TCONS_00071094-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071094-protein
Unique NameTCONS_00071094-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071094-protein ID=TCONS_00071094-protein|Name=TCONS_00071094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MGAILTTPTKSGKGETNFEPNNNNLKQNILNEKHNHQESKKSVPFSKMNI
VQECFPAFTGKDNKFLNEKVPSYWSKTSNRKKNKQKLFNDTVQQQQQQQQ
QVLNKENVAPKPKTSHEPINVIPSTDDKHKLTLCKIQHNPDKHFYGTLNL
SETLKYIGCYVYLRCRNLEGLKPSIVVGWIRSVDRNLVLSGWQEMAFISQ
PNMMVLYMLLREVIPPKVRSLAQLKALMMSTLYMCYAYNGHEISYPLKPF
LFDGDRAGFWDRCMEIINQHSDKLLKINKEPKMYNEIQLELKTFGRSLER
KDR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044176XLOC_044176Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071094TCONS_00071094Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004944CDK5_activator
IPR013763Cyclin-like
Vocabulary: Molecular Function
TermDefinition
GO:0016534cyclin-dependent protein kinase 5 activator activity
Vocabulary: Cellular Component
TermDefinition
GO:0016533cyclin-dependent protein kinase 5 holoenzyme complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex
molecular_function GO:0016534 cyclin-dependent protein kinase 5 activator activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004944Cyclin-dependent kinase 5 activatorPFAMPF03261CDK5_activatorcoord: 20..296
e-value: 4.7E-59
score: 200.7
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 149..293
e-value: 8.7E-53
score: 177.4
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 151..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..122

Blast
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BLAST of TCONS_00071094-protein vs. Swiss-Prot (Human)
Match: CD5R1 (Cyclin-dependent kinase 5 activator 1 OS=Homo sapiens GN=CDK5R1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.572e-41
Identity = 65/142 (45.77%), Postives = 100/142 (70.42%), Query Frame = 0 
Query:  151 SETLKYIGCYVYLRCRNLEGLKPSIVVGWIRSVDRNLVLSGWQEMAFISQPNMMVLYMLLREVIPPKVRSLAQLKALMMSTLYMCYAYNGHEISYPLKPFLFDGDRAGFWDRCMEIINQHSDKLLKINKEPKMYNEIQLELK 292
            SE L+ +G ++  RC  L+ L P+  V W+RSVDR+L+L GWQ+  FI+  N++ LYML R+VI  +V S  +L+A++++ LY+ Y+Y G+EISYPLKPFL +  +  FWDRC+ +IN  S K+L+IN +P  + ++  +LK
Sbjct:  149 SELLRCLGEFLCRRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSEVGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
The following BLAST results are available for this feature:
BLAST of TCONS_00071094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD5R11.572e-4145.77Cyclin-dependent kinase 5 activator 1 OS=Homo sapi... [more]
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