TCONS_00071732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071732-protein
Unique NameTCONS_00071732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071732-protein ID=TCONS_00071732-protein|Name=TCONS_00071732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MSENIASAVASNSCCSHDNKQPRSQSCIIEQSNNFPKMVDNTPRSILKKS
VSADAASIAILRESLLESKCLSISLSDTNIALSSSCDGSTTPEEPKTPTK
NVTFADDNNLSLCKVHNFVPSSEKLDQWQFNVFHQTHFKTDRLSGNQLMN
PVKGKKVIRKPNELLLCFKEPCSNDDFEQRFKYKCVALERCATRNRTLTG
IILVKNIEFHKYVAVRYTVDRWKTSDEVEACYVPNSNDGETDRFSFTLAL
PRSYKEMEFAICYKTGAHEYWDNNYNRNYKVKDALSPASLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044547XLOC_044547Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071732TCONS_00071732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005036CBM21_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005036CBM21 (carbohydrate binding type-21) domainPFAMPF03370CBM_21coord: 184..282
e-value: 8.1E-29
score: 100.0
IPR005036CBM21 (carbohydrate binding type-21) domainPROSITEPS51159CBM21coord: 178..282
score: 24.037
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 189..286
e-value: 9.6E-22
score: 76.8

Blast
[Close]
BLAST of TCONS_00071732-protein vs. Swiss-Prot (Human)
Match: PPR3C (Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.340e-22
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 0 
Query:  100 KNVTFADDNNLSLCKVHNF--VPSSEKLDQWQFNVFHQTHFKTDRLSGNQLMNPVKGKKVIRKPNELLLCFKEPCSND-DFEQRFKYKCVALERCATRNRTLTGIILVKNIEFHKYVAVRYTVDRWKTSDEVEACYVPNSNDG-ETDRFSFTLALP---RSYKEMEFAICYKTGAHEYWDNNYNRNYKV 281
            K V FAD   LSL  +H F  +P     D            + D L  N + + +K      +   L+L F +P ++   F   F+   V LE C+ + RT+TG + VKN+ F K V +R T D WK   +V+  Y+ N   G ++D FSF + LP    + +++EF I Y      +WDNN  +NY++
Sbjct:   83 KRVVFADSKGLSLTAIHVFSDLPEEPAWD-----------LQFDLLDLNDISSALKH----HEEKNLILDFPQPSTDYLSFRSHFQKNFVCLENCSLQERTVTGTVKVKNVSFEKKVQIRITFDSWKNYTDVDCVYMKNVYGGTDSDTFSFAIDLPPVIPTEQKIEFCISYHANGQVFWDNNDGQNYRI 256
The following BLAST results are available for this feature:
BLAST of TCONS_00071732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPR3C1.340e-2232.28Protein phosphatase 1 regulatory subunit 3C OS=Hom... [more]
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