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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=transcript|length=3181bp
TCCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTat
tcaaattttcttagaaatcatCAGGAAGTCACTATGGTAAAACATTTACT
TCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAG
AtgtttttggaaatgaaattgaCCAAagtctaaagaaaaaaattatccgA
GGCCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAatgaaatcaa
caaaagaagcgaagttgatcttcaaaatGGTGTCATGCTTGCTGAAGCAA
TGAGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCACGGTTAC
AAATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTGTGTCCG
TGAAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGATTGGTC
CATACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGATACTTTC
CAACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGGACGTTA
CGGGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACGATTATC
GTATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACGTACGTT
GGCGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTATTCTGTT
TATAcggaaactttcaaaatatggtGCTTGTTTGTCGAGCCAAAGAAAAA
TTCCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATCGAAGAA
ATGCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAACCAATAA
AGATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAGAATCTA
GATTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGATGTCGTA
AATGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATATCCACAA
TACTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAACCTGAAA
ACCATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAACGTATTT
CACTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAAAAAATG
CACCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGTCTACCC
CTATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCAAccaaa
aatttcattgaaaacacatGTAACGAATTTGAATATCGAAAATTGGAGCT
CAACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATATCGGAG
CTCAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCAAA
TTGGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCTAA
CGACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAGTT
ACGACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGAAA
GTACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAgaaattttt
agcaaaatctgAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGGTG
TTTGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAAAT
TACGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGATCA
CATTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCCCG
ATGAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTTGG
GGATCGAATGTGATTTcgatcatttttgttttgttttcagtggTAGGCTT
ATTCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAACA
GAATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTGGT
ATATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAATAA
AGCTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGACGT
GTTACgctcctttgtttttaaaaacaaaccgtATCTATCGGATCTTTTTC
AGCGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCCCA
GTTCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTATCG
TTTGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAATCC
GGAAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTCAT
GATCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGTGT
TAGCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAATAC
ATTGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTACC
AATCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATACC
TAATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAATG
TTTGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCGAG
CCAAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAACAG
AACATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGATCT
TAATGATATCACATATCACCATAAGATGGGGCTTGGTGTAAAGACAATGA
AACAATGACACTAATCATTATTCCCTTGGCAACATTTTGTGTACGTCCAT
TTAACATTACCATGTGGTCGTTGAGTTGATGTGTTATGCAGGCAGGGATA
GCTCTGAGTATtctgtaaaacattttcaagcgTTACAGTGGCATGTCCAA
AGTAAAAGTGAAGCAGTTCCATTCACTTTCGGATTATCAAACATAACCGT
GAAAGAAGCGCCTTAAAATGTAGATCAACTTGATAGCTGTATGaagttta
tgacgtcataaacatcaCGTAACATTACAtaataaaactcaaaatataTT
AGTTATGAATAAAGTACATAAATTACccgaaaaattagaaaatggcAAGG
CCAAGACCTGTGAAAGAAACTCAAAATTGGT Run BLAST on NCBI protein sequence of TCONS_00067831-protein >TCONS_00067831-protein ID=TCONS_00067831-protein|Name=TCONS_00067831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=916bp
RHYFQYYTNALIRYLYSNFLRNHQEVTMVKHLLPLLVLLFLEVMLCNGGD
VFGNEIDQSLKKKIIRGQGGFEVIGVFPFNEINKRSEVDLQNGVMLAEAM
RFTIQQVNKLDILHGYKFNLTSMFNCQTEFCVREKIRDTFLTKTQFLIGP
YSSETSYYGSILTDTFQLPSISYSATYSDFGRYGLMQRYMYRTVPSDDYR
ILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKI
PNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESR
FTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPEN
HPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTP
IHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGA
QRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYDISRYSY
DQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGV
CSMPCGIGQYMEHDQNYVRAKCCWTCRKCPTDHIVVNNTCIECKNTEFPD
EQHTRCLSLPIKAITWGSNVISIIFVLFSVVGLFLTICVALIFSKNNDNR
IVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTC
YAPLFLKTNRIYRIFFSARVSVSRPSLVSSQSQFAALFGVLAVQIILSIV
WFTSQIPIPESQVSKSGNYVTIHCSSDSNPVLMILNLSLSVLFMICCTVL
AFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYL
MCIVCILIGFVTLFGMFGPKIIMIYHAPPQGSSQGSLPTWYITNSRDETE
HDRENTAFTTITPERS Run BLAST on NCBI transcript from alignment at scaffold_476:156285..162358- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=transcript|length=6074bp|location=Sequence derived from alignment at scaffold_476:156285..162358- (Clytia hemisphaerica)
TCCGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTAT
TCAAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTACT
TCCACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAG
ATGTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCCGA
GGTAAATACTAAAGGCCGGTCTCCACTTGCGCGCGCTGCGATCGCACTTT
TTGGCTTCAATCCTTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTA
GCACGTGCTCTAAAGAAAAGTTGAACACATTTCAACTTTTTTCAACCGCT
ACGTCAGGTCGTGCCAATGGAGTTGCTTAATTTTTCTTTTGACCAATAGC
GTGGAAAGCTTTGCTCGAAAAAGTGCGATCGAAGCGCGTGCAAGTGGAGA
CGGCCTTAAAACCACCATAAACGCGCTTGGGGCCCGAAATCTCTGATCAT
GGATGGGTTGTATTATCGAGGGGATATTTAACCTGGGTAACCTGAAAAGG
TTATATTTCCTGAAAAGGTCTAGATATCCAATGATTGTAATAGCCTCTAG
TCATTCAAATTTTTAATTCAAATTTAATGAAATGTGAAAGATCGCTCATA
TAAAACTTTATTGATAAAATTTCGTTTATAAACAATACACTATATAATAT
GAAAGAATTTTAGATGGGACGTTAAACCTTACCATTTCTATGAACGGAAT
GCTATTGGCTTATAACTTGAATAGTTGTGGGAAATTCCAAAATGAAGTTT
CCAGGAAAAAACTGTATACTTCCGTCCATTTTCCAAGACCATTCCTTTCC
CTGGATTTCTACACTTTCTCTTGGTCGGTCTCTTTAGTTGCTAGGTACCA
AGCAAAGAGGCGTTAAGTACCCATTATGAGTCTTTGGTATAACACTCGCC
GGTTCGGCGTCGAACCCACAACCTTGAGCTGTAAACATGCGTTTTTATAA
GCATTGGACTTATAAGCAAAGCAAAGCTCAGATATATGGCAAATATTTAA
GAATATTCTAAGAATTACCCTGAGACTGCGAAAAATGTATCTTCCTGATT
TTAGTTGTTTTTGGTTGAGGTTTTACGGATTTTCGAAATTTCCTTAAAAT
TTTGTTTAGAATAGAATCATCCATCAAGGAGTTCTCAGTCTTGTCAATTT
CTTGATCTAAGCATTGCTGAGCCAGTTTATGGATTTTTGGATGTTTAATA
TTTAAAAAGAACATGTACTCTATCTTCATGCTCGGGCCCCTCACTCACAA
ACAGATGGCATACTTGCTTACTATTTCTTTCTCCTTTGTCCCCCAAAGAT
TTATATTTTTTTTCTGTTAACAGGCCAAGGTGGTTTTGAGGTCATCGGTG
TTTTCCCATTCAATGAAATCAACAAAAGAAGCGAAGTTGATCTTCAAAAT
GGTGTCATGCTTGCTGAAGCAATGAGATTCACTATCCAACAAGTCAACAA
GCTTGATATACTCCACGGTTACAAATTCAATTTGACCAGTATGTTCAATT
GTCAAACTGAATTTTGTGTCCGTGAAAAAATTCGTGATACTTTCTTAACA
AAAACTCAATTTCTGATTGGTCCATACTCGTCCGAGACTTCTTATTATGG
CTCTATTCTTACTGATACTTTCCAACTGCCGTCGATCAGTTACAGCGCTA
CGTACAGCGATTTCGGACGTTACGGGCTTATGCAACGATACATGTACCGG
ACAGTTCCATCAGACGATTATCGTATTTTGGCCGCTTTACAATTTATCCG
ACAATCCAACTGGACGTACGTTGGCGTCATTAGTTCCCATGGTTACGATG
GAGAACGTGACGCTATTCTGTTTATACGGAAACTTTCAAAATATGGTGCT
TGTTTGTCGAGCCAAAGAAAAATTCCGAATTATGAAGACACTGAAAAACA
TTACGAGAATATTATCGAAGAAATGCTCTCAGAAACCAGGTTAAGTGTTC
TTGTTTTATTTACAACCAATAAAGATACAAGAAACATTTTCCGTGTCTTA
AAAGCGAAAAAATTAGAATCTAGATTCACAATACTGTGTATGTATGGCTG
TACTAACTATTTGGATGTCGTAAATGGAAACCAGGATATAGCAAACGGTA
CCTTGAGTATGTATATCCACAATACTGAAGTTGAAGAATTCAAGTCCTGG
TTTTTACGCTTGAAACCTGAAAACCATCCTTTCGGAGATCTGTACTTTAA
CACATTTTGGGAAAACGTATTTCACTGTCATGTTAATGAATCAGAAAATG
TTAAATTGTATGACAAAAAATGCACCATGAATGAGCAACTGGATGTCGGT
CAAGGATACTACCCGTCTACCCCTATCCATACTGTTCTCGATGCAGTTTA
TGGTATGGCTTTGGCAACCAAAAATTTCATTGAAAACACATGTAACGAAT
TTGAATATCGAAAATTGGAGCTCAACAAGAACGTATCCATTGGAACAGCG
AAACGAATTTGCTATATCGGGTATGTATTGCCATAGTCCATATAAGAAAC
CCTGGTCTGGAAGCCTTTTGTTCCGTTCCATTATTGGACCTACCTGGAGG
TCCTATAAATTAACCTGTGTTCGTCCGTCCGTCCGTCCGTCCGTCTGTTA
CCAACTTTTCTCGGGATTGAATCATAGGAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTGGGCAAATTTAGGCCAAAAAACGGCTAAAAAACGGG
GTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTT
GCATGAAAGTAGGATTCCATCATAGGTAAAAGATGGCCGAAGCAGATTTT
TGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATC
ACTTGTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTCT
TATGAGATAGATGGTTTTTTTTGCTCATGAGGGCTTACTTTTGAAGAATA
TGTGTTTAGACATGAAATTTAGGTTGCTTGGCGTGTTTTCATTAAAAAAC
TGGCCAGATTCGATATTTTTTTATAAGCACATTATCAATTACTTAGGTAT
TAGCTGTTCTCGAGATTGGCTCTTTCATTCTTTATGATTTATTGCACAAA
CATGCATAACTATAAACCCTCAAATGTAACGGAGCTCGATTTTTGGAAAA
ACATTTTTGGGGTAAATTTCAGCTAAAAAACAGCCTAAAAAAGAGTTTTT
CACAAAGTCTTGAATATGAAAGAATATTTCAAGTGCATGAAATTTTGGTT
TCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTGATAGATCGTCA
CTATTTGTGCTCTGAATGATTGTTTAATGGTCACGTCACGTAGATATCAA
TTATAAATGTGTTAAATACATAACAAGGTAGGTCCATAAAAGTATCACTT
GTTTTTTAATTGCACTTGCGTTGAGAAATTAGTTTGTTTTGCTCAATTTT
TGATCGTGTGATTAAATCTTAAACCAATCCCAAGGAGAGTACTTGGTAAC
GTGATCAAAAACTGACCAAACCGATTTTCATCTTTTGATAATAACAAAGG
AAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTT
ATAAGGACATTGCAAAGGTTCAGTTATTCATCAAATAAATAATCTAGGCG
ATCTGTGGTACATATAACCTCTAAAATGTAACTTTTGGAAAGAGGTGGTC
ATTAAGTAACTAGAAGTAGACCAGCTAAAATAAACTCAAATTCATGAGTA
GAAAATGAGGTCCTTTATTGATAATGATACTGATGAGTTTCAGCCCTGGT
CATGGCTTTTGAAAAAGAGACAATAAAAACCCAGCCAAGCCCAGGGCTAA
TCTCCTCATAAATAAAAACAGAGATTAGGATTAAATCACGAAAATGTACA
TAATGTATTATGTGATAATTCAATAGAACTAGAACTAGATTAGACACGGG
GAAGAGTTTGAGTGATACCAGCAAATTTAAGTACCCACTTGAAATCAAGC
CTTATTCATAAAATAATCTTTTTTATTTTTTCTATTCAAAGAGCTCAAAG
AATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCAAATTGGTTT
ACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCTAACGACGGC
AGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAGTTACGACCA
AACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGAAAGTACAAA
GAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAATTTTTAGCAAAA
TCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGGTGTTTGTAG
TATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAAATTACGTTA
GAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGATCACATTGTT
GTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCCCGATGAACA
GCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTTGGGGATCGA
ATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAGGCTTATTCCTA
ACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAACAGAATTGT
CAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTGGTATATGTA
TGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAATAAAGCTTCT
TGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGACGTGTTACGC
TCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTTTTTCAGCGCAC
GTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCCCAGTTCGCA
GCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTATCGTTTGGTT
CACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAATCCGGAAATT
ACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTCATGATCCTG
AACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGTGTTAGCCTT
CAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAATACATTGGTC
TCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTACCAATCTTC
TTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATACCTAATGTG
TATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAATGTTTGGAC
CAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCGAGCCAAGGA
AGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAACAGAACATGA
CCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGATCTTAATGAT
ATCACATATCACCATAAGATGGGGCTTGGTGTAAAGACAATGAAACAATG
ACACTAATCATTATTCCCTTGGCAACATTTTGTGTACGTCCATTTAACAT
TACCATGTGGTCGTTGAGTTGATGTGTTATGCAGGCAGGGATAGCTCTGA
GTATTCTGTAAAACATTTTCAAGCGTTACAGTGGCATGTCCAAAGTAAAA
GTGAAGCAGTTCCATTCACTTTCGGATTATCAAACATAACCGTGAAAGAA
GCGCCTTAAAATGTAGATCAACTTGATAGCTGTATGAAGTTTATGACGTC
ATAAACATCACGTAACATTACATAATAAAACTCAAAATATATTAGTTATG
AATAAAGTACATAAATTACCCGAAAAATTAGAAAATGGCAAGGCCAAGAC
CTGTGAAAGAAACTCAAAATTGGT Coding sequence (CDS) from alignment at scaffold_476:156285..162358- >TCONS_00067831 ID=TCONS_00067831|Name=TCONS_00067831|organism=Clytia hemisphaerica|type=CDS|length=2751bp|location=Sequence derived from alignment at scaffold_476:156285..162358- (Clytia hemisphaerica)
CGTCATTATTTCCAGTACTACACGAACGCTCTCATAAGATATTTGTATTC
AAATTTTCTTAGAAATCATCAGGAAGTCACTATGGTAAAACATTTACTTC
CACTGCTCGTTCTTCTGTTCCTGGAAGTGATGCTATGTAACGGTGGAGAT
GTTTTTGGAAATGAAATTGACCAAAGTCTAAAGAAAAAAATTATCCGAGG
CCAAGGTGGTTTTGAGGTCATCGGTGTTTTCCCATTCAATGAAATCAACA
AAAGAAGCGAAGTTGATCTTCAAAATGGTGTCATGCTTGCTGAAGCAATG
AGATTCACTATCCAACAAGTCAACAAGCTTGATATACTCCACGGTTACAA
ATTCAATTTGACCAGTATGTTCAATTGTCAAACTGAATTTTGTGTCCGTG
AAAAAATTCGTGATACTTTCTTAACAAAAACTCAATTTCTGATTGGTCCA
TACTCGTCCGAGACTTCTTATTATGGCTCTATTCTTACTGATACTTTCCA
ACTGCCGTCGATCAGTTACAGCGCTACGTACAGCGATTTCGGACGTTACG
GGCTTATGCAACGATACATGTACCGGACAGTTCCATCAGACGATTATCGT
ATTTTGGCCGCTTTACAATTTATCCGACAATCCAACTGGACGTACGTTGG
CGTCATTAGTTCCCATGGTTACGATGGAGAACGTGACGCTATTCTGTTTA
TACGGAAACTTTCAAAATATGGTGCTTGTTTGTCGAGCCAAAGAAAAATT
CCGAATTATGAAGACACTGAAAAACATTACGAGAATATTATCGAAGAAAT
GCTCTCAGAAACCAGGTTAAGTGTTCTTGTTTTATTTACAACCAATAAAG
ATACAAGAAACATTTTCCGTGTCTTAAAAGCGAAAAAATTAGAATCTAGA
TTCACAATACTGTGTATGTATGGCTGTACTAACTATTTGGATGTCGTAAA
TGGAAACCAGGATATAGCAAACGGTACCTTGAGTATGTATATCCACAATA
CTGAAGTTGAAGAATTCAAGTCCTGGTTTTTACGCTTGAAACCTGAAAAC
CATCCTTTCGGAGATCTGTACTTTAACACATTTTGGGAAAACGTATTTCA
CTGTCATGTTAATGAATCAGAAAATGTTAAATTGTATGACAAAAAATGCA
CCATGAATGAGCAACTGGATGTCGGTCAAGGATACTACCCGTCTACCCCT
ATCCATACTGTTCTCGATGCAGTTTATGGTATGGCTTTGGCAACCAAAAA
TTTCATTGAAAACACATGTAACGAATTTGAATATCGAAAATTGGAGCTCA
ACAAGAACGTATCCATTGGAACAGCGAAACGAATTTGCTATATCGGAGCT
CAAAGAATCCACAAGAATAGCAAGCACGTCAGAGATGAACTCCTCAAATT
GGTTTACAAAGATGGCACCCTCCGTATCTCTGACCCAGGTAACCCTAACG
ACGGCAGCCGAAAATCAACCATCCAATATGATATCAGTCGCTATAGTTAC
GACCAAACAACAGGGCAGAGTAACATTGAACCAGTTTGGACATGGAAAGT
ACAAAGAGATGAAAATACAACGTCAGCTGAAGTTGAGAAGAAATTTTTAG
CAAAATCTGAATGGTTTATGAGGCGCCATTCTGCTCAAAATTTTGGTGTT
TGTAGTATGCCGTGCGGAATCGGTCAATATATGGAGCATGATCAAAATTA
CGTTAGAGCTAAATGTTGTTGGACTTGCCGTAAATGTCCCACAGATCACA
TTGTTGTCAACAACACTTGTATCGAATGTAAGAATACGGAATTTCCCGAT
GAACAGCATACCCGGTGTTTATCCTTACCGATCAAAGCCATCACTTGGGG
ATCGAATGTGATTTCGATCATTTTTGTTTTGTTTTCAGTGGTAGGCTTAT
TCCTAACCATCTGTGTGGCGCTGATATTCTCGAAAAACAATGATAACAGA
ATTGTCAGAGCATCTGGTCGTGATCTCTGCTACACAATTATGTTTGGTAT
ATGTATGATTTTTGTATGTCCGTTTCTCTTTCTCACGGAAACTAATAAAG
CTTCTTGTATCATACGTGGCGCTTTACCTGGATTCGCATTTCTGACGTGT
TACGCTCCTTTGTTTTTAAAAACAAACCGTATCTATCGGATCTTTTTCAG
CGCACGTGTTTCCGTATCTCGACCATCATTGGTTAGTTCCCAGTCCCAGT
TCGCAGCTTTGTTCGGTGTTTTAGCTGTCCAGATTATCTTGAGTATCGTT
TGGTTCACGTCACAGATTCCTATCCCCGAATCGCAGGTTTCAAAATCCGG
AAATTACGTCACCATTCATTGTAGCTCTGATTCCAATCCAGTTCTCATGA
TCCTGAACCTCTCATTAAGCGTCTTGTTCATGATCTGCTGCACCGTGTTA
GCCTTCAAGACGCGACGTTTCCCGAAGAATTACAACGAGGCTAAATACAT
TGGTCTCACTTTGTACATAACCTGCGTCGTATGGTCACTTTTCCTACCAA
TCTTCTTTCTAACGCGTTCGGTCGATTATGATTTCCTTCGTGAATACCTA
ATGTGTATCGTATGTATTTTGATCGGTTTTGTCACGCTTTTCGGAATGTT
TGGACCAAAGATCATTATGATATATCATGCGCCGCCACAGGGATCGAGCC
AAGGAAGCCTCCCGACATGGTATATAACAAATTCAAGAGACGAAACAGAA
CATGACCGTGAAAATACCGCTTTCACAACCATAACACCTGAGCGATCTTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067831-exon-scaffold_476-1575043694:162158..162358 | TCONS_00067831-exon-scaffold_476-1575043694:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1575043694:159839..160985 | TCONS_00067831-exon-scaffold_476-1575043694:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1575043694:156285..158117 | TCONS_00067831-exon-scaffold_476-1575043694:156285..158117 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:162158..162358 | TCONS_00067831-exon-scaffold_476-1510915933:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:159839..160985 | TCONS_00067831-exon-scaffold_476-1510915933:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1510915933:156285..158117 | TCONS_00067831-exon-scaffold_476-1510915933:156285..158117 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:162158..162358 | TCONS_00067831-exon-scaffold_476-1491911889:162158..162358 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:159839..160985 | TCONS_00067831-exon-scaffold_476-1491911889:159839..160985 | Clytia hemisphaerica | exon |
| TCONS_00067831-exon-scaffold_476-1491911889:156285..158117 | TCONS_00067831-exon-scaffold_476-1491911889:156285..158117 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:156285..162358 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
BLAST of TCONS_00067831 vs. Swiss-Prot (Human)
Match: GRM3 (Metabotropic glutamate receptor 3 OS=Homo sapiens GN=GRM3 PE=1 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 3.766e-88 Identity = 244/866 (28.18%), Postives = 398/866 (45.96%), Query Frame = 3
Query: 171 DQSLKKKIIRGQGGFEVIGVFPFNEINKRSE----VDLQNGVMLAEAMRFTIQQVNKLD-ILHGYKFNLTSMFNCQTEFCVREK-------------------------IRDTFLTKTQFLIGPYSSETSYYGSILTDTFQLPSISY---SATYSDFGRYGLMQRYMYRTVPSDDYRILAALQFIRQSNWTYVGVISSHGYDGERDAILFIRKLSKYGACLSSQRKIPNYEDTEKHYENIIEEMLSETRLSVLVLFTTNKDTRNIFRVLKAKKLESRFTILCMYGCTNYLDVVNGNQDIANGTLSMYIHNTEVEEFKSWFLRLKPENHPFGDLYFNTFWENVFHCHVNESENVKLYDKKCTMNEQLDVGQGYYPSTPIHTVLDAVYGMALATKNFIENTCNEFEYRKLELNKNVSIGTAKRICYIGAQRIHKNSKHVRDELLKLVYKDGTLRISDPGNPNDGSRKSTIQYD-----ISRY---SYDQTTGQSNIEPVWTWKVQRDENTTSAEVEKKFLAKSEWFMRRHSAQNFGVCSMPCGIGQYMEHDQNYVRAKCCWTCRKC-PTDHIVVNNTCIECKNTEFPDEQHTRCLSLPIKAITWGSNXXXXXXXXXXXXGLFLTICVALIFSKNNDNRIVRASGRDLCYTIMFGICMIFVCPFLFLTETNKASCIIRGALPGFAFLTCYAPLFLKTNRIYRIFFXXXXXXXXXXXXXXXXXFAALFGVLAVQIILSIVWFTSQIP-IPESQVSKSGNYVTIHCS-SDSNPVLMILNLSLSVLFMICCTVLAFKTRRFPKNYNEAKYIGLTLYITCVVWSLFLPIFFLTRSVDYDFLREYLMCIVCILIGFVTLFGMFGPKIIMIYHAP 2636
D + ++ I+ +G + G+FP NE +E ++ G+ EAM F I ++NK D +L G K + + C + E+ I++ +IG S S + L FQ+P ISY SA SD RY Y RTVP D Y+ A + +R NWTYV ++S G GE F ++ C+++ K+ + K Y+++I E+L + V+VLF + D+R + + A + + FT + G ++ G++ +A G +++ + + V +F +F L P N+ + +F FWE F C + N + + C + +D Y + I V++AVY MA A C ++C A +I K +D LLK+ + + P NPN + S +++D + RY ++ G+ + V W + S + + S+ CS PC + V CCW C C P +++ TC++C + ++P T C LP I W + +I V + +G T V +F K+N+ +V+ASGR+LCY ++FG+ + + F F+ + + C +R G +F CY+ L KTN I RIF + RP +S SQ G++ VQI++ VW + P +++ V + C+ DS+ M+++L+ V+ +I CTV AFKTR+ P+N+NEAK+IG T+Y TC++W FLPIF++T S DY ++ MCI L GFV L +F PK+ +I P
Sbjct: 25 DHNFLRREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYD----YFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIATAEKV-GRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSREL--IAAASRANASFTWVASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNN-HRNPWFRDFWEQKFQCSLQNKRN---HRRVCDKHLAID-SSNYEQESKIMFVVNAVYAMAHALHKMQRTLCP----------------NTTKLC--DAMKILDGKKLYKDYLLKINF-------TAPFNPNKDA-DSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHWSRNSVPTSQ-------------CSDPCAPNEMKNMQPGDV---CCWICIPCEPYEYLADEFTCMDCGSGQWPTADLTGCYDLPEDYIRW-EDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYCMTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSSQVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSS---MLISLTYDVILVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSS-DYR-VQTTTMCISVSLSGFVVLGCLFAPKVHIILFQP 830
The following BLAST results are available for this feature:
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