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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065693-protein ID=TCONS_00065693-protein|Name=TCONS_00065693-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MSRTRISSKMEHNNKLNSLSMLPGSILNACSFNNDTDATFQLLFNNKSLE
NEKQSCNGYGVNNISETNNSLLKTLDFIDSNINEYPSVKSETYTLDDLLD
LENEELAQVPYYYDNASFDDESLFVPSTEILMDTALASPLSSSSDESCDL
NDLLFMCDQAAETRTQEQPASVQEVTDHQYALLEDAPKADQEISLEDMLA
GNTTDLSALCSLLFQAKGIEAPEFSALEEQPTTVLEEPTVSAPLSPASSV
TSSESESESRPARYKPYRKQKTPEQKLRKKAQNRTAATRYRVKKKDELKI
MTDEADKLEETNKDLKGKVDGLRNEIDYLKNLMLDVIKARLAKGATPDAL
LSAAALMLK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 291..332 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 261..338
e-value: 1.5E-12
score: 46.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 230..286 |
| None | No IPR available | CDD | cd14692 | bZIP_ATF4 | coord: 274..336
e-value: 5.95352E-20
score: 81.0834 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 282..335 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 271..335
e-value: 3.4E-14
score: 63.1 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF00170 | bZIP_1 | coord: 275..331
e-value: 9.4E-13
score: 48.0 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS00036 | BZIP_BASIC | coord: 278..293 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 273..336
score: 10.599 |
Blast
The following BLAST results are available for this feature:
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