TCONS_00065587-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065587-protein
Unique NameTCONS_00065587-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065587-protein ID=TCONS_00065587-protein|Name=TCONS_00065587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MLALWITIGVTGTYITASILFGRFPTLLHKKKKQKFRCQHISHRGGAGEN
LENTITAYKDAIKNGTNMIELDVQLTADGVVVVSHDNELGRITGAEGLIS
ETNFEDLPCLQPVQDITFDIGAKMTSDSKDNKIPTLRKVFEEFPNIPMNI
DIKRNDDELIDKTLALIKEFQREEIVAAGNFSETITGKIHQRAPKIPLIF
SMKKVMITLVLFYTGLLPFIPLKEDFFEIPLPRVILRHPDTFVNIRTLLK
IADWLLVSPVLFRHLQRRGIQVYMFVIQEDEDFDFCLNKAKVDGVMTDYP
KRLSNFLKESKGSTGDETDPILKKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041096XLOC_041096Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065587TCONS_00065587Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
IPR030395GP_PDE_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0008081 phosphoric diester hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainGENE3D3.20.20.190coord: 24..314
e-value: 2.3E-57
score: 194.1
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domainSUPERFAMILY51695PLC-like phosphodiesterasescoord: 38..307
IPR030395Glycerophosphodiester phosphodiesterase domainPFAMPF03009GDPDcoord: 43..301
e-value: 8.9E-29
score: 100.9
IPR030395Glycerophosphodiester phosphodiesterase domainPROSITEPS51704GP_PDEcoord: 38..307
score: 37.618
NoneNo IPR availableCDDcd08612GDPD_GDE4coord: 12..309
e-value: 2.11669E-145
score: 413.92

Blast
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BLAST of TCONS_00065587-protein vs. Swiss-Prot (Human)
Match: GDPD1 (Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Homo sapiens GN=GDPD1 PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 3.292e-91
Identity = 137/308 (44.48%), Postives = 202/308 (65.58%), Query Frame = 0 
Query:    3 ALWITIGVTGTYITASILFGRFPTLLHKKKKQKFRCQHISHRGGAGENLENTITAYKDAIKNGTNMIELDVQLTADGVVVVSHDNELGRITGAEGLISETNFEDLPCLQPVQDITFDIGAKMTSDSKDNKIPTLRKVFEEFPNIPMNIDIKRNDDELIDKTLALIKEFQREEIVAAGNFSETITGKIHQRAPKIPLIFSMKKVMITLVLFYTGLLPFIPLKEDFFEIPLPRVILRHPDTFVNIRT---LLKIADWLLVSPVLFRHLQRRGIQVYMFVIQEDEDFDFCLNKAKVDGVMTDYPKRLSNFL 307
            A +  +   G Y+  S L  ++PTLLH++KKQ+F  +HISHRGGAGENLENT+ A++ A+K GT+M+ELD  +T D  VVVSHD  L R TG    IS+  + +LP      D++F    +   + KDN+IP L++VFE FPN P+NIDIK N++ LI K   L+K + RE +   GN +  I  K ++    IP++FS+++V++ L LF+TGLLPF+P++E FFEIP+P +IL+  +     R+   L+ ++D LL+   LF HL  RGIQVY++V+ E++++    +     GVMTDYP +L +FL
Sbjct:    5 AAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVKIGTDMLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPYLGKLDVSFQRACQ--CEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKRYNREHLTVWGNANYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDLLLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGAT-GVMTDYPTKLRDFL 309
The following BLAST results are available for this feature:
BLAST of TCONS_00065587-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDPD13.292e-9144.48Glycerophosphodiester phosphodiesterase domain-con... [more]
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