TCONS_00065834-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065834-protein
Unique NameTCONS_00065834-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065834-protein ID=TCONS_00065834-protein|Name=TCONS_00065834-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MTTTENHNKADGVKFSEIIPLMQQVHRSNGMFVPNVGIPAAMKQKEEVVV
ERMMEHCGFKTGMACVLGYALGGAFGLFTAGLDSSMPTNVTGQHEQTAKE
IVKDMKSRAGSYARNFAVVGAMFSATECLIESYRGKTTLSNGTISGCITG
GMLGFRAGPQAAAFGCAGFAAFSTAIDYYFRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041242XLOC_041242Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065834TCONS_00065834Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 57..173
e-value: 9.7E-29
score: 99.7

Blast
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BLAST of TCONS_00065834-protein vs. Swiss-Prot (Human)
Match: TIM22 (Mitochondrial import inner membrane translocase subunit Tim22 OS=Homo sapiens GN=TIMM22 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.410e-57
Identity = 86/146 (58.90%), Postives = 108/146 (73.97%), Query Frame = 0 
Query:   37 GIPAAMKQKEEVVVERMMEHCGFKTGMACVLGYALGGAFGLFTAGLDSSMPTNVTGQHE-QTAKEIVKDMKSRAGSYARNFAVVGAMFSATECLIESYRGKTTLSNGTISGCITGGMLGFRAGPQAAAFGCAGFAAFSTAIDYYFR 181
            GIP+  K +E+ ++E+ ME C FK  +ACV G+ LGGAFG+FTAG+D+++  +    +   TAKE++KDM  R  SYA+NFA+VGAMFS TECLIESYRG +   N  ISGCITGG +GFRAG +A A GC GFAAFS AIDYY R
Sbjct:   49 GIPSPAKSEEQKMIEKAMESCAFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAGAIGCGGFAAFSAAIDYYLR 194
The following BLAST results are available for this feature:
BLAST of TCONS_00065834-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIM221.410e-5758.90Mitochondrial import inner membrane translocase su... [more]
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