TCONS_00071772-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071772-protein
Unique NameTCONS_00071772-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071772-protein ID=TCONS_00071772-protein|Name=TCONS_00071772-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MKKRFLKTCSRYVWSKMMSDEEKIDISGEEDEDGSGPQTFATLAEKRAHH
NALERKRRDHIKESFSGLRDSIPSLEGEKSSRAQILHKATEHIQYMRRKN
HAHQTDIDELKRHNMILDQQVRELENSRATGTVTIDATAAALLGSASELL
LNTSDDKSMNSSSETVVKTEPVLIERPNNAGDHDDYTIAPKKAKVEPE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044560XLOC_044560Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071772TCONS_00071772Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 51..102
e-value: 2.9E-13
score: 60.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 44..113
e-value: 9.1E-17
score: 60.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 46..96
e-value: 6.9E-16
score: 57.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 45..96
score: 15.281
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 45..101
e-value: 1.55162E-12
score: 58.3795
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 45..124

Blast
[Close]
BLAST of TCONS_00071772-protein vs. Swiss-Prot (Human)
Match: MAX (Protein max OS=Homo sapiens GN=MAX PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.807e-47
Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 0 
Query:   18 MSDEEKIDISGEEDEDGSGPQTFATLAEKRAHHNALERKRRDHIKESFSGLRDSIPSLEGEKSSRAQILHKATEHIQYMRRKNHAHQTDIDELKRHNMILDQQVRELENSRATGTV 133
            MSD + I++  +E++    P+ F + A+KRAHHNALERKRRDHIK+SF  LRDS+PSL+GEK+SRAQIL KATE+IQYMRRKNH HQ DID+LKR N +L+QQVR LE +R++  +
Sbjct:    1 MSDNDDIEVESDEEQ----PR-FQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALEKARSSAQL 111
The following BLAST results are available for this feature:
BLAST of TCONS_00071772-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAX5.807e-4762.93Protein max OS=Homo sapiens GN=MAX PE=1 SV=1[more]
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