TCONS_00065193-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065193-protein
Unique NameTCONS_00065193-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065193-protein ID=TCONS_00065193-protein|Name=TCONS_00065193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MMKLASVLVFLAVASSIEAGYVNRVVIRSYRSTYLLVRSPPLNMHQAKHA
CARFGGFLATINNQREHHFLVAKLQHYNIRSAWVGLNDKANEKVFRWDGS
NVAGFKKWCPHEPNNFRYGEDCVELLGPVNYKCLNDLPCTRVLPYICEVA
RRSY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040870XLOC_040870Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065193TCONS_00065193Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 20..148
e-value: 1.2E-16
score: 71.3
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 42..148
e-value: 9.1E-18
score: 64.9
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 34..148
score: 18.522
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 22..154
e-value: 9.4E-30
score: 103.1
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 122..147
NoneNo IPR availableCDDcd00037CLECTcoord: 32..149
e-value: 1.0026E-28
score: 102.698
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 30..148

Blast
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BLAST of TCONS_00065193-protein vs. Swiss-Prot (Human)
Match: MRC2 (C-type mannose receptor 2 OS=Homo sapiens GN=MRC2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.845e-18
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0 
Query:   45 HQAKHACARFGGFLATINNQREHHFLVAKLQHYNIRSAWVGLNDKANEKVFRWDGSNVAGFKKWCPHEPNNFRYG-EDCVELLGPVNYKCLNDLPCTRVLPYICEVA 150
             ++K AC R GG L +I++  E  F+  +++   +   W+GLND   +  F W   ++  F  W P EPNNFR   EDCV + GP      ND PC + LP IC+ A
Sbjct:  404 QESKKACLRGGGDLVSIHSMAELEFITKQIKQ-EVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDSLEDCVTIWGPEGR--WNDSPCNQSLPSICKKA 507
The following BLAST results are available for this feature:
BLAST of TCONS_00065193-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRC22.845e-1838.32C-type mannose receptor 2 OS=Homo sapiens GN=MRC2 ... [more]
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