TCONS_00065816-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065816-protein
Unique NameTCONS_00065816-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065816-protein ID=TCONS_00065816-protein|Name=TCONS_00065816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MHYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI
DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTW
LEDARQHSSSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSA
KTAANVEEAFIGTAKEIYQKIQEGILDLNNESNGIKIGPQHSAASPSPMG
GGAGGQQGGGCC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041231XLOC_041231Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065816TCONS_00065816Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 30..46
score: 32.76
coord: 7..28
score: 51.86
coord: 110..123
score: 50.42
coord: 48..70
score: 55.36
coord: 145..167
score: 47.18
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 12..207
e-value: 1.6E-5
score: 29.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..170
e-value: 1.9E-109
score: 379.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..170
e-value: 9.2E-38
score: 141.4
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 9..170
e-value: 2.9E-11
score: 24.8
NoneNo IPR availableGENE3D3.40.50.300coord: 71..168
e-value: 1.8E-39
score: 133.3
NoneNo IPR availableGENE3D3.30.70.1390coord: 6..70
e-value: 1.2E-27
score: 95.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..212
NoneNo IPR availablePROSITEPS51419RABcoord: 2..212
score: 36.655
NoneNo IPR availableCDDcd01866Rab2coord: 3..170
e-value: 6.91675E-130
score: 364.822
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 7..160
e-value: 3.2E-33
score: 112.8
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 8..168
e-value: 1.5E-62
score: 209.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..180

Blast
[Close]
BLAST of TCONS_00065816-protein vs. Swiss-Prot (Human)
Match: RAB2A (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 3.679e-139
Identity = 190/212 (89.62%), Postives = 200/212 (94.34%), Query Frame = 0 
Query:    1 MHYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGILDLNNESNGIKIGPQHSAASPSPMGGGAGGQQGGGCC 212
            M YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHS+SNMVIMLIGNKSDLE+RREVKKEEGEAFAREHGLIFMETSAKTA+NVEEAFI TAKEIY+KIQEG+ D+NNE+NGIKIGPQH+A + +  G   G Q GGGCC
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC 212
The following BLAST results are available for this feature:
BLAST of TCONS_00065816-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB2A3.679e-13989.62Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2... [more]
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