TCONS_00062910-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062910-protein
Unique NameTCONS_00062910-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062910-protein ID=TCONS_00062910-protein|Name=TCONS_00062910-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
SNVKVRMKKVFFDSTKQRAFILWPQKMSVKKYVIRKTREILYTDVFQLKR
RLLIMSFVLRYFMMGVEYSIILPTALLYMKTFNAGPFMTGLTIAAYPVAA
CISLPICGYFYDSTKRVKELLLILNGFEILGNLIYALPFSMLLPLLGRFI
AGIGDGFLALTVGELTYLYEEKHRLGVITLLEFGRVLGLIVGPSFNFLIE
GKRVQFDTWVLDNNTLPGVIMAIAWLVMEVITIFCVFNLAKQLIDVKMEN
KDEFDEIEDSVSLLPREKAEQEVPFDGSSDSLFDSPGDTEMSPENPFDDM
ESELTKAAQTLLW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039400XLOC_039400Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062910TCONS_00062910Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 33..306
e-value: 5.1E-18
score: 64.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..313
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 61..195
e-value: 5.6E-10
score: 38.6
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 53..313
score: 10.91
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 61..237
e-value: 5.11557E-13
score: 66.5685
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 50..239

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062910-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top