATGACGTCCTTCGAGTGAACCTCACTTCCATTCGATGAAGTAATAGA
ACTTCCTAGATCACTTTGAGaaagttttcgttttttaaaGTCAACAGATG
AAGAGTTCAGTTGCTCATTAGTAGTATTGCTTTCAGGTATAATATGTTCT
TCTGAACTTGCTCTGttcaaaagtttcaatttgACATACTGTCTCCATGC
TACTTGTATTACTAAAGCAGCAATTTCGCGTAAAGTATCATCGTCTGGAA
TTTCAGAATCCATACTAAGATAGCTGTCTGATTCTGAACCCAAAGTCGAA
AAGTCTGACAGTTCCGATCTATTCACGTCGAGGTATTGCTTATCATTTCT
ATTCAAGAAACGGACAACACGCCTTGCACGGTAACCACGAAAAACGGATT
GTATTTTGATGGCAGCCTCTGTTTTCAATCGAATGATGTGTATTCGTTTT
TGGTCTCTTCGATAAATATGCCATGGTTTGTTGCCACCATCTTCGATGTT
TGAATTACTGGCGCCTGTGCTCGGTCGTGAAGGAGGTTGTGGTAGGAAGC
GTCGTGGTGGTGAAGGTTGCACATCTTCGTGCATGATGTCGGGCTGTTCA
TCGTTTGGCAGCGAGATAAAAGGTACCGGTCGATATTGAACGGATGTTTT
CTCAGAAGGTGCGACACGGGCTGAAGTTCGCCCTTCATATTGGATTAAAT
GATCGTGCGCCGGCTGTTGAGGTTGAATGTGTATCGTTGGAGGTTTTTTT
GGTTCAATGAATGTCTTCtcgtttttagcaaaaaagtaaTCACTCGAGCT
TGTCGTGCTACTCTTAGATGATAAACTGAAGATGTGATTTCTAGATCCCA
TTTTTCCCGTAGAGTTCATGCGTTTAGGGGGCGGTAGATTATTTGGTCTA
TATGGTGGCATCACGCCAGTGCTGCTTTTAGATCGCGATGAGTTTGGAAC
TCGCATTTCAGTGCCCGGACTTTTGACACGAGCTACACGATTAAGTGAAA
ATGGANGCATTTCAGTGCCCGGACTTTTGACACGAGCTACACGGTTAAGT
GAAAATGGGTTTGCAGCATTTCCTTCGATAAATTTGGGACCTTGTCTCGA
ATCTGAGACGTTGGAGGTATGGCTGACTTGAGTGTTTGAGCGATATCGTG
CGGTAGGTATACCAATGTGGGAGTTTGCTTTGTGAGGAAGGACGGCGTGA
GTTGGGGAGACGGGAGGAAGCGTACCAACTTTCAAAGTATTATCTCCCAG
TGAAGTGGTGGTCAAATTGGTAAGTCGCCTCTTTGGAATAGAAGTGGaaa
tgttcattttccttttcagtTCTGCATATCTTTTACGAGCAGAGTAACCA
CGCCAATTAGTCTGAATCTTTAACGACAAATCATGTAGCGTCGATATTGT
ATTGGCGCCATTTTCCGTTAAGAAGAAAGAAACGTCCTGGTGGTCATTCA
GAATAGCATAATCTAAACAAGTCAATTTCTCCTCGCTCCCATCGAAAATG
TTCATATTTGCGCGATAACGAGAAACAAGCAGCTTTACGGCGTCCAAATT
GCCCGATCGACACGCCAAATGAAGAGCTGTAGAACCGCTATTATCTTGCA
TGTTAACTTGAGCGTTGTTTTCCAGTAACACGTTCATGCAATGCACGTTT
CCACCATACGCCGCGATGTGAAGAGGTGGACAACCCGAATTATCTTGAGC
GTTTGGGTCGAGGCCATGTTGGAGAAGATTGTTGACGATTTCCCTTCGAT
CGACCATTGCTGAATAATGAAGCGGTGTTCGACCTTCTAAATCACACTGG
TGGAGATTTCGCTGATCGTCTTGTTGTAATAGTTTAGTGACAATCTGACC
ATGACCTGATGCGCATGCGTAAAAAAGAGGTGTGTGTTGTTGCTGGTCCA
TCATGTTGACGTCTGCTTTATGCTGGATCAACAACTGCACGCACTCCAGG
TTTCCTGTCTGACAACTCATATGAAGAGCTGTTTGTTTGTTAATGTCTAC
CGCGTTGATGTTTACATTCTTGCCTTCGAGAAGGACTTTTAAAACGTTCA
TGTGTCCTTTTAAAGCAGCCCACATCAAAGCTGTTCGTTGGTCTTTGTCC
GGTTCATCTGTCACCCGGCCTGTTCGTATCATGGTGGCCACCACATCCCT
GTGATTGTTCTGTACGGCGTAATGGAGTGGCCTCACGCCGTTGTTGTCAG
CCAGTGAATAATCAGCACCACTGTTTAGTAATAATTCAACTATAGCAGTG
TGACCAAGCACTGCTGCCCAATGCAAGGGCGTCCTTTGTATTTCGTCTGT
TTGATTGACAGGAATGTCACTAATTGTCAATAAATATTCGATGATGGCTT
GATTCCCTTGACCAACAGCCATGTGGAGAACAGTTCGACCTTTTTGATCA
GGAAAACCGAGCCCTTTGCAACCCTTCTCCAATAAACGTTTAATCAGAAC
GGGATCTTTATTTTGGCTGGTCCAATGTAGGATTCCCCTCCGTTCGTTAT
CTAACACGTGGACATCGGAACCATACCGTAACAAGAGTTCCACATGTTCG
ATTCGTTCGTAATGTACACTCCAACAGAGTGCCGTCATTCCTCGGTTATC
GGTAGCGTCTACCTCGTGCTCGTTTAAATGTTTCAAGATGATCTGCATAA
CACGCAAATTGTCGTGGCTGATCGCTAGGTGAAGTGGTGTCTGACCCTCT
TTATCACGACTTGTTCGATTCTTACATTTCGAAAGAACAAGTTTGACAAG
TTTGTGATTCCCTTGATAGGCAGCCCAGTGCAAGCAGGTTCGTCCGTCAG
TGTCTGGTTTATCAATATCAGCTCCATGCTTAAGCAACAAGTTAAAACAG
TCTATTTGCTCCACAAGAACGCTGTAGATGAGAGGCGTTCGACCTGTGGA
GTCGATATCATCCACACCATACTCTTTGCTCTGCAAAGCGTCTTGTAAAA
GTTTCTTATTTCCATTGAAGGCGTGAACGTGAAGGGGCGAAGATTGTGAT
TGGTTACCGAAAGTTTCGTCACCAAAGCCATCATGGAAACCATTCGAAAT
GTTGGTGGTGTTCTGACTTTCCAAAACTGTCATCTTCCAACAAACATaat
tctgatttatttttcttgtctaAATGATAATAAAGAATTTTAAGTGAAAA
CCAACCATGATACAGAAAAAGAATTCCTTCTATTTGACCTGACCAAAATG
ACCTGAACAAAACAAAACCAATTTTCTTATGATGTGTTTGGTTTAAGACA
AAGTGCAATATCATGAGAGGGTGATGCATACCACCTTTGACCTGCAGATG
ATATGTTTTTCATATTAATAATTGAAATGGCTTATACGTACTTCCCAAAC
AAATTGAGTTCAAGTTGTCATTAAGAGTGTTTATTTTGTGTTGCTACGCG
ACAATG Run BLAST on NCBI protein sequence of ankyrin repeat protein Diego >TCONS_00060136-protein ID=TCONS_00060136-protein|Name=ankyrin repeat protein Diego|organism=Clytia hemisphaerica|type=polypeptide|length=1145bp
MTVLESQNTTNISNGFHDGFGDETFGNQSQSSPLHVHAFNGNKKLLQDAL
QSKEYGVDDIDSTGRTPLIYSVLVEQIDCFNLLLKHGADIDKPDTDGRTC
LHWAAYQGNHKLVKLVLSKCKNRTSRDKEGQTPLHLAISHDNLRVMQIIL
KHLNEHEVDATDNRGMTALCWSVHYERIEHVELLLRYGSDVHVLDNERRG
ILHWTSQNKDPVLIKRLLEKGCKGLGFPDQKGRTVLHMAVGQGNQAIIEY
LLTISDIPVNQTDEIQRTPLHWAAVLGHTAIVELLLNSGADYSLADNNGV
RPLHYAVQNNHRDVVATMIRTGRVTDEPDKDQRTALMWAALKGHMNVLKV
LLEGKNVNINAVDINKQTALHMSCQTGNLECVQLLIQHKADVNMMDQQQH
TPLFYACASGHGQIVTKLLQQDDQRNLHQCDLEGRTPLHYSAMVDRREIV
NNLLQHGLDPNAQDNSGCPPLHIAAYGGNVHCMNVLLENNAQVNMQDNSG
STALHLACRSGNLDAVKLLVSRYRANMNIFDGSEEKLTCLDYAILNDHQD
VSFFLTENGANTISTLHDLSLKIQTNWRGYSARKRYAELKRKMNISTSIP
KRRLTNLTTTSLGDNTLKVGTLPPVSPTHAVLPHKANSHIGIPTARYRSN
TQVSHTSNVSDSRQGPKFIEGNAANPFSLNRVARVKSPGTEMXPFSLNRV
ARVKSPGTEMRVPNSSRSKSSTGVMPPYRPNNLPPPKRMNSTGKMGSRNH
IFSLSSKSSTTSSSDYFFAKNEKTFIEPKKPPTIHIQPQQPAHDHLIQYE
GRTSARVAPSEKTSVQYRPVPFISLPNDEQPDIMHEDVQPSPPRRFLPQP
PSRPSTGASNSNIEDGGNKPWHIYRRDQKRIHIIRLKTEAAIKIQSVFRG
YRARRVVRFLNRNDKQYLDVNRSELSDFSTLGSESDSYLSMDSEIPDDDT
LREIAALVIQVAWRQYVKLKLLNRASSEEHIIPESNTTNEQLNSSSVDFK
KRKLSQSDLGSSITSSNGSEVHSKDVMSRTKSKTIESQSIDLISQDVIGA
EVSSKRKSSKRRNKAKLAPSSSFPLMENIYRENVRVKRTKKLSIKSRLLQ
RQSTVTETDFKTRPLSLRDGIEQFSKEDIEALKNGKPKLFLNSKE Run BLAST on NCBI transcript from alignment at scaffold_334:227490..231495 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060136 ID=TCONS_00060136|Name=TCONS_00060136|organism=Clytia hemisphaerica|type=transcript|length=4006bp|location=Sequence derived from alignment at scaffold_334:227490..231495 (Clytia hemisphaerica)
CATTGTCGCGTAGCAACACAAAATAAACACTCTTAATGACAACTTGAACT
CAATTTGTTTGGGAAGTACGTATAAGCCATTTCAATTATTAATATGAAAA
ACATATCATCTGCAGGTCAAAGGTGGTATGCATCACCCTCTCATGATATT
GCACTTTGTCTTAAACCAAACACATCATAAGAAAATTGGTTTTGTTTTGT
TCAGGTCATTTTGGTCAGGTCAAATAGAAGGAATTCTTTTTCTGTATCAT
GGTTGGTTTTCACTTAAAATTCTTTATTATCATTtagacaagaaaaataa
atcagaattATGTTTGTTGGAAGATGACAGTTTTGGAAAGTCAGAACACC
ACCAACATTTCGAATGGTTTCCATGATGGCTTTGGTGACGAAACTTTCGG
TAACCAATCACAATCTTCGCCCCTTCACGTTCACGCCTTCAATGGAAATA
AGAAACTTTTACAAGACGCTTTGCAGAGCAAAGAGTATGGTGTGGATGAT
ATCGACTCCACAGGTCGAACGCCTCTCATCTACAGCGTTCTTGTGGAGCA
AATAGACTGTTTTAACTTGTTGCTTAAGCATGGAGCTGATATTGATAAAC
CAGACACTGACGGACGAACCTGCTTGCACTGGGCTGCCTATCAAGGGAAT
CACAAACTTGTCAAACTTGTTCTTTCGAAATGTAAGAATCGAACAAGTCG
TGATAAAGAGGGTCAGACACCACTTCACCTAGCGATCAGCCACGACAATT
TGCGTGTTATGCAGATCATCTTGAAACATTTAAACGAGCACGAGGTAGAC
GCTACCGATAACCGAGGAATGACGGCACTCTGTTGGAGTGTACATTACGA
ACGAATCGAACATGTGGAACTCTTGTTACGGTATGGTTCCGATGTCCACG
TGTTAGATAACGAACGGAGGGGAATCCTACATTGGACCAGCCAAAATAAA
GATCCCGTTCTGATTAAACGTTTATTGGAGAAGGGTTGCAAAGGGCTCGG
TTTTCCTGATCAAAAAGGTCGAACTGTTCTCCACATGGCTGTTGGTCAAG
GGAATCAAGCCATCATCGAATATTTATTGACAATTAGTGACATTCCTGTC
AATCAAACAGACGAAATACAAAGGACGCCCTTGCATTGGGCAGCAGTGCT
TGGTCACACTGCTATAGTTGAATTATTACTAAACAGTGGTGCTGATTATT
CACTGGCTGACAACAACGGCGTGAGGCCACTCCATTACGCCGTACAGAAC
AATCACAGGGATGTGGTGGCCACCATGATACGAACAGGCCGGGTGACAGA
TGAACCGGACAAAGACCAACGAACAGCTTTGATGTGGGCTGCTTTAAAAG
GACACATGAACGTTTTAAAAGTCCTTCTCGAAGGCAAGAATGTAAACATC
AACGCGGTAGACATTAACAAACAAACAGCTCTTCATATGAGTTGTCAGAC
AGGAAACCTGGAGTGCGTGCAGTTGTTGATCCAGCATAAAGCAGACGTCA
ACATGATGGACCAGCAACAACACACACCTCTTTTTTACGCATGCGCATCA
GGTCATGGTCAGATTGTCACTAAACTATTACAACAAGACGATCAGCGAAA
TCTCCACCAGTGTGATTTAGAAGGTCGAACACCGCTTCATTATTCAGCAA
TGGTCGATCGAAGGGAAATCGTCAACAATCTTCTCCAACATGGCCTCGAC
CCAAACGCTCAAGATAATTCGGGTTGTCCACCTCTTCACATCGCGGCGTA
TGGTGGAAACGTGCATTGCATGAACGTGTTACTGGAAAACAACGCTCAAG
TTAACATGCAAGATAATAGCGGTTCTACAGCTCTTCATTTGGCGTGTCGA
TCGGGCAATTTGGACGCCGTAAAGCTGCTTGTTTCTCGTTATCGCGCAAA
TATGAACATTTTCGATGGGAGCGAGGAGAAATTGACTTGTTTAGATTATG
CTATTCTGAATGACCACCAGGACGTTTCTTTCTTCTTAACGGAAAATGGC
GCCAATACAATATCGACGCTACATGATTTGTCGTTAAAGATTCAGACTAA
TTGGCGTGGTTACTCTGCTCGTAAAAGATATGCAGAactgaaaaggaaaa
tgaacatttCCACTTCTATTCCAAAGAGGCGACTTACCAATTTGACCACC
ACTTCACTGGGAGATAATACTTTGAAAGTTGGTACGCTTCCTCCCGTCTC
CCCAACTCACGCCGTCCTTCCTCACAAAGCAAACTCCCACATTGGTATAC
CTACCGCACGATATCGCTCAAACACTCAAGTCAGCCATACCTCCAACGTC
TCAGATTCGAGACAAGGTCCCAAATTTATCGAAGGAAATGCTGCAAACCC
ATTTTCACTTAACCGTGTAGCTCGTGTCAAAAGTCCGGGCACTGAAATGC
NTCCATTTTCACTTAATCGTGTAGCTCGTGTCAAAAGTCCGGGCACTGAA
ATGCGAGTTCCAAACTCATCGCGATCTAAAAGCAGCACTGGCGTGATGCC
ACCATATAGACCAAATAATCTACCGCCCCCTAAACGCATGAACTCTACGG
GAAAAATGGGATCTAGAAATCACATCTTCAGTTTATCATCTAAGAGTAGC
ACGACAAGCTCGAGTGAttacttttttgctaaaaacgaGAAGACATTCAT
TGAACCAAAAAAACCTCCAACGATACACATTCAACCTCAACAGCCGGCGC
ACGATCATTTAATCCAATATGAAGGGCGAACTTCAGCCCGTGTCGCACCT
TCTGAGAAAACATCCGTTCAATATCGACCGGTACCTTTTATCTCGCTGCC
AAACGATGAACAGCCCGACATCATGCACGAAGATGTGCAACCTTCACCAC
CACGACGCTTCCTACCACAACCTCCTTCACGACCGAGCACAGGCGCCAGT
AATTCAAACATCGAAGATGGTGGCAACAAACCATGGCATATTTATCGAAG
AGACCAAAAACGAATACACATCATTCGATTGAAAACAGAGGCTGCCATCA
AAATACAATCCGTTTTTCGTGGTTACCGTGCAAGGCGTGTTGTCCGTTTC
TTGAATAGAAATGATAAGCAATACCTCGACGTGAATAGATCGGAACTGTC
AGACTTTTCGACTTTGGGTTCAGAATCAGACAGCTATCTTAGTATGGATT
CTGAAATTCCAGACGATGATACTTTACGCGAAATTGCTGCTTTAGTAATA
CAAGTAGCATGGAGACAGTATGTcaaattgaaacttttgaaCAGAGCAAG
TTCAGAAGAACATATTATACCTGAAAGCAATACTACTAATGAGCAACTGA
ACTCTTCATCTGTTGACtttaaaaaacgaaaactttCTCAAAGTGATCTA
GGAAGTTCTATTACTTCATCGAATGGAAGTGAGGTTCACTCGAAGGACGT
CATGAGTAGAACGAAAAGTAAaacaatcgaatctcaatctaTAGACTTGA
TTTCGCAAGATGTTATTGGTGCGGAAGTGAGTTCTAAACGGAAGAGTAGT
AAGCGGAGAAATAAAGCCAAACTGGCTCCTTCATCTTCCTTCCCTTTGAT
GGAAAATATTTACCGTGAAAACGTGCGAGTAAAACGCACAAAGAAACTAT
CCATTAAGAGCCGTTTGTTACAAAGACAGTCCACAGTAACCGAGACTGAC
TTCAAAACGAGGCCGCTCTCTCTCAGAGACGGTATTGAACAGTTCAGTAA
GGAAGATATCGAAGCATTGAAAAACGGAAaaccaaaattatttttaaact
cGAAAGAATAGATTTGTATATTTAGTATTTTGATATGAATTTTTCTATTG
ATGCATTCACTGTGATAATAATACACCGAGTCTTATTTTTGTCGCGCTTA
ATGAAGATTTTCACGATTAACTTTTGAACACGGTAAGCAAATTCTTTTCA
CCTTTTCAATGGTgaaaaaagttaagatttgTACTAGTTTAATCTTGTCA
ATTCAAGCTATACTTTTTTTGAACATCTTCTCTGAAGTGAGCGAATTTTG
CAGGAg Coding sequence (CDS) from alignment at scaffold_334:227490..231495 >TCONS_00060136 ID=TCONS_00060136|Name=TCONS_00060136|organism=Clytia hemisphaerica|type=CDS|length=3438bp|location=Sequence derived from alignment at scaffold_334:227490..231495 (Clytia hemisphaerica)
ATGACAGTTTTGGAAAGTCAGAACACCACCAACATTTCGAATGGTTTCCA
TGATGGCTTTGGTGACGAAACTTTCGGTAACCAATCACAATCTTCGCCCC
TTCACGTTCACGCCTTCAATGGAAATAAGAAACTTTTACAAGACGCTTTG
CAGAGCAAAGAGTATGGTGTGGATGATATCGACTCCACAGGTCGAACGCC
TCTCATCTACAGCGTTCTTGTGGAGCAAATAGACTGTTTTAACTTGTTGC
TTAAGCATGGAGCTGATATTGATAAACCAGACACTGACGGACGAACCTGC
TTGCACTGGGCTGCCTATCAAGGGAATCACAAACTTGTCAAACTTGTTCT
TTCGAAATGTAAGAATCGAACAAGTCGTGATAAAGAGGGTCAGACACCAC
TTCACCTAGCGATCAGCCACGACAATTTGCGTGTTATGCAGATCATCTTG
AAACATTTAAACGAGCACGAGGTAGACGCTACCGATAACCGAGGAATGAC
GGCACTCTGTTGGAGTGTACATTACGAACGAATCGAACATGTGGAACTCT
TGTTACGGTATGGTTCCGATGTCCACGTGTTAGATAACGAACGGAGGGGA
ATCCTACATTGGACCAGCCAAAATAAAGATCCCGTTCTGATTAAACGTTT
ATTGGAGAAGGGTTGCAAAGGGCTCGGTTTTCCTGATCAAAAAGGTCGAA
CTGTTCTCCACATGGCTGTTGGTCAAGGGAATCAAGCCATCATCGAATAT
TTATTGACAATTAGTGACATTCCTGTCAATCAAACAGACGAAATACAAAG
GACGCCCTTGCATTGGGCAGCAGTGCTTGGTCACACTGCTATAGTTGAAT
TATTACTAAACAGTGGTGCTGATTATTCACTGGCTGACAACAACGGCGTG
AGGCCACTCCATTACGCCGTACAGAACAATCACAGGGATGTGGTGGCCAC
CATGATACGAACAGGCCGGGTGACAGATGAACCGGACAAAGACCAACGAA
CAGCTTTGATGTGGGCTGCTTTAAAAGGACACATGAACGTTTTAAAAGTC
CTTCTCGAAGGCAAGAATGTAAACATCAACGCGGTAGACATTAACAAACA
AACAGCTCTTCATATGAGTTGTCAGACAGGAAACCTGGAGTGCGTGCAGT
TGTTGATCCAGCATAAAGCAGACGTCAACATGATGGACCAGCAACAACAC
ACACCTCTTTTTTACGCATGCGCATCAGGTCATGGTCAGATTGTCACTAA
ACTATTACAACAAGACGATCAGCGAAATCTCCACCAGTGTGATTTAGAAG
GTCGAACACCGCTTCATTATTCAGCAATGGTCGATCGAAGGGAAATCGTC
AACAATCTTCTCCAACATGGCCTCGACCCAAACGCTCAAGATAATTCGGG
TTGTCCACCTCTTCACATCGCGGCGTATGGTGGAAACGTGCATTGCATGA
ACGTGTTACTGGAAAACAACGCTCAAGTTAACATGCAAGATAATAGCGGT
TCTACAGCTCTTCATTTGGCGTGTCGATCGGGCAATTTGGACGCCGTAAA
GCTGCTTGTTTCTCGTTATCGCGCAAATATGAACATTTTCGATGGGAGCG
AGGAGAAATTGACTTGTTTAGATTATGCTATTCTGAATGACCACCAGGAC
GTTTCTTTCTTCTTAACGGAAAATGGCGCCAATACAATATCGACGCTACA
TGATTTGTCGTTAAAGATTCAGACTAATTGGCGTGGTTACTCTGCTCGTA
AAAGATATGCAGAactgaaaaggaaaatgaacatttCCACTTCTATTCCA
AAGAGGCGACTTACCAATTTGACCACCACTTCACTGGGAGATAATACTTT
GAAAGTTGGTACGCTTCCTCCCGTCTCCCCAACTCACGCCGTCCTTCCTC
ACAAAGCAAACTCCCACATTGGTATACCTACCGCACGATATCGCTCAAAC
ACTCAAGTCAGCCATACCTCCAACGTCTCAGATTCGAGACAAGGTCCCAA
ATTTATCGAAGGAAATGCTGCAAACCCATTTTCACTTAACCGTGTAGCTC
GTGTCAAAAGTCCGGGCACTGAAATGCNTCCATTTTCACTTAATCGTGTA
GCTCGTGTCAAAAGTCCGGGCACTGAAATGCGAGTTCCAAACTCATCGCG
ATCTAAAAGCAGCACTGGCGTGATGCCACCATATAGACCAAATAATCTAC
CGCCCCCTAAACGCATGAACTCTACGGGAAAAATGGGATCTAGAAATCAC
ATCTTCAGTTTATCATCTAAGAGTAGCACGACAAGCTCGAGTGAttactt
ttttgctaaaaacgaGAAGACATTCATTGAACCAAAAAAACCTCCAACGA
TACACATTCAACCTCAACAGCCGGCGCACGATCATTTAATCCAATATGAA
GGGCGAACTTCAGCCCGTGTCGCACCTTCTGAGAAAACATCCGTTCAATA
TCGACCGGTACCTTTTATCTCGCTGCCAAACGATGAACAGCCCGACATCA
TGCACGAAGATGTGCAACCTTCACCACCACGACGCTTCCTACCACAACCT
CCTTCACGACCGAGCACAGGCGCCAGTAATTCAAACATCGAAGATGGTGG
CAACAAACCATGGCATATTTATCGAAGAGACCAAAAACGAATACACATCA
TTCGATTGAAAACAGAGGCTGCCATCAAAATACAATCCGTTTTTCGTGGT
TACCGTGCAAGGCGTGTTGTCCGTTTCTTGAATAGAAATGATAAGCAATA
CCTCGACGTGAATAGATCGGAACTGTCAGACTTTTCGACTTTGGGTTCAG
AATCAGACAGCTATCTTAGTATGGATTCTGAAATTCCAGACGATGATACT
TTACGCGAAATTGCTGCTTTAGTAATACAAGTAGCATGGAGACAGTATGT
caaattgaaacttttgaaCAGAGCAAGTTCAGAAGAACATATTATACCTG
AAAGCAATACTACTAATGAGCAACTGAACTCTTCATCTGTTGACtttaaa
aaacgaaaactttCTCAAAGTGATCTAGGAAGTTCTATTACTTCATCGAA
TGGAAGTGAGGTTCACTCGAAGGACGTCATGAGTAGAACGAAAAGTAAaa
caatcgaatctcaatctaTAGACTTGATTTCGCAAGATGTTATTGGTGCG
GAAGTGAGTTCTAAACGGAAGAGTAGTAAGCGGAGAAATAAAGCCAAACT
GGCTCCTTCATCTTCCTTCCCTTTGATGGAAAATATTTACCGTGAAAACG
TGCGAGTAAAACGCACAAAGAAACTATCCATTAAGAGCCGTTTGTTACAA
AGACAGTCCACAGTAACCGAGACTGACTTCAAAACGAGGCCGCTCTCTCT
CAGAGACGGTATTGAACAGTTCAGTAAGGAAGATATCGAAGCATTGAAAA
ACGGAAaaccaaaattatttttaaactcGAAAGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060136-exon-scaffold_334-1491911889:227490..231495 | TCONS_00060136-exon-scaffold_334-1491911889:227490..231495 | Clytia hemisphaerica | exon |
| TCONS_00060136-exon-scaffold_334-1510915933:227490..231495 | TCONS_00060136-exon-scaffold_334-1510915933:227490..231495 | Clytia hemisphaerica | exon |
| TCONS_00060136-exon-scaffold_334-1575043694:227490..231495 | TCONS_00060136-exon-scaffold_334-1575043694:227490..231495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_334 | supercontig | scaffold_334:227490..231495 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00060136 vs. Swiss-Prot (Human)
Match: INVS (Inversin OS=Homo sapiens GN=INVS PE=1 SV=2) HSP 1 Score: 412.149 bits (1058), Expect = 3.817e-123 Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = -3
Query: 1914 FGNQSQSSPLHVHAFNGNKKLLQDALQSKEYGVDDIDSTGRTPLIYSVLVEQIDCFNLLLKHGADIDKPDTDGRTCLHWAAYQGNHKLVKLVLSKCKNRTSRDKEGQTPLHLAISHDNLRVMQIILKHLNEHEVDATDNRGMTALCWSVHYERIEHVELLLRYGSDVHVLDNERRGILHWTSQNKDPVL---IKRLLEKGCKG--LGFPDQKGRTVLHMAVGQGNQAIIEYLLTISDIPVNQTDEIQRTPLHWAAVLGHTAIVELLLNSGADYSL-ADNNGVRPLHYAVQNNHRDVVATMIRTGRVTDEPDKDQRTALMWAALKGHMNVLKVLLEGK-NVNINAVDINKQTALHMSCQTGNLECVQLLIQHKADVNMMDQQQHTPLFYACASGHGQIVTKLLQQDDQRNLHQCDLEGRTPLHYSAMVDRREIVNNLLQHGLDPNAQDNSGCPPLHIAAYGGNVHCMNVLLENNAQVNMQDNSGSTALHLACRSGNLDAVKLLVSRYRANMNIFDGSEEKLTCLDYAILNDHQDVSFFLTENGANTISTLHDL-SLKIQTNWRGYSARKRYAELK 3611
F S +S +H A NG+K LQ + D D GRTPL+Y VL +++DC + LLK GAD++K D RT LH AA +GN++ +KL+L++ N +D E TPLHL H + + + ++LK + EVD D TAL WS +Y EHV+LL+++ S++ + D E + LHW + +KDP ++ +L+ L + D +GRT LH AV GN +++ L + + D + RTPLHWAA+LGH IV LLL ++ +D+ G PLHYA Q+N + V ++ V D+ D + RT+ MWAA KG +VL+ +L K +++IN D TALH + +G++ V+LL+++ A V+ D +HTPLF AC GH ++ L++ + +L D +G + LH++A+ ++ L+++ ++PN QD +G PL AAYGG ++CM VL+ENNA N+QD G TALH +C +G LDA+KLL+ + A N + +EE+ T LDYA+L + +V F+ E+GA +I+ + D+ + KIQ ++GY RK + + K
Sbjct: 9 FAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADRLDCADALLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHRSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTALHAAALSGHVSTVKLLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDL--VDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLD-FAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRK 579
The following BLAST results are available for this feature:
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