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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=transcript|length=5001bp
GGAAAAGGAAGAAGCAAAGCCGGTCAAAAGGTTTTTGTTTCTAAAAGATT
TTTCGTTAGTCTCGTTGTTGGAGGTTATCCgtttttggaaatcaaattCG
CTCAGTCCCATAAAAACATCTAAGGGAGGCTATAGAGTTCAGATCACAAT
CACAATCGATAGGGcagatatattttttattttgaagaaaatggcGTAAA
AATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGttgcCAGCG
GACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGAGATGTGCTCGAT
TGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCATGCTCTAAGAAT
CGCCAAGAATAAAGACACCATCACATTCCTTTGCAACCAGGAAAAGAATG
CCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTCAATAAGGATTTG
ATCATCAAAAGCTCTGGTGATAATCCACAAACACCGATATTCTACTTCGA
GACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCAAACTGACATTCT
CGAATATTACAATCCATCTCCGGAGATCTGTCGGCAACATCCTGAACGGT
GAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGTAAAGAAACGACG
TTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCCGTGTCAATGGGA
ACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTGGTTCATTTGAAA
TTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGACGACTTGGGACG
ATCGGTGGATGTTTACATCTTCAACAGCAACATCAATGGTAATATCGTGG
CAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTCTCGGGAACCAAA
TTTAACTACACCACACTGTCAATCGAGGGTACAGACCAAGCAACCAAAAC
CTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACAATGGTCTTTTGA
ACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGCATGCAAAACGTT
ACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGCACAATCAACCTC
AAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAATGGCTCACATCT
CAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTCACCAGATCTAAT
CTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAACATCGGACCTGAA
AGACACCGACGTGTTGATACAAAAAATCCAGTTCTTACAATCTAACGACG
ATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCCAGAATGGTAATC
ATTAACTCTGGTAAGTATACCACGTCTTATGATCAACTTATATCGTTCAC
TCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCCATCGTCCATTGC
GTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGATTTTCAAATAAT
ACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAGCCAGAACTCAAC
CCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAGCAAAATATTTCG
GTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTACAAATAAATAGA
GTCAAATTCGAATCTTACATAAATGAGATTGCAAACCCTTCATTATTCGG
AAGCTCCATATACTCGACAACAACAGTGGACTTGAATGACGTGGATTTTC
TCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATCAAGGAGCACCAA
GAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGGTGATTTCAAACT
ACAATGTCCATCAGACCAAACAGTTCACCAAGAGATACACTTTAACGAGC
GAAACGATTTATGCGATACCAACAATTTCGATTTCTTAACCATCTCATGT
GTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGCGACTTCCACGAA
TAGAAAAAAGGACGTTACATTTATAAACAATAAATGCACGAGCTGCGCTA
ATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGATATGAAGTAAAC
TGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCACGCCATCGCACAA
GTGCGCCAACAACCACACCATGATTTACGATCCACAATGTCCGTACGGTT
TCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCACCGACTTTTTAAT
ACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGTCATCGGATCTTT
ATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTGTTATGTTAAGAA
TCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAATATTGTTGCTGC
TGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCTTCAAGAAAGCCC
TGATATTATCGATGATGAATTTGATTTAGTGATCCTCAAACCTGACCAAG
TCCAAATCATGCCTTTGAGATTCACCATGGGGACTACACTGGGGATTATC
AAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCATCCGAGTACCCTG
CCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTATTATTAGAGACA
GCATATCAACAATAATGTCATTGCGATTGCAGTATTTTGTGAAAGGACTG
CATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAAAGAAATTATCAA
AGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTATTGATCCTGATTG
GTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCAAGAGATAGATAT
CAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGTGGTATCTGATGA
TGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTCAGAACGAGATTT
CAAAGGATATTCCACAGACCATACGTGAAGGTGAGATACTAGAGATCCCA
ATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTTCGACCGTATCGA
TGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCATTCCGCGTGAAAT
GTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCTATCGCTACCTTG
ATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGGTCTAAATGTTTT
AACCACACAACAAGACATTCAATGTTACCAGGGCGTCCAAATATTTGCCA
TGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTAGCAGTCTACTTT
GCGTCTATTATGCAATACACGTGTAAGATAAACCCACGTGAACTTTTCAT
CTCACTACTATgtccaccatctttgattttcttctATGCACGTGGGAAAC
TATCAAAATACCGGCGCACGATCAATAAAGAGGACGCAATGATGGCGAAA
CATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCAAAAAAGAGACCG
CCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCCGGAAACTTGTTT
TAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGATTGTATTTGGTG
GCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAAGATTAAACCTTT
CAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCACTGGTCACACTCT
GCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAGAACACTTGTGTT
GATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGTGTACGCCGAATA
CTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTTCAGTACCGTTAG
CTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGCCACAGTGAGGAG
GGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTCTGATGAAAAAGA
TTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAAATGGGGCGGTCG
AGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGGTTGGTTTTCAAT
GAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCTCGAAAGAAGCGG
GGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGCTTAGTGATGATG
AAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTAGATGACGAGAAA
GACACATTGATTTTCAATGATATTGGACATTCAACTGTTTGAAGTTTGCT
TTTATCCGGTGGCTGGCTAATGGATAGTATTGTTGCAGTGAGATATAGAG
GAACAATAACACTCTTTAAAAACGatctcaaaatttaagattGGCTGTAT
TGAGTGATTATGAAACATGTTCGGTTAGGATAGCTATTTATAAATAAGCA
TAACCTTCTCAGGGGGGTCGAATTGATAGACTTTGTTCATGGCTGAAAGA
CTGATTGGTTGGTATCAGCCCGCTCAGCCGAATAACCCGCCGATTGgtat
aaaaatatgttttgcaGTAATAATTTGTTTAGGTTTGGCAATAGACTGAT
CCGGCAAAATACAGTTAGAGACTTCAAGCAAACCTCAAGCAAGCtgcctg
ttcctaactgacataaATATCACCCATGGAACAAAAAACTATGTGAAGGT
CtaaacgggaaatatttgaaGACTTTGAGTTAACAAGTCGTTACTAAACC
ATTAGTACATATTCTTTCTAccatttctaataaaaaatggctgatcgtgg
gtgaaaatgacgtcacacggaATCGGTCTATACACCATATAATCGTCTAG
TGTCtaagtaattttttttgtggACAATAGTCTATAAGATTCATATTAGG
ATCGATTGTATTTTTGAtgtaaataagattttcatGTAACTTCCATGTAT
GTTGTATTTGTGTTTTCAGAATTTGCGTACAAACAATGAAATTGTAAATA
GCGATTTAAGAGCTGATCAGCTGCCATATAAAGTTACAAACATGATTTTC
A Run BLAST on NCBI protein sequence of TCONS_00071867-protein >TCONS_00071867-protein ID=TCONS_00071867-protein|Name=TCONS_00071867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1346bp
MITLLTIISAVLTVASGREIYFSKSKQSRDVLDCGNIKTPCRTLAHALRI
AKNKDTITFLCNQEKNACKFRLRRRIDIFNKDLIIKSSGDNPQTPIFYFE
TGEVFQLRGGRVKLTFSNITIHLRRSVGNILNGESRVVFKQCSILVKKRR
YSLGIPSSLKFIRVNGNAVLKLYLIDSTVVHLKFDRLRILNLMLADDLGR
SVDVYIFNSNINGNIVATFKTSGTGRIHVSGTKFNYTTLSIEGTDQATKT
WSSIKIIDSEINNGLLNQQLLLKNLKDVRMQNVTLKGSENVNSLRAQSTS
SLIISGFKVLTRMAHISNIDHLVIQKASFTRSNLIIQECKTVMLATSDLK
DTDVLIQKIQFLQSNDDTYENSELKVLHSRMVIINSGKYTTSYDQLISFT
RSTGVIRNAIISHRPLRVLNSKLTIMSSRFSNNTAIEGKGGGAILSQNST
LVINDTVFHNCSAKYFGGCYYSTDKGSTLQINRVKFESYINEIANPSLFG
SSIYSTTTVDLNDVDFLLHNITRSPIVFIKEHQETLACDQKISSLGDFKL
QCPSDQTVHQEIHFNERNDLCDTNNFDFLTISCVPCNPGFINPLKATSTN
RKKDVTFINNKCTSCANETYVETYRNQTGYEVNCPLVVNIVPAAATPSHK
CANNHTMIYDPQCPYGFHFSIFSNECLHHRLFNTYHAFIFWCCLMVIGSL
YAVILMYIKEIVVMLRIKHVFLQLKIVFEYCCCCCGCSDEDDGFRLQESP
DIIDDEFDLVILKPDQVQIMPLRFTMGTTLGIIKILFFFYQVESLIRVPC
PFKEDVEITVLSIIRDSISTIMSLRLQYFVKGLHLIPEKNFTENGKEIIK
ATFGLWLLIPVLLILIGALMGYINKKCQPRDRYQISEGSMSREDSVVSDD
EETVEDNNNKLPQNEISKDIPQTIREGEILEIPIPKLKVQPMKRRFDRID
GKVPIYVEKPLAFRVKCFLLLLLTLVYLPIATLILKSIDCTENTKGLNVL
TTQQDIQCYQGVQIFAMILIALWVIPFPLAVYFASIMQYTCKINPRELFI
SLLCPPSLIFFYARGKLSKYRRTINKEDAMMAKHLLMTLYESFRLQKRDR
RFDVMWDVSYLARKLVLMVLIVFSPNRIRLYLVAAFLVFCILLQIKIKPF
SRDLTNRLEFLSLVTLCFLTVANIFWEKQNTCVDQTMLSIFQVFFVYAEY
SIICAPFLIAIFSVPLAYLLAFICMFRDRHSEEGGEERQSLRSAPSDEKD
WQYPNEEEKADGNGAVEKSRKTSTVSATGLVFNEDGHWVGTQETGLERSG
ENLIISPRREARLSDDEALLGNEGNGSGLDDEKDTLIFNDIGHSTV Run BLAST on NCBI transcript from alignment at scaffold_64:27037..32299- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=transcript|length=5263bp|location=Sequence derived from alignment at scaffold_64:27037..32299- (Clytia hemisphaerica)
GGAAAAGGAAGAAGCAAAGCCGGTCAAAAGGTTTTTGTTTCTAAAAGATT
TTTCGTTAGTCTCGTTGTTGGAGGTTATCCGTTTTTGGAAATCAAATTCG
CTCAGTCCCATAAAAACATCTAAGGGAGGCTATAGAGTTCAGATCACAAT
CACAATCGATAGGGCAGATATATTTTTTATTTTGAAGAAAATGGCGTAAA
AATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGGTAAGAAAA
GCCATTGAAATAATCAAATAAAATAATGCTGATAAACTTTGCACGGCTCA
TGTAATGACCAGGCACAAAGGTGTCAACTCTAAAACTGGTTGAAAGTAAA
TTTACAAAATAAGGAATACTCTAAAAAGCGGGCATTAATTTTCGCCCTGG
TGATAGCACTATTTTTTGGCTTTCGTATCTAATGTAGACCGATGATGTCG
GATCCGTTGTAAATTTTATTCAATTTCATTTCTTCATGTTTTTTTCTTTT
TAGTTGCCAGCGGACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGA
GATGTGCTCGATTGCGGTAACATTAAAACACCATGCCGAACGTTGGCGCA
TGCTCTAAGAATCGCCAAGAATAAAGACACCATCACATTCCTTTGCAACC
AGGAAAAGAATGCCTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTC
AATAAGGATTTGATCATCAAAAGCTCTGGTGATAATCCACAAACACCGAT
ATTCTACTTCGAGACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCA
AACTGACATTCTCGAATATTACAATCCATCTCCGGAGATCTGTCGGCAAC
ATCCTGAACGGTGAATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGT
AAAGAAACGACGTTACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCC
GTGTCAATGGGAACGCCGTTTTGAAACTATACCTCATAGACAGTACTGTG
GTTCATTTGAAATTTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGA
CGACTTGGGACGATCGGTGGATGTTTACATCTTCAACAGCAACATCAATG
GTAATATCGTGGCAACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTC
TCGGGAACCAAATTTAACTACACCACACTGTCAATCGAGGGTACAGACCA
AGCAACCAAAACCTGGTCAAGCATTAAGATAATAGATTCGGAAATCAACA
ATGGTCTTTTGAACCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGC
ATGCAAAACGTTACTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGC
ACAATCAACCTCAAGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAA
TGGCTCACATCTCAAACATAGACCACCTGGTCATTCAAAAAGCATCCTTC
ACCAGATCTAATCTCATTATCCAGGAATGCAAGACAGTCATGCTGGCAAC
ATCGGACCTGAAAGACACCGACGTGTTGATACAAAAAATCCAGTTCTTAC
AATCTAACGACGATACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCC
AGAATGGTAATCATTAACTCTGGTAAGTATACCACGTCTTATGATCAACT
TATATCGTTCACTCGCTCCACTGGTGTTATACGAAATGCAATCATCTCCC
ATCGTCCATTGCGTGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGA
TTTTCAAATAATACAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAG
CCAGAACTCAACCCTGGTTATAAATGACACAGTCTTCCATAACTGTTCAG
CAAAATATTTCGGTGGATGTTACTACAGCACGGATAAAGGAAGCACTTTA
CAAATAAATAGAGTCAAATTCGAATCTTACATAAATGAGATTGCAAACCC
TTCATTATTCGGAAGCTCCATATACTCGACAACAACAGTGGACTTGAATG
ACGTGGATTTTCTCCTTCACAATATAACCAGAAGTCCTATCGTTTTCATC
AAGGAGCACCAAGAAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGG
TGATTTCAAACTACAATGTCCATCAGACCAAACAGTTCACCAAGAGATAC
ACTTTAACGAGCGAAACGATTTATGCGATACCAACAATTTCGATTTCTTA
ACCATCTCATGTGTACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGC
GACTTCCACGAATAGAAAAAAGGACGTTACATTTATAAACAATAAATGCA
CGAGCTGCGCTAATGAAACTTACGTCGAGACGTATCGCAACCAAACCGGA
TATGAAGTAAACTGCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCAC
GCCATCGCACAAGTGCGCCAACAACCACACCATGATTTACGATCCACAAT
GTCCGTACGGTTTCCATTTTAGTATTTTCTCAAACGAATGTCTTCACCAC
CGACTTTTTAATACGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGT
CATCGGATCTTTATACGCCGTCATTCTAATGTACATCAAAGAAATTGTTG
TTATGTTAAGAATCAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAA
TATTGTTGCTGCTGTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCT
TCAAGAAAGCCCTGATATTATCGATGATGAATTTGATTTAGTGATCCTCA
AACCTGACCAAGTCCAAATCATGCCTTTGAGATTCACCATGGGGACTACA
CTGGGGATTATCAAGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCAT
CCGAGTACCCTGCCCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTA
TTATTAGAGACAGCATATCAACAATAATGTCATTGCGATTGCAGTATTTT
GTGAAAGGACTGCATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAA
AGAAATTATCAAAGCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTAT
TGATCCTGATTGGTGCTTTAATGGGATATATCAATAAGAAGTGTCAACCA
AGAGATAGATATCAAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGT
GGTATCTGATGATGAGGAGACTGTGGAAGATAACAATAATAAATTGCCTC
AGAACGAGATTTCAAAGGATATTCCACAGACCATACGTGAAGGTGAGATA
CTAGAGATCCCAATACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTT
CGACCGTATCGATGGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCAT
TCCGCGTGAAATGTTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCT
ATCGCTACCTTGATTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGG
TCTAAATGTTTTAACCACACAACAAGACATTCAATGTTACCAGGGCGTCC
AAATATTTGCCATGATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTA
GCAGTCTACTTTGCGTCTATTATGCAATACACGTGTAAGATAAACCCACG
TGAACTTTTCATCTCACTACTATGTCCACCATCTTTGATTTTCTTCTATG
CACGTGGGAAACTATCAAAATACCGGCGCACGATCAATAAAGAGGACGCA
ATGATGGCGAAACATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCA
AAAAAGAGACCGCCGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCC
GGAAACTTGTTTTAATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGA
TTGTATTTGGTGGCTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAA
GATTAAACCTTTCAGCCGTGATCTAACGAACCGTCTTGAATTTTTATCAC
TGGTCACACTCTGCTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAG
AACACTTGTGTTGATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGT
GTACGCCGAATACTCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTT
CAGTACCGTTAGCTTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGC
CACAGTGAGGAGGGCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTC
TGATGAAAAAGATTGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAA
ATGGGGCGGTCGAGAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGG
TTGGTTTTCAATGAAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCT
CGAAAGAAGCGGGGAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGC
TTAGTGATGATGAAGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTA
GATGACGAGAAAGACACATTGATTTTCAATGATATTGGACATTCAACTGT
TTGAAGTTTGCTTTTATCCGGTGGCTGGCTAATGGATAGTATTGTTGCAG
TGAGATATAGAGGAACAATAACACTCTTTAAAAACGATCTCAAAATTTAA
GATTGGCTGTATTGAGTGATTATGAAACATGTTCGGTTAGGATAGCTATT
TATAAATAAGCATAACCTTCTCAGGGGGGTCGAATTGATAGACTTTGTTC
ATGGCTGAAAGACTGATTGGTTGGTATCAGCCCGCTCAGCCGAATAACCC
GCCGATTGGTATAAAAATATGTTTTGCAGTAATAATTTGTTTAGGTTTGG
CAATAGACTGATCCGGCAAAATACAGTTAGAGACTTCAAGCAAACCTCAA
GCAAGCTGCCTGTTCCTAACTGACATAAATATCACCCATGGAACAAAAAA
CTATGTGAAGGTCTAAACGGGAAATATTTGAAGACTTTGAGTTAACAAGT
CGTTACTAAACCATTAGTACATATTCTTTCTACCATTTCTAATAAAAAAT
GGCTGATCGTGGGTGAAAATGACGTCACACGGAATCGGTCTATACACCAT
ATAATCGTCTAGTGTCTAAGTAATTTTTTTTGTGGACAATAGTCTATAAG
ATTCATATTAGGATCGATTGTATTTTTGATGTAAATAAGATTTTCATGTA
ACTTCCATGTATGTTGTATTTGTGTTTTCAGAATTTGCGTACAAACAATG
AAATTGTAAATAGCGATTTAAGAGCTGATCAGCTGCCATATAAAGTTACA
AACATGATTTTCA Coding sequence (CDS) from alignment at scaffold_64:27037..32299- >TCONS_00071867 ID=TCONS_00071867|Name=TCONS_00071867|organism=Clytia hemisphaerica|type=CDS|length=4041bp|location=Sequence derived from alignment at scaffold_64:27037..32299- (Clytia hemisphaerica)
ATGATAACACTGTTAACCATTATTTCAGCTGTCTTAACAGTTGCCAGCGG
ACGAGAAATCTATTTCTCCAAATCGAAGCAAAGTCGAGATGTGCTCGATT
GCGGTAACATTAAAACACCATGCCGAACGTTGGCGCATGCTCTAAGAATC
GCCAAGAATAAAGACACCATCACATTCCTTTGCAACCAGGAAAAGAATGC
CTGCAAATTTCGATTAAGAAGGAGAATCGATATCTTCAATAAGGATTTGA
TCATCAAAAGCTCTGGTGATAATCCACAAACACCGATATTCTACTTCGAG
ACTGGTGAAGTGTTCCAATTGAGAGGTGGACGTGTCAAACTGACATTCTC
GAATATTACAATCCATCTCCGGAGATCTGTCGGCAACATCCTGAACGGTG
AATCTAGAGTTGTCTTCAAACAATGCTCAATCTTGGTAAAGAAACGACGT
TACTCTTTGGGAATTCCAAGCAGTTTGAAATTTATCCGTGTCAATGGGAA
CGCCGTTTTGAAACTATACCTCATAGACAGTACTGTGGTTCATTTGAAAT
TTGACAGGCTTCGGATCCTAAACCTAATGCTAGCAGACGACTTGGGACGA
TCGGTGGATGTTTACATCTTCAACAGCAACATCAATGGTAATATCGTGGC
AACTTTTAAAACAAGTGGTACTGGGCGTATTCATGTCTCGGGAACCAAAT
TTAACTACACCACACTGTCAATCGAGGGTACAGACCAAGCAACCAAAACC
TGGTCAAGCATTAAGATAATAGATTCGGAAATCAACAATGGTCTTTTGAA
CCAACAACTCTTATTAAAGAATCTCAAAGACGTTCGCATGCAAAACGTTA
CTCTCAAAGGTAGTGAGAATGTTAACTCGCTAAGAGCACAATCAACCTCA
AGTCTTATCATCAGTGGTTTCAAAGTGCTCACACGAATGGCTCACATCTC
AAACATAGACCACCTGGTCATTCAAAAAGCATCCTTCACCAGATCTAATC
TCATTATCCAGGAATGCAAGACAGTCATGCTGGCAACATCGGACCTGAAA
GACACCGACGTGTTGATACAAAAAATCCAGTTCTTACAATCTAACGACGA
TACGTACGAAAACAGCGAGTTGAAGGTTTTGCATTCCAGAATGGTAATCA
TTAACTCTGGTAAGTATACCACGTCTTATGATCAACTTATATCGTTCACT
CGCTCCACTGGTGTTATACGAAATGCAATCATCTCCCATCGTCCATTGCG
TGTTCTTAACAGCAAATTAACCATCATGAGTTCGAGATTTTCAAATAATA
CAGCAATCGAAGGCAAAGGAGGTGGAGCGATATTGAGCCAGAACTCAACC
CTGGTTATAAATGACACAGTCTTCCATAACTGTTCAGCAAAATATTTCGG
TGGATGTTACTACAGCACGGATAAAGGAAGCACTTTACAAATAAATAGAG
TCAAATTCGAATCTTACATAAATGAGATTGCAAACCCTTCATTATTCGGA
AGCTCCATATACTCGACAACAACAGTGGACTTGAATGACGTGGATTTTCT
CCTTCACAATATAACCAGAAGTCCTATCGTTTTCATCAAGGAGCACCAAG
AAACATTAGCTTGTGACCAGAAAATCAGCTCCCTTGGTGATTTCAAACTA
CAATGTCCATCAGACCAAACAGTTCACCAAGAGATACACTTTAACGAGCG
AAACGATTTATGCGATACCAACAATTTCGATTTCTTAACCATCTCATGTG
TACCGTGTAACCCAGGCTTTATCAACCCGTTAAAAGCGACTTCCACGAAT
AGAAAAAAGGACGTTACATTTATAAACAATAAATGCACGAGCTGCGCTAA
TGAAACTTACGTCGAGACGTATCGCAACCAAACCGGATATGAAGTAAACT
GCCCACTTGTGGTCAATATCGTTCCCGCCGCAGCCACGCCATCGCACAAG
TGCGCCAACAACCACACCATGATTTACGATCCACAATGTCCGTACGGTTT
CCATTTTAGTATTTTCTCAAACGAATGTCTTCACCACCGACTTTTTAATA
CGTACCACGCATTCATCTTCTGGTGTTGTCTAATGGTCATCGGATCTTTA
TACGCCGTCATTCTAATGTACATCAAAGAAATTGTTGTTATGTTAAGAAT
CAAACACGTGTTTCTACAACTGAAAATTGTGTTCGAATATTGTTGCTGCT
GTTGCGGATGTAGTGATGAAGATGATGGTTTCCGTCTTCAAGAAAGCCCT
GATATTATCGATGATGAATTTGATTTAGTGATCCTCAAACCTGACCAAGT
CCAAATCATGCCTTTGAGATTCACCATGGGGACTACACTGGGGATTATCA
AGATCCTGTTCTTCTTTTATCAAGTGGAATCGCTCATCCGAGTACCCTGC
CCTTTTAAAGAAGACGTTGAAATAACAGTATTGTCTATTATTAGAGACAG
CATATCAACAATAATGTCATTGCGATTGCAGTATTTTGTGAAAGGACTGC
ATTTGATACCCGAGAAAAATTTCACTGAGAATGGGAAAGAAATTATCAAA
GCCACATTCGGGTTATGGCTTTTGATTCCAGTTTTATTGATCCTGATTGG
TGCTTTAATGGGATATATCAATAAGAAGTGTCAACCAAGAGATAGATATC
AAATCTCCGAAGGCTCAATGTCAAGAGAAGATAGCGTGGTATCTGATGAT
GAGGAGACTGTGGAAGATAACAATAATAAATTGCCTCAGAACGAGATTTC
AAAGGATATTCCACAGACCATACGTGAAGGTGAGATACTAGAGATCCCAA
TACCAAAATTGAAGGTTCAACCAATGAAGAGACGTTTCGACCGTATCGAT
GGTAAAGTTCCAATCTACGTCGAAAAACCGTTGGCATTCCGCGTGAAATG
TTTCTTGCTTTTACTATTGACTCTTGTTTACTTACCTATCGCTACCTTGA
TTCTAAAGAGTATTGACTGTACTGAAAACACCAAAGGTCTAAATGTTTTA
ACCACACAACAAGACATTCAATGTTACCAGGGCGTCCAAATATTTGCCAT
GATCCTCATTGCATTGTGGGTCATCCCATTCCCCTTAGCAGTCTACTTTG
CGTCTATTATGCAATACACGTGTAAGATAAACCCACGTGAACTTTTCATC
TCACTACTATGTCCACCATCTTTGATTTTCTTCTATGCACGTGGGAAACT
ATCAAAATACCGGCGCACGATCAATAAAGAGGACGCAATGATGGCGAAAC
ATTTGTTGATGACGCTTTACGAATCGTTCAGACTTCAAAAAAGAGACCGC
CGTTTTGACGTCATGTGGGATGTCTCCTATCTAGCCCGGAAACTTGTTTT
AATGGTTCTCATCGTTTTCTCACCGAACAGAATCAGATTGTATTTGGTGG
CTGCTTTTCTAGTCTTTTGTATCCTGCTCCAAATCAAGATTAAACCTTTC
AGCCGTGATCTAACGAACCGTCTTGAATTTTTATCACTGGTCACACTCTG
CTTCTTAACAGTTGCTAACATCTTTTGGGAAAAACAGAACACTTGTGTTG
ATCAGACGATGTTGAGCATATTCCAAGTTTTCTTCGTGTACGCCGAATAC
TCGATCATATGTGCGCCCTTCTTGATTGCTATCTTTTCAGTACCGTTAGC
TTATTTACTTGCCTTCATTTGTATGTTCAGAGACCGCCACAGTGAGGAGG
GCGGTGAGGAACGCCAGAGTTTAAGATCTGCGCCCTCTGATGAAAAAGAT
TGGCAATACCCAAACGAGGAAGAGAAAGCTGACGGAAATGGGGCGGTCGA
GAAAAGCCGGAAAACGAGTACTGTGAGTGCTACTGGGTTGGTTTTCAATG
AAGATGGACATTGGGTTGGTACGCAGGAGACTGGGCTCGAAAGAAGCGGG
GAAAACTTGATTATTAGCCCTAGAAGAGAAGCGAGGCTTAGTGATGATGA
AGCGTTGCTTGGAAACGAAGGTAACGGGAGTGGATTAGATGACGAGAAAG
ACACATTGATTTTCAATGATATTGGACATTCAACTGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071867-exon-scaffold_64-1575043694:32059..32299 | TCONS_00071867-exon-scaffold_64-1575043694:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1575043694:27037..31796 | TCONS_00071867-exon-scaffold_64-1575043694:27037..31796 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1510915933:32059..32299 | TCONS_00071867-exon-scaffold_64-1510915933:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1510915933:27037..31796 | TCONS_00071867-exon-scaffold_64-1510915933:27037..31796 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1491911889:32059..32299 | TCONS_00071867-exon-scaffold_64-1491911889:32059..32299 | Clytia hemisphaerica | exon |
| TCONS_00071867-exon-scaffold_64-1491911889:27037..31796 | TCONS_00071867-exon-scaffold_64-1491911889:27037..31796 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_64 | supercontig | scaffold_64:27037..32299 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012332 | P22_tailspike_C-like |
| IPR011050 | Pectin_lyase_fold/virulence |
Blast
The following BLAST results are available for this feature:
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