TCONS_00061925-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061925-protein
Unique Name	TCONS_00061925-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	335

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061925-protein ID=TCONS_00061925-protein|Name=TCONS_00061925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MSELNSLKNDGQNLSQLFKKGWKDFLEIEDSSEPSNSDSYQKKTKLCIET
FIKCTHMVNILGLFSSNEHIDEISTETISFLLLPAFLGELSLKLISDERK
SSVKNALVYFRSFLKHCQDYQITNKKLSHYIEDESEEEKKPDTDTIRNKI
REEKISRFKENKLLENSIKTIQDRLEKDEISVDESATREHYMNWIKLWIN
RAVENVDSIKSEMDILEHMEKLRMGKVKPQPPKEVKPLKPILITREMLQN
KVFGAGYRNLPTMSQEEYFEKELREGKIVQDYNSKSKGGASGSTAEEEKD
EDRDEHDEEKLKKAREWDEWKDTHRRGEGNKERHG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038827	XLOC_038827	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061925	TCONS_00061925	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023109	Integrase_recombinase_N
IPR007304	TAP42-like

Vocabulary: **Biological Process**
Term	Definition
GO:0009966	regulation of signal transduction

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009966	regulation of signal transduction

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..335
IPR023109	Integrase/recombinase, N-terminal	GENE3D	1.10.150.130		coord: 12..151 e-value: 0.0071 score: 16.1
IPR007304	TAP42-like protein	PFAM	PF04177	TAP42	coord: 14..325 e-value: 2.3E-87 score: 293.0

Blast

[Close]

BLAST of TCONS_00061925-protein vs. Swiss-Prot (Human)
Match: IGBP1 (Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.782e-47
Identity = 105/336 (31.25%), Postives = 185/336 (55.06%), Query Frame = 0

Query:   14 LSQLFKKGWKDFLEIEDSSEPSNSDSYQKKTKLCIETFIKCTHMVNILGLFSSNEHIDEISTETISFLLLPAFLGELSLKLIS-DERKSSVKNALVYFRSFLKHCQDYQITNKKLSHYIEDESEEEKKPDTDTIRNKI-----REEKISRFKENKLLENSIKTIQDRLEKDEISVDESATREHYMNWIKLWINRAVENVDSIKSEMDILEHMEKLRMGKVKPQPPKEVKPLKPILITREMLQNKVFGAGYRNLPTMSQEEYFEKELREGKIVQDYNSKSKGGASGSTAE--------EEKDEDRDEHDEEKLKKAREWDEWKDTHRRGEGNKERHG 335
            L +LF+ G +   E+E ++EP+ S   Q+K    ++   K   M++ L LFS NE ++EI++  + +LL+PAF G L++K ++  +R   ++ A  +F ++L  C  Y +   +L   + + +E      +    + +     R+ KI R+K+ K LE+ +  ++  +E  +   D+   RE+Y+  ++ WI+ ++E ++SI  E+ IL   +  R         +E  P+KP ++TR M Q KVFGAGY +LPTM+  +++E+  + G +        +G A  +  E        EE++E  +E DE+ L +AREWD+WKDTH RG GN++  G
Sbjct:   12 LPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQ--ADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGAL------PDQGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQTLHRAREWDDWKDTHPRGYGNRQNMG 339

The following BLAST results are available for this feature:

BLAST of TCONS_00061925-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061925-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IGBP1	1.782e-47	31.25	Immunoglobulin-binding protein 1 OS=Homo sapiens G...	[more]

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TCONS_00061925-protein (polypeptide) - C. hemisphaerica