TCONS_00065999-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065999-protein
Unique Name	TCONS_00065999-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	975

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065999-protein ID=TCONS_00065999-protein|Name=TCONS_00065999-protein|organism=Clytia hemisphaerica|type=polypeptide|length=975bp
MKTEHVCQFLTQFVTSVEETKKVDNDETTTTQENLKESIGDIEELLLAVS
NQMVQERENDLVTSLFATLESCLLVPGSEFVKQLCLNVLTNLTQQDKLKL
NFHCFKMEFLLDCLRSTEDPQTQENCLQLISATAVLFPTHILHSVMHVFS
FMGGTLLKIDNEHTFNVIKKTIHTILPPILQVKEKSSRKRLSDSSIQEVV
LDAIQAFVASCPHCPEHRREFILQELLKAIGIEDNLGNTMLLLIKLISSD
SDGGSGGSAEGVGGDVDMKEVEGKNMYSRMTLDFCIHFFSLYDIPTQLST
VNKMIRYLSTLSIQKANTRKKGRLGAVDALFDTHNEGEKKSRLFIYTVIS
FIDHVLKSLSADQQLHVIVASQNFTRTFLALTEAFIHYADLLENSIKDFE
NNTMSRAFVKKLLAKTCHVMEMSFKLLPFITYMELLAGLMQKTQILLKTK
AFELLAKVLKETEKLTEKEEEALIALTPIIHNDVTSLQKKRKVDPNMLQL
QLFAMKLIVIRVSGNHPELFVSWLPITSALCAGANTNDMVSINAMLLCKE
LVGLLKLEVLPYLGDIVQPMLQKLSHSIENISSSKDTLLMVTCIMSLQKI
FISVPKFMSPYINPIFTKISHIETLKKTLSKDTSTLDGVVEKFKTNLGEK
VAPRILFPIVKEMVSMATNDSSNTNTLVTCLDIYRISLDQMTSSEINDVF
KTDIVSLFQVLLQQSSNYEGEMSENMLETETIKTFCKLALRMTEKSLRHI
YTQLFNWATKDNELVSRKMLVFYRLSVSMATTLQGLFLLFVHELLEKSAD
VLSFLSKVTAPKDMTLSRELLICVMDCFTSIFTYDTHGFMNRERFQMVAK
PIVQQIETSLFEEDISSYKTFYGEHYQQCVVKLASAVNDPVCWKTLNIEL
LNRTKSDDVQVRLAVLNVIDKIYDSLGESYMVLIPETIPYLSEVLEDESA
EVEEKCRFVIKKIEQITGESIQKYF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041328	XLOC_041328	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065999	TCONS_00065999	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012954	BP28_C_dom
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012954	BP28, C-terminal domain	SMART	SM01036	BP28CT_2	coord: 697..839 e-value: 3.3E-5 score: 31.1
IPR012954	BP28, C-terminal domain	PFAM	PF08146	BP28CT	coord: 712..839 e-value: 6.7E-18 score: 64.9
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 627..975 e-value: 5.3E-9 score: 34.9 coord: 3..622 e-value: 6.6E-12 score: 44.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 54..146 coord: 427..465 coord: 516..759 coord: 813..974 coord: 174..216

Blast

[Close]

BLAST of TCONS_00065999-protein vs. Swiss-Prot (Human)
Match: HEAT1 (HEAT repeat-containing protein 1 OS=Homo sapiens GN=HEATR1 PE=1 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 5.748e-85
Identity = 248/961 (25.81%), Postives = 470/961 (48.91%), Query Frame = 0

Query:   61 LVTSLFATLESCL-LVP----GSEFVKQLCLNVLTNLTQQ--------DKLKLNFHCFKMEFLLDCLRSTEDPQTQENCLQLISATAVLFPTHILHSVMHVFSFMGGTLLKIDNEHTFNVIKKTIHTILPPILQVKEKSSRKRLSDSSIQEVVLDAIQAFVASCPHCPEHRREFILQELLKAIGIEDNLGNTMLLLI-KLISSDSDGGSGGSAEGVGGDVDMKEVEGKNMYSRMTLDFCIHFFSLYDIPTQLSTVNKMIRYLSTLSIQKANTRKKG-------RLGAVDALFDTHNEGEKKSRLFIYTVISFIDHVLKSLSADQQLHVIVASQN---FTRTFLALTEAFIHYADLLENSIKDFENNTMSRAFVKKLLAKTCHVMEMSFKLLPFITYMELLAGLMQKTQILLKTKAFELLAKVLKETEKLTEKEEEALIALTPIIHNDVTSLQKKRKVDPN-----MLQLQLFAMKLIVIRVSGNHPELFVSWLPITSALCAGANTNDMVSINAMLLC-KELVGLLKLEVLPYLGDIVQPMLQKLSHSIENISSSKDTLLMVTCIMSLQKIFISVPKFMSPYINPIFTKISHIETLKKTLSKDTSTLDGVVEKFKTNLGEKVAPRILFPIVKEMVSMATNDSSNTNTLVTCLDIYRISLDQMTSSEINDVFKTDIVSLFQVLLQQSSNYEGEMSENMLE----TETIKTFCKLAL--RMTEKSLRHIYTQLFNWATKDNELVSRKMLVFYRLSVSMATTLQGLFLLFVHELLEKSADVL----------SFLSKVTAPKDMTLSRELLICVMDCFTSIFTYDTHGFMNRERFQMVAKPIVQQIETSLFEEDISSYKTFYGEHYQQCVVKLASAVNDPVCWKTLNIELLNRTKSDDVQVRLAVLNVIDKIYDSLGESYMVLIPETIPYLSEVLEDESAEVEEKCRFVIKKIEQITGESIQKYF 975
            LV +LF  L  CL  +P      E+ KQL L+ L N+ Q+         K  L+   F +E ++ C+R +E PQT  + L L+   A +FP  +LH++M +F+FMG  ++++D+ ++F VI KT+  ++P ++Q     S +     +++E+V+  I  FV + PH PEHRR  IL +L+  +G E  L   ++LL  + ++      + G  + +       E + +  +S      C  F     +  Q+ ++  +++YL  L  +K  T  K            +  +F+      K+ R F +  +SF+  +L   S++  L  +V S            L E  + Y   +  S++    + ++  F + LL+K   +++    LLP  T++ ++ GL+      ++ KA +LL   L++     +      + L P    D+ ++ +++K +         Q  L+ +KL+       +P+ FV  L     L A     +   + + LLC  E+   L+   +P L  ++  +L  + ++ E +SS    + +++ + +LQK+  ++P F+SPY+  I +++ H+E +   +    S  +  +   K  L   +APR+L P +K+       + +  N +   + I +  +  M   E+    ++ + + F     ++ ++  + SEN LE    TE     C +A+  +++E + R ++ +LF+WA K  +    ++L FY L+  +A  L+GLF LF   L++  AD L          +F      P+   L   LL  +++C   IF +DT  F+++ER + +  P+V Q+E  L  E+   ++    +H   C+ + + A+ D   WK LN ++L +T+    +VR A L  +  + + L E+Y+VL+PE+IP+L+E++EDE  EVE +C+  I+++E + GE +Q YF
Sbjct: 1226 LVPTLFNLLSRCLEPLPQEQGNMEYTKQLILSCLLNICQKLSPDGGKIPKDILDEEKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVLHNIMSIFTFMGANVMRLDDTYSFQVINKTVKMVIPALIQSDSGDSIE--VSRNVEEIVVKIISVFVDALPHVPEHRRLPILVQLVDTLGAEKFLWILLILLFEQYVTKTVLAAAYGEKDAI------LEADTEFWFS-----VCCEF----SVQHQIQSLMNILQYLLKLPEEKEETIPKAVSFNKSESQEEMLQVFNVETHTSKQLRHFKFLSVSFMSQLL---SSNNFLKKVVESGGPEILKGLEERLLETVLGYISAVAQSMER-NADKLTVKFWRALLSKAYDLLDKVNALLPTETFIPVIRGLVGNPLPSVRRKALDLLNNKLQQNISWKKTIVTRFLKLVP----DLLAIVQRKKKEGEEEQAINRQTALYTLKLLCKNFGAENPDPFVPVLNTAVKLIAPERKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPSLLTTMKNTSELVSSE---VYLLSALAALQKVVETLPHFISPYLEGILSQVIHLEKITSEMG-SASQANIRLTSLKKTLATTLAPRVLLPAIKKTYKQI--EKNWKNHMGPFMSILQEHIGVMKKEELTS-HQSQLTAFFL----EALDFRAQHSENDLEEVGKTENCIIDCLVAMVVKLSEVTFRPLFFKLFDWA-KTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDSENDPEKCCL---LLQFILNCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGEE--KFQERVTKHLIPCIAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYIVLLPESIPFLAELMEDECEEVEHQCQKTIQQLETVLGEPLQSYF 2144

The following BLAST results are available for this feature:

BLAST of TCONS_00065999-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065999-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HEAT1	5.748e-85	25.81	HEAT repeat-containing protein 1 OS=Homo sapiens G...	[more]

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TCONS_00065999-protein (polypeptide) - C. hemisphaerica