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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00071867-protein ID=TCONS_00071867-protein|Name=TCONS_00071867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1346bp
MITLLTIISAVLTVASGREIYFSKSKQSRDVLDCGNIKTPCRTLAHALRI
AKNKDTITFLCNQEKNACKFRLRRRIDIFNKDLIIKSSGDNPQTPIFYFE
TGEVFQLRGGRVKLTFSNITIHLRRSVGNILNGESRVVFKQCSILVKKRR
YSLGIPSSLKFIRVNGNAVLKLYLIDSTVVHLKFDRLRILNLMLADDLGR
SVDVYIFNSNINGNIVATFKTSGTGRIHVSGTKFNYTTLSIEGTDQATKT
WSSIKIIDSEINNGLLNQQLLLKNLKDVRMQNVTLKGSENVNSLRAQSTS
SLIISGFKVLTRMAHISNIDHLVIQKASFTRSNLIIQECKTVMLATSDLK
DTDVLIQKIQFLQSNDDTYENSELKVLHSRMVIINSGKYTTSYDQLISFT
RSTGVIRNAIISHRPLRVLNSKLTIMSSRFSNNTAIEGKGGGAILSQNST
LVINDTVFHNCSAKYFGGCYYSTDKGSTLQINRVKFESYINEIANPSLFG
SSIYSTTTVDLNDVDFLLHNITRSPIVFIKEHQETLACDQKISSLGDFKL
QCPSDQTVHQEIHFNERNDLCDTNNFDFLTISCVPCNPGFINPLKATSTN
RKKDVTFINNKCTSCANETYVETYRNQTGYEVNCPLVVNIVPAAATPSHK
CANNHTMIYDPQCPYGFHFSIFSNECLHHRLFNTYHAFIFWCCLMVIGSL
YAVILMYIKEIVVMLRIKHVFLQLKIVFEYCCCCCGCSDEDDGFRLQESP
DIIDDEFDLVILKPDQVQIMPLRFTMGTTLGIIKILFFFYQVESLIRVPC
PFKEDVEITVLSIIRDSISTIMSLRLQYFVKGLHLIPEKNFTENGKEIIK
ATFGLWLLIPVLLILIGALMGYINKKCQPRDRYQISEGSMSREDSVVSDD
EETVEDNNNKLPQNEISKDIPQTIREGEILEIPIPKLKVQPMKRRFDRID
GKVPIYVEKPLAFRVKCFLLLLLTLVYLPIATLILKSIDCTENTKGLNVL
TTQQDIQCYQGVQIFAMILIALWVIPFPLAVYFASIMQYTCKINPRELFI
SLLCPPSLIFFYARGKLSKYRRTINKEDAMMAKHLLMTLYESFRLQKRDR
RFDVMWDVSYLARKLVLMVLIVFSPNRIRLYLVAAFLVFCILLQIKIKPF
SRDLTNRLEFLSLVTLCFLTVANIFWEKQNTCVDQTMLSIFQVFFVYAEY
SIICAPFLIAIFSVPLAYLLAFICMFRDRHSEEGGEERQSLRSAPSDEKD
WQYPNEEEKADGNGAVEKSRKTSTVSATGLVFNEDGHWVGTQETGLERSG
ENLIISPRREARLSDDEALLGNEGNGSGLDDEKDTLIFNDIGHSTV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012332 | P22_tailspike_C-like |
| IPR011050 | Pectin_lyase_fold/virulence |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR012332 | P22 tailspike C-terminal domain-like | GENE3D | 2.160.20.20 | | coord: 335..530
e-value: 4.3E-8
score: 31.7
coord: 51..334
e-value: 0.047
score: 11.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 886..912 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1235..1270 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1315..1334 |
| IPR011050 | Pectin lyase fold/virulence factor | SUPERFAMILY | 51126 | Pectin lyase-like | coord: 5..290 |
Blast
The following BLAST results are available for this feature:
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