TCONS_00067831-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067831-protein
Unique Name	TCONS_00067831-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	916

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067831-protein ID=TCONS_00067831-protein|Name=TCONS_00067831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=916bp
RHYFQYYTNALIRYLYSNFLRNHQEVTMVKHLLPLLVLLFLEVMLCNGGD
VFGNEIDQSLKKKIIRGQGGFEVIGVFPFNEINKRSEVDLQNGVMLAEAM
RFTIQQVNKLDILHGYKFNLTSMFNCQTEFCVREKIRDTFLTKTQFLIGP
YSSETSYYGSILTDTFQLPSISYSATYSDFGRYGLMQRYMYRTVPSDDYR
ILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKI
PNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESR
FTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPEN
HPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTP
IHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGA
QRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYDISRYSY
DQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGV
CSMPCGIGQYMEHDQNYVRAKCCWTCRKCPTDHIVVNNTCIECKNTEFPD
EQHTRCLSLPIKAITWGSNVISIIFVLFSVVGLFLTICVALIFSKNNDNR
IVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTC
YAPLFLKTNRIYRIFFSARVSVSRPSLVSSQSQFAALFGVLAVQIILSIV
WFTSQIPIPESQVSKSGNYVTIHCSSDSNPVLMILNLSLSVLFMICCTVL
AFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYL
MCIVCILIGFVTLFGMFGPKIIMIYHAPPQGSSQGSLPTWYITNSRDETE
HDRENTAFTTITPERS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042360	XLOC_042360	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067831	TCONS_00067831	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C
IPR011500	GPCR_3_9-Cys_dom
IPR001828	ANF_lig-bd_rcpt
IPR028082	Peripla_BP_I

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 694..715 score: 46.02 coord: 200..216 score: 29.23 coord: 68..80 score: 29.57 coord: 812..833 score: 54.97 coord: 649..671 score: 38.59 coord: 733..756 score: 23.31 coord: 789..812 score: 43.75 coord: 216..233 score: 30.21
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 634..872 e-value: 4.8E-47 score: 160.6
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 621..880 score: 43.407
IPR011500	GPCR, family 3, nine cysteines domain	PFAM	PF07562	NCD3G	coord: 550..599 e-value: 2.0E-8 score: 34.0
None	No IPR available	GENE3D	3.40.50.2300		coord: 77..541 e-value: 6.7E-29 score: 100.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 897..916
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 97..432 e-value: 2.8E-31 score: 108.8
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 92..425

Blast

[Close]

BLAST of TCONS_00067831-protein vs. Swiss-Prot (Human)
Match: GRM3 (Metabotropic glutamate receptor 3 OS=Homo sapiens GN=GRM3 PE=1 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 1.262e-98
Identity = 251/897 (27.98%), Postives = 410/897 (45.71%), Query Frame = 0

Query:   28 MVKHLLPLLVLLFLEVMLCNGGDVFGNEIDQSLKKKIIRGQGGFEVIGVFPFNEINKRSE----VDLQNGVMLAEAMRFTIQQVNKLD-ILHGYKFNLTSMFNCQTEFCVREK-------------------------IRDTFLTKTQFLIGPYSSETSYYGSILTDTFQLPSISY---SATYSDFGRYGLMQRYMYRTVPSDDYRILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKIPNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESRFTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPENHPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTPIHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGAQRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYD-----ISRY---SYDQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGVCSMPCGIGQYMEHDQNYVRAKCCWTCRKC-PTDHIVVNNTCIECKNTEFPDEQHTRCLSLPIKAITWGSNVISIIFVLFSVVGLFLTICVALIFSKNNDNRIVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTCYAPLFLKTNRIYRIFFSARVSVSRPSLVSSQSQFAALFGVLAVQIILSIVWFTSQIP-IPESQVSKSGNYVTIHCS-SDSNPVLMILNLSLSVLFMICCTVLAFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYLMCIVCILIGFVTLFGMFGPKIIMIYHAPPQ 880
            M+  L  L + LF +  L + GD        +  ++ I+ +G   + G+FP NE    +E    ++   G+   EAM F I ++NK D +L G K  +  +  C  +    E+                         I++        +IG   S  S   + L   FQ+P ISY   SA  SD  RY     Y  RTVP D Y+  A  + +R  NWTYV  ++S G  GE     F ++      C+++  K+    +  K Y+++I E+L +    V+VLF  + D+R +  +  A +  + FT +   G      ++ G++ +A G +++ + +  V +F  +F  L P N+   + +F  FWE  F C +    N   + + C  +  +D    Y   + I  V++AVY MA A        C                    ++C   A +I    K  +D LLK+ +       + P NPN  +  S +++D     + RY   ++    G+ +   V  W      +  S    +  +  S+             CS PC   +        V   CCW C  C P +++    TC++C + ++P    T C  LP   I W  +  +I  V  + +G   T  V  +F K+N+  +V+ASGR+LCY ++FG+ + +   F F+ + +   C +R    G +F  CY+ L  KTN I RIF   +    RP  +S  SQ     G++ VQI++  VW   + P      +++    V + C+  DS+   M+++L+  V+ +I CTV AFKTR+ P+N+NEAK+IG T+Y TC++W  FLPIF++T S DY  ++   MCI   L GFV L  +F PK+ +I   P +
Sbjct:    3 MLTRLQVLTLALFSKGFLLSLGD-------HNFLRREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYD----YFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIATAEKV-GRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSREL--IAAASRANASFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNN-HRNPWFRDFWEQKFQCSLQNKRN---HRRVCDKHLAID-SSNYEQESKIMFVVNAVYAMAHALHKMQRTLCP----------------NTTKLC--DAMKILDGKKLYKDYLLKINF-------TAPFNPNKDA-DSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSRNSVPTSQ-------------CSDPCAPNEMKNMQPGDV---CCWICIPCEPYEYLADEFTCMDCGSGQWPTADLTGCYDLPEDYIRW-EDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYCMTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSSQVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSS---MLISLTYDVILVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSS-DYR-VQTTTMCISVSLSGFVVLGCLFAPKVHIILFQPQK 832

The following BLAST results are available for this feature:

BLAST of TCONS_00067831-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067831-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM3	1.262e-98	27.98	Metabotropic glutamate receptor 3 OS=Homo sapiens ...	[more]

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TCONS_00067831-protein (polypeptide) - C. hemisphaerica