TCONS_00070297-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070297-protein
Unique Name	TCONS_00070297-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	592

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070297-protein ID=TCONS_00070297-protein|Name=TCONS_00070297-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MDVGELLKYQPPTAGNKRTRAPAAFEKRPRSKKIKESEIDEGGGYQFKKI
LKKPDNTHAQERRPQVEKEVAQHRQETIQRRGDGPITEDDKEKLLALVEN
DDEGEAVDEATIKKHILSFEKKVTKNQEMRIKFVDQPNRFMESELELHEE
IQKLHVLATVPEYYDIFVRLNSVATCLNLMNHENSDISIGIVDLLQELTD
IDTLNESEDEANILVDALLKGQLVTVLLQNLHRLDERVKEDADGVHNTLA
IIENIAEFRPEVCVTAGQQGLLTWLLKRLKKKMFDSNKLYSSEILAILLQ
NTEENRQLIKESNGVDPLLQALATYKGHNPNNQEEIEYMENLFNCLCSCL
LHPPNKDLFLKGEGLQLMILMLREKKMARPSALKVLAYAMTGQEGAENCH
KFVEILGLRSVFPLFMKPPKRNKKTGNSKEECEEHACSIIASLYRNLTSN
NRTRLTQKFVEDDHVKIDRLMEMYFKYQRRVQDADAKIEQEREEREEQGE
EIDDTMEDEFYLKRLDAGLFILQLIVCIMLENCCSGVSSIKQRVLKLLNQ
HGGSTKRIKQVMREYAGHIGDSTETESAENERRRLLSLIDRF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043775	XLOC_043775	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070297	TCONS_00070297	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013180	CTNNBL1_N
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 474..508
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
IPR013180	Beta-catenin-like protein 1, N-terminal	SMART	SM01156	DUF1716_2	coord: 87..192 e-value: 1.5E-53 score: 193.9
IPR013180	Beta-catenin-like protein 1, N-terminal	PFAM	PF08216	CTNNBL	coord: 93..191 e-value: 6.6E-35 score: 119.3
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 94..277 e-value: 2.4E-6 score: 26.5 coord: 278..550 e-value: 2.5E-15 score: 56.0
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 222..451

Blast

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BLAST of TCONS_00070297-protein vs. Swiss-Prot (Human)
Match: CTBL1 (Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1)

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 321/598 (53.68%), Postives = 427/598 (71.40%), Query Frame = 0

Query:    1 MDVGELLKYQPPTAGNKRTRAPAAFEKRPRSKKIKESEIDEGGGYQFKKILKKPDNTHAQERRPQVEKEVAQHRQETIQRRGDGPITEDDKEKLLALVENDDEGE-----AVDEATIKKHILSFEKKVTKNQEMRIKFVDQPNRFMESELELHEEIQKLHVLATVPEYYDIFVRLNSVATCLNLMNHENSDISIGIVDLLQELTDIDTLNESEDEANILVDALLKGQLVTVLLQNLHRLDERVKEDADGVHNTLAIIENIAEFRPEVCVTAGQQGLLTWLLKRLKKKM-FDSNKLYSSEILAILLQNTEENRQLIKESNGVDPLLQALATYKGHNPNNQEEIEYMENLFNCLCSCLLHPPNKDLFLKGEGLQLMILMLREKKMARPSALKVLAYAMTGQEGAENCHKFVEILGLRSVFPLFMKPPKRNKKTGNSKEECEEHACSIIASLYRNLTSNNRTRLTQKFVEDDHVKIDRLMEMYFKYQRRVQDADAKIEQEREEREEQGEEIDDTMEDEFYLKRLDAGLFILQLIVCIMLENCCSGVSSIKQRVLKLLNQHGGSTKRIKQVMREYAGHIGDSTETESAENERRRLLSLIDRF 592
            MDVGELL YQP    N+ T       KRPR  + +E           +K+ +K   T  + R  + E  V +               +DDK++LL +++ D E E      +DE+++KK IL+FEK+  KNQE+RIKF D P +FMESEL+L++ IQ++HV+AT+P+ Y + V LN+V + L L+ H+N+D+SI +VDLLQELTDIDTL+ESE+ A +L+DAL+ GQ+V +L+QNL RLDE VKE+ADGVHNTLAI+EN+AEFRPE+C    QQGLL WLLKRLK KM FD+NKLY SE+LAILLQ+ +ENR+L+ E +G+D LLQ L+ +K HNP+  EE E MENLF+ LCSCL+   N++ FLKGEGLQLM LMLREKK++R SALKVL +AM G EG +NCHKFV+ILGLR++FPLFMK P++ KK G +++E EEH CSI+ASL RNL    RTRL  KF E+D  K+DRLME++FKY   +Q AD KIE E+ +   +GE ID+  E+EFYL+RLDAGLF+LQ I  IM E C + V  I+QRV ++LN  G S K ++ +++EYA +IGD    E  ENE++R+L L++ F
Sbjct:    1 MDVGELLSYQP----NRGT-------KRPRDDEEEE-----------QKMRRKQTGTRERGRYREEEMTVVEE-------------ADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHAMIGPEGTDNCHKFVDILGLRTIFPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRENEQKRILGLLENF 563

The following BLAST results are available for this feature:

BLAST of TCONS_00070297-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070297-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CTBL1	0.000e+0	53.68	Beta-catenin-like protein 1 OS=Homo sapiens GN=CTN...	[more]

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TCONS_00070297-protein (polypeptide) - C. hemisphaerica