TCONS_00065586-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065586-protein
Unique NameTCONS_00065586-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length213

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065586-protein ID=TCONS_00065586-protein|Name=TCONS_00065586-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
MVDLTPIQTLGLVCLLTFSFFVIVVLFLECIGRFHCMMRITDQSQTRNKT
MTDQSEKQNKLDIESNLVHNFDRYSNTARKGPKCIRTIGISSGIGVQCFD
TVNCYCCWREDELDSSLVIALPYSCKIDYNFVRTKEETCAICLDELTRKQ
PIKLDCNHHFHNSCIMKWLRQSDQCPLCKQTVNIEVVADPLSVDSCESIV
FHELAILDTVSHV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041095XLOC_041095Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065586TCONS_00065586Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 139..178
e-value: 1.2E-8
score: 44.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 138..179
e-value: 3.1E-14
score: 52.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 139..179
score: 12.991
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 138..182
e-value: 4.95911E-7
score: 43.5884
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 138..179
e-value: 0.0043
score: 10.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 128..195
e-value: 5.6E-18
score: 63.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 138..185

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065586-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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