TCONS_00071497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071497-protein
Unique NameTCONS_00071497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071497-protein ID=TCONS_00071497-protein|Name=TCONS_00071497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MIGYEKNGIINESDYDDVISDEEAGERYSQSYRRTKSYPEELIRGGIKQI
NGSIPQMMKMLNSIPQIVIQPQTDDEESEVDSIHEDEEEEYIRLAALRSR
NNSKRLKSCGQVQSALVVMAIKDNDSIQLWRLLSRKDVDVSEFDGAGMQP
VHYACLFGNLEMLKIVIQNEGNINELTKSXFDGAGMQPVHYACLFGNLEM
LKIVIQNEGNINELTKSGDSCLDIAVREGNFEVAQYLVSKGAKIKSIVNG
MMGEKRNKRTFDGAKKNRRKLSNSNEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044398XLOC_044398Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071497TCONS_00071497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 146..175
e-value: 0.0016
score: 27.7
coord: 184..213
e-value: 0.0016
score: 27.7
coord: 217..246
e-value: 0.0043
score: 26.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 146..178
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 217..249
score: 9.912
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 184..216
score: 9.725
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 184..245
e-value: 3.6E-10
score: 40.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 23..267
e-value: 3.8E-29
score: 101.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 111..249
score: 26.735
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 124..245
NoneNo IPR availablePFAMPF13637Ank_4coord: 119..164
e-value: 3.2E-6
score: 27.5
NoneNo IPR availableCDDcd00204ANKcoord: 131..238
e-value: 8.76098E-22
score: 87.0538

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top