TCONS_00000119 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000119
Unique NameTCONS_00000119
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4916

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000119 ID=TCONS_00000119|Name=TCONS_00000119|organism=Clytia hemisphaerica|type=transcript|length=4916bp
TTTTAGTGTACTGACAGAATAATaacaaataaaagcaaaatttccaattt
tggaaaatttagatTTGTTATGAAGAAAAGGAAGTCCACTTTGTAAACAT
TGGTGAGAGTCTGGgtgaataaaaaaagaatatatttggGATATTGTTAT
TCAAAATGACTGATTTCAAATACCTTGGATTTATATTGTTAACAATCTTT
ATACTATGGTTGCCTTTTGGTCAAGCAAGCAATGAAGTATATAATTACCG
TCAGCTACGGGAATCTGACTTCCAAGGAATAGCTGATAAAATTCATACAA
AAATCCGTGATTATGCTAAAAAGACTTTACAAGCTGAGAAAATTGAAGAA
CAATTGAAGAAATTGAATTACATTGTTAAAACTGTAGATGGTCAAACATT
AGAAACGGATTTCTCAGCTGGTCTTGAATCGGTTTTTAAcggaaaacaaa
aaatcttggaaaatATTAAACATAAGGCTGAAAAAGCTGAAATGGATTAT
AATTATGATCAAACATTTGACGAAGAGCATGCTTATTTTAATATGCGTGA
TATCAAAACACAATACAATGAAAATCAATCTCTGGTAATTGTACCCAAAT
TTTCAGATAATGTTCGTGTTAATTTCACGCATAGCTTTGTACAAGTACCG
ACGAACGTGTACGCGTACAAAAAGTCCGTTTTAGATCAGGTAACATGGGG
AGCTGAATTGGATGAAACATTTGAAGGCAATTTTAAGAACTCGAGTGGAT
CGCTGTTGTATCAATACTTTGGAGATGCTTCTACAGGTATCTTCCGCATC
TTTCCTGGAAACATTATGGGAGTGAAAGAAGATGAACATAAAACGGATTT
GTACGATTGTCGGCGACGTGTGTGGTATATCCAAGCAGCTGCTAGTGCAA
AAGATATCGTCATTGTCCTCGATCTTTCTGGTTCTATGATCGGAAATAAT
ATTGGTATTGCAAAGATTGCTATCTCATCTTTGATTGACACATTACAAGa
gaatgattattttaatgtcatCACCATCAACACTGAAGTCAAATACATTG
TCCCATGTATCAAATATTTGATCCAAGCCaccaaagaaaataaagaaatg
atgAAAAGGGTAGTACAAAATCTCACGGAGGCAGCCGAAATTGTGGATGT
CAACAAAGGCATGGACGAAGCATTTAAGATACTAAATATCGGTCCTTCAA
TCAATCGTACATCTGCTGGTTGCAACAAAGCCATCATGTTCGTTACTGAC
GGGATAGAAGGAACTTACGCCGGACAAGAATCATTCGAGAAAAACAACCC
AAATAAAGATGTACGGGTATTCTCATACCTTGTCGGCCGAATCAAAAACC
CGAACGAGAAAGCACTGAAAAAGATGTCGTGTGAAAATAATggttttttc
tataaaatcgaAACATTAGGAAATATATGGGATACCGTTCTGGATTATAT
TCGGGTTATGAGTCGCCCGTTAATCCCGAATTTAAAAGACAGTGGTCGGA
AAGAACTCAAGCCAACATATACACCAGCATACCTGGATAGTGCTGGTTTT
GGCATGGTTATGACAATCTCTTTAAgcgttttcaagaaaataagtTATAT
TCATAATGAAGACCCAAATGACGTCAGATATTTGTATGAAGGTTTCTTAG
GTGTAGCTGGTACAGACATATCTTTGAAGAATTTGAAGGACCAAGTTGAT
CAATCCAAACTTGGTGTTTTTAGTCGTGGTTTTGTTATCAATAAcaatgg
ttttgttttgattcatcCGAAATTCCGTGACCAGTCTGGCTATCTTCCTG
TTCCCCCAAATGTCCTTATCGATGAGTTAGAATCAGCTCAGGATCAAGAA
GATACGAGTGCACTAAAGAAGCAAATGTTGAAATTAACGGCTGATGACCT
TGAAGGTGGTCCTGTCGAATTCATTACCCGGTCAACTTATGATGATGGTC
GAAAAGTGTATTCAGGCAAAACAAAATATTGGTATAAATTGCTTCCTGAT
GCTGATTTGGTTTCCGCCCTTGCATTGGATGAGATTGATAATACTTACTT
AGCTGTTGATGAATCGACACTCGAATTAAAGGCGATCAAGGAAAAAGGAA
TCGAAGCCTTAAAGCCACCAGTCGATGACTTTGACTATGATTATTGGAAT
TTGACAAAAACCAACACGTCATTTGTTACAATTGCACCATGGAATTATTG
CAACTTACCCGAATCATTACATAATAAACCACTTGGTATGAAATTCTACC
CAACGGTTGGCGAGATCTACACATTCATGAGTAAAAATCCAACTGATTAT
GAAAAGCATTGTAAAGATAAAGAGTTGGTAACTCGGCTTTTAGCAATGGC
TGGTGTAACGAGTGAAACTGTGGATAAAATTTGGAGTCAATTCCAGTTTG
ATGAAGACCCTGATATGATTCAAGGAGCTTTCTTTGCAACCTCCAGTGga
tatcaaaaatatttgtctTACCATAATCACACAGATCCTTCACCGCCCTT
CAATCGTGATATTTTACGGACCAAAGTATTTGAGACTCCAATCACAAACC
CGGATATTAATCTCTTTTTATCATCGTCAGCGCGTGACAAGACTGTAGGA
CCAGTAAAGATCTCAATCATGCATCCTTTTTGGAAGCAAAAGAACATTGC
AGCAGtaaccGGTATTGAAATCAACAGTCAACTCATTTACAATTACTTAA
TGGaatcggcagaaataaaaatgaCTGAATTCAGTACATTAGCTATCTGT
AAAGATACTGAGAACGCTTTTTGTGGTGTCATTGACGAACATGGATACAT
CATCACTAGCAACCAAGGAGAGGCTTACACAGGACAATTTATCGGGGAAC
GCTTAGGAGAAATAGTCGATGCTCTACCGTTCTTTACCAAAATTGAGCTT
GAAGATGCACAAGCAGAGTGTCCGCTATCAGACGAAGTTTCCGCCGCAAA
TATTTTGCTGACGCCTGCAAAATTAATTTTCGGTTTTATTACCGGGCTTT
GTAAAACATGTTATTGGTTGGTTATTCAATTTggtattgttttgatttca
ttgtTTGAGCATGCGCAAAGAGTTTATGCGGAAGTACCAAAAACAATACG
GGTAAGTTGTACCAAAACAATGCCGTTTTACCAATTCGATATGAGTAAaa
tccagaatggaaaaatattcCAGGAAACGTATAAATGTGAAGATTGTTCG
GATAAAACAAAGGACTTTAAATTAATTCGAATCAATGATACTAATACAAT
GCTATTGATGGCTGAAGCAGACTCTAATTGTTGTTATAAGAAGCGAGTTA
GTATGAATCACGTTAAAAAAGACTCGACCATTGATTGGTGTAATCCGCCC
GAGCAACCGTACAGGCGGTCGCCCGCTGTTTGTTTGAACGATACGACTTC
AAAACCGGAGAATGCTAAATGTGGCTCTGGATTTGTtgaaaaaccatcaa
ttttGGTTTTAACGATAGCTTTTATGTTAGTGTGTTTCGTTTTTGGATAA
ACCAAAGTTAAGCATCCATGTGCATAGTTATTGAGAAAAATatggaatat
ttttataaatgtggAATTTCGCTGACTTCTGGCTTAGTCAGTAGTAACTC
AATCACTGCAAACGTTTTTGTTGAGAAAATGGCTTTAATTATAAGGAACT
TTTGAAATAATGATGAAGTATCTTAAAATTTGCGGAAAAATTTGCGTTAT
AAATGATATATTACATTTCCGTAAAAAATGTTTCCGTACGTTTCTAAAAG
ATGGCAAAATAATCTGAGTAAAATAACAGAGTTGTGGAGTTACACATTTC
AAAGCTTGGGCAAAAACACATCCATCGCATATCAAGAGGATTTTCTTGGt
tatttttgagttattttacCTTAAAAGACACTAGTTTCTAGCAATGAGGA
ATGAAATTTTGGGCAACTACAATTATAATTTCCTTAAAGcaatatccaaa
aattttcaaatttacaatATAAGAATGTACTCTATAAGAATAATCAAAAT
GAAATCAGATATATTTCAAATTTAGGTCCAATTTGGATCCTTATCTAAGT
AAGAATACCTGAAGAATATTTAAGGATAATTTTTCCCaaaagagttaaaa
atttcaataatgaAATGGAGAAAGAtcattcttatgaaaaagcgtgtatg
tgcAAAATGGAATAACTATAGCGAAGGTGCCTCATTGCatgaaacaaagg
aaaaataTCAACCTATTTGGACGTCCAAATAACGTCGTTTCTACGTTAca
ttaaatttctaaaaagaaggataatttaaaaacaatgttGATCCCTTGAA
TGTGCTTTAAACAAATTACGGCTTATATTAATAGAAATAGTGTGATAAAC
CTGTAGTATTTAAGTTTTACCAAAGAAATAAGAACGAGGACAATTTTACT
CTCAGAAGTGCGACAAAAGAGCAGCTGagcctcatcaaaaatttactggt
tcttataaaaaagggtgtATAATACAAGGGCTTGCAAATGTCTGGTTTTC
CTGTATAATTACGCACTGCTGAGAAATCTTCATTCATACAATAGagcttt
atatatttttgtttacatacttactatataattattttatattattgtat
ttaatttttttttttttgaagctatAAAAATTGATATTTACCCTAAGAGG
TAGTTTCGATCCCAAGAATAGACCATTTTAACTTCTTCTAGGTGTGACAA
AAAGCTTACCTAACTAAAAATTAACAACACCAAATTTTAACCCAGTACAG
AGTTTTGAGTGAGGCCCGGGTAAAATGAAATTATATTCTTTATCCGGTCG
AAATTCGGAGATTGATTGTTTCTGCCCCGATCAATACAGCAATGGTATTA
CGCGTTTTTTTGTAAGagcatccaaaacttttgaagcccttagatgttct
taactttttggatttc
Run BLAST on NCBI

protein sequence of TCONS_00000119-protein

>TCONS_00000119-protein ID=TCONS_00000119-protein|Name=TCONS_00000119-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1114bp
MTDFKYLGFILLTIFILWLPFGQASNEVYNYRQLRESDFQGIADKIHTKI
RDYAKKTLQAEKIEEQLKKLNYIVKTVDGQTLETDFSAGLESVFNGKQKI
LENIKHKAEKAEMDYNYDQTFDEEHAYFNMRDIKTQYNENQSLVIVPKFS
DNVRVNFTHSFVQVPTNVYAYKKSVLDQVTWGAELDETFEGNFKNSSGSL
LYQYFGDASTGIFRIFPGNIMGVKEDEHKTDLYDCRRRVWYIQAAASAKD
IVIVLDLSGSMIGNNIGIAKIAISSLIDTLQENDYFNVITINTEVKYIVP
CIKYLIQATKENKEMMKRVVQNLTEAAEIVDVNKGMDEAFKILNIGPSIN
RTSAGCNKAIMFVTDGIEGTYAGQESFEKNNPNKDVRVFSYLVGRIKNPN
EKALKKMSCENNGFFYKIETLGNIWDTVLDYIRVMSRPLIPNLKDSGRKE
LKPTYTPAYLDSAGFGMVMTISLSVFKKISYIHNEDPNDVRYLYEGFLGV
AGTDISLKNLKDQVDQSKLGVFSRGFVINNNGFVLIHPKFRDQSGYLPVP
PNVLIDELESAQDQEDTSALKKQMLKLTADDLEGGPVEFITRSTYDDGRK
VYSGKTKYWYKLLPDADLVSALALDEIDNTYLAVDESTLELKAIKEKGIE
ALKPPVDDFDYDYWNLTKTNTSFVTIAPWNYCNLPESLHNKPLGMKFYPT
VGEIYTFMSKNPTDYEKHCKDKELVTRLLAMAGVTSETVDKIWSQFQFDE
DPDMIQGAFFATSSGYQKYLSYHNHTDPSPPFNRDILRTKVFETPITNPD
INLFLSSSARDKTVGPVKISIMHPFWKQKNIAAVTGIEINSQLIYNYLME
SAEIKMTEFSTLAICKDTENAFCGVIDEHGYIITSNQGEAYTGQFIGERL
GEIVDALPFFTKIELEDAQAECPLSDEVSAANILLTPAKLIFGFITGLCK
TCYWLVIQFGIVLISLFEHAQRVYAEVPKTIRVSCTKTMPFYQFDMSKIQ
NGKIFQETYKCEDCSDKTKDFKLIRINDTNTMLLMAEADSNCCYKKRVSM
NHVKKDSTIDWCNPPEQPYRRSPAVCLNDTTSKPENAKCGSGFVEKPSIL
VLTIAFMLVCFVFG
Run BLAST on NCBI

transcript from alignment at sc0000001:2303887..2314933+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000119 ID=TCONS_00000119|Name=TCONS_00000119|organism=Clytia hemisphaerica|type=transcript|length=11047bp|location=Sequence derived from alignment at sc0000001:2303887..2314933+ (Clytia hemisphaerica)
TTTTAGTGTACTGACAGAATAATaacaaataaaagcaaaatttccaattt
tggaaaatttagatTTGTTATGAAGAAAAGGAAGTCCACTTTGTAAACAT
TGGTGAGAGTCTGGgtgaataaaaaaagaatatatttggGATATTGTTAT
TCAAAATGACTGATTTCAAATACCTTGGATTTATATTGTTAACAATCTTT
ATACTATGGTTGCCTTTTGGTCAAGCAAGCAATGAAGTATATAATTACCG
TCAGCTACGGGAATCTGACTTCCAAGGAATAGCTGATAAAATTCATACAA
AAATCCGTGATTATGCTAAAAAGACTTTACAAGCTGAGAAAATTGAAGAA
CAATTGAAGAAATTGAATTACATTGTTAAAACTGTAGATGGTCAAACATT
AGAAACGGATTTCTCAGCTGGTCTTGAATCGGTTTTTAAcggaaaacaaa
aaatcttggaaaatATTAAACATAAGGCTGAAAAAGCTGAAATGGATTAT
AATTATGATCAAACATTTGACGAAGAGCATGCTTATTTTAATATGCGTGA
TATCAAAACACAATACAATGAAAATCAATCTCTGGTAATTGTACCCAAAT
TTTCAGATAATGTTCGTGTTAATTTCACGCATAGCTTTGTACAAGTACCG
ACGAACGTGTACGCGTACAAAAAGTCCGTTTTAGATCAGGTAACATGGGG
AGCTGAATTGGATGAAACATTTGAAGGCAATTTTAAGAACTCGAGTGGAT
CGCTGTTGTATCAATACTTTGGAGATGCTTCTACAGGTATGGgagatttc
actttttgatcaatttttatATATCGTGACTTTTTGGCATGTTTATACTC
ACAAGATTTGAGTCGTTTAAGGGGATTCAGAACATTtagtcaaatttcga
aaaacgtaCTTTTAGTGTCAAAACATTTTACCGACCTATAGGAGTATGCT
CTGAagatttaaagtaaaaatatcaacttgaAGGCTAGATGCGAGCTTTT
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAAGGCTGACAAGGTGCGGGAAAACCCCCTAAAACGTG
TTTTGAGAAAACGGCGCAGAAAGTTAAAAATAgaggtttttctcaatttt
tctgcgatacatagaccgatttacaaaatttttgctgtggttgaccaaaa
tggattgacacatttacttttaatgttgaaaaggtactggaaatactaaa
atagtccaagttttttgaaaaaaatggccttCCACGTGCTCCGGGAATCT
CCAAGTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCTCAAATCTGTTTATATCATTTACAGTTGAATTTCAGTGTTGAT
CTTAGGGAAACGTGTCTTCAGGTTGAACGTCAATCATGCATAGTTTTACT
CAATTTCCCAGGATCGCCTCCTGGCGCCATGAAGTGCCACGATTCATCaa
agactagatttccactggaTTTAAGACTCATAatggatacatcattgaat
gtGTTTAGTTCCTTGTTTCAAACTTTATTCATACCATGGTTCANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAAATACCAGTTCTTcggttaccatctttaattacgt
CATATTTAGAAATCCCGGGgaaaaaaggcggtattgactTAGACGCCCAA
AAAGGGCGTAAAGAGAGCTTTCGTTTGGTATGTCATGATGCTATGTTTAG
AGCAGCCATACGGAAATGAGGCCCTAGCAACGGATGCGATTTACCGTTGC
TAAGGAGAAAATTGTATACCAGGGCTCATAAGAAACCCTATATATCGGCA
GATATTTATGCTACGGCCTTGAAATTTTCAGGGTATGTTCAGGAAggata
aaggatactaaaaagccttaaatcccgaaattgataaatttttcaccaat
tttcaaaatctcatatgactacccccttaaaGTTTATGGGGTAAATTTTT
AGTCTTTTAGCAACCGTCCTACAAATACTGTTGGGGAAGTCTAATGAGTG
CATCACATGTTGAATTTTTTGAGAATAAAACTTGTGATTAAACTGCTTCA
AACATGTTAGAAGCTCTTGTATTACCCATGACATCAAAATTActttatta
acaagaaaactgGTACCATTGGAAAACCCTGCGTGACAGAGATGCACTTT
GTttacatgacatgacatgaggCCCCCATGCGGTTTTCATGATGACGTGA
TAGGAACTTTTTTGCAACGTGATTAAGTGATTGGAAATTATCTTTTcgtt
attgggcttttccagaaaaaaaccgtacacccTCTGTTGAGGAGCTCCAA
TCTTTTGTGAACCACCCCCTTTGAATTCCAgacaattttaggatcatacc
cctctagaattctgaatttttacagattttcaatcattacccctatggaa
aaccacttatttttggcggatttttgtctactgctatggaattccactgc
atttcaaaccatacccccttggaatggaaatggacctcctcaacaggggg
tgcacggttcttttctggaaaagcccattgcacAATGAGAGGTCAAAAca
tgatcgtgatttgaaaggttCTTAAGCCGTGATACGTAATTTGAACTTTG
TCAAAAGGAtacgtgatcagagttaccgctaGGGGGCCTCCTATAGTGAA
TATTATGTTACCTTAGCTGTCTTTTAAGGGTATTATTACCTGAATAATAT
GTTACTTTCGATATATTCCAGGTATCTTCCGCATCTTTCCTGGAAACATT
ATGGGAGTGAAAGAAGATGAACATAAAACGGATTTGTACGATTGTCGGCG
ACGTGTGTGGTATATCCAAGCAGCTGCTAGTGCAAAAGATATCGTCATTG
TCCTCGATCTTTCTGGTTCTATGATCGGAAATAATATTGGTAAGTATAAC
agacatttgaaaattgaagagGATGATATACTTTCtcttataccttatcg
gggaaaacttcgtcagggaaaattttcgtcggggaaaaatattcgtcact
tggccgaaatttcgtcacttttccccgacgaagttttccccgataccCTT
Atcgcgtaatgggtaatcaggaccactgtgcgctaatgacgacttactat
tggtccaaagttttgaaaaattttgaagatttttgcgtctagccaacggg
aGGCCATTAAAGAGGTGCAATCAGTCCttattacccatgatccatttcga
ctgtgaaatggcctataatACGGAGTGTTTCAAGTAAGTGAATTGCAATA
AATATGAGTGGTTCGTAAAACTAATTAAAAGGGGTTTTAGCCAATTTCGT
AGCCAGACCCACTcgcaccactttttgattttcctgtTGGACGTGATACA
ATCATTTTACAAACCTTTTGTGAACGCTATCATAATCATCAAAAAAGCGA
GCTAAGGGACTGCGACGAGTTTGGTTTTAAGCAAGTCTgcaaattttatt
tatattctaATTCTCAAATTCTTCTTCCAAGTTATgaaggaacaaaacaa
aatctgtttttctgtttttctgctTTTGGTTCGAGGAAAATGAGATTCTT
TTTCACTTTTATAAAGAATGATGAAGGCGTTCTTTATATGAACGGGTAGA
GGATCCGGTAAAATGTATAGTATAAATGCAGGCCCACGGGCTTTGATAAA
GCTTAAAGCTTTAGGTTATCCTTCTTTATAGCCTGTAACAAACTCTTCTT
TgctgactgaaaagataacgccaagtttttttaaatataaaaaacgcCCG
TGGGCAGGGTGGTACAGGCAATCTTCTTCATTGATTTCACCTTTTGTGTT
TCCAGGTATTGCAAAGATTGCTATCTCATCTTTGATTGACACATTACAAG
agaatgattattttaatgtcatCACCATCAACACTGAAGTCAAATACATT
GTCCCATGTATCAAATATTTGATCCAAGCCaccaaagaaaataaagaaat
gatgAAAAGGTACAAACAATTTCTTTCTAACTTCAACCTTGCTCAACCCC
ACTAGGTAAACTAAAACTTCGAAAAAATCCCCACTGGCATATACCTTATA
TAATAATCGCATCACCATCTTTGAGGCCTGTATATATCTCCGGGGAGCCA
CTCGAGGTAATAACCTACCGTACGTATTTTACTAAATAtcctctgcactg
taagggtccgatttcaaaggcatATTTTTGGTtgcacgtacggtcgtttt
taaATCAAGTGCCCCCGGGTGTATATCTAACACGATATTGAACACTGTTG
TTGATCAAGGTCCATCCAATGTGATGAGGGCGTCATAAATGTCTGTGAGT
TGACGTTGCTTTGATATTTCGCCGAAATTTTTACGGATGAATGAGGAGAT
TTACACTATGTACTTTATTTGCCACTTCATTCCATTCTTCTCCACTCCAT
TACTTTTCTCACATGTCTTGACTTAAAGGCGCTtaaaatcagaaatttga
caCCCCCCgtccatttttcttttcttccaaCAGGGTAGTACAAAATCTCA
CGGAGGCAGCCGAAATTGTGGATGTCAACAAAGGCATGGACGAAGCATTT
AAGATACTAAATATCGGTGAGTTCTGGACTTATACTAGGGATTtcttttg
cttatttttttacaGTATTCAAAATCTAATACAAGTTTTGGTAGCATATA
ACAAATTATTAGATCTATTTTCCACTATAGGAGAGCcagattttttaaac
aattaaaGTTAGCAGAGTAACAAtgaaattgatcatttttttaaacatta
tttcCTTGACCTCCAAAaatattggttcttcttacaagaaaagtGTTATA
TAATGTATATGCTGTGTgtatgaaatatataaataactaaCAACTCGAAC
AGATACGGGAAGAAGGACTTCATCGGAAGGAGTAAGGAAAACTAAATGAC
GCTCGGAATCAGAATACTGAGATATGTCGTACATTTTTCACATTGTAGGT
CCTTCAATCAATCGTACATCTGCTGGTTGCAACAAAGCCATCATGTTCGT
TACTGACGGGATAGAAGGAACTTACGCCGGACAAGAATCATTCGAGAAAA
ACAACCCAAATAAAGATGTACGGGTATTCTCATACCTTGTCGGCCGAATC
AAAAACCCGAACGAGAAAGCACTGAAAAAGATGTCGTGTGAAAATAATgg
ttttttctataaaatcgaAACATTAGGAAATATATGGGATACCGTTCTGG
ATTATATTCGGGTTATGAGTCGCCCGTTAATCCCGAATTTAAAAGACAGT
GGTCGGAAAGAACTCAAGCCAACATATACACCAGCATACCTGGATAGTGC
TGGTTTTGGCATGGTTATGACAATCTCTTTAAgcgttttcaagaaaataa
gtTATATTCATAATGAAGACCCAAATGACGTCAGATATTTGTATGAAGGT
TTCTTAGGTGTAGCTGGTACAGACATATCTTTGAAGAATTTGAAGGACCA
AGTTGATCAATCCAAACTTGGTGTTTTTAGTCGTGGTTTTGTTATCAATA
AcaatggttttgttttgattcatcCGAAATTCCGTGACCAGTCTGGCTAT
CTTCCTGTTCCCCCAAATGTCCTTATCGATGAGTTAGAATCAGCTCAGGA
TCAAGAAGATACGAGTGCACTAAAGAAGCAAATGTTGAAATTAACGGCTG
ATGACCTTGAAGGTGGTCCTGTCGAATTCATTACCCGGTCAACTTATGAT
GATGGTCGAAAAGTGTATTCAGGCAAAACAAAATATTGGTATAAATTGCT
TCCTGATGCTGATTTGGTTTCCGCCCTTGCATTGGATGAGATTGATAATA
CTTACTTAGCTGTTGATGAATCGACACTCGAATTAAAGGCGATCAAGGAA
AAAGGTATCAAACATTTTAATCCATATCTGAGAGTGTGAGAACTCAATCT
TGAAActataaattttttgaggcCATAATACCATCTGCTAACTTCTGTTA
CAATTTGAcattaaaacttttttcacatgcacgtaaaatctTCCTTAAGA
CCTTACGGAGAATCGTTCGTAAGACTGTCTTTTGGGAAATTCCCCGATAT
TACGTagagtttttattgataaagAGGGTCTTACttgacttttccttccg
ttcaaaacaATACGTAAGCTTGGGTAAATTTCCTATTCCTGAAGGTGTTA
AGTAAAATAATAAAAGGTGATAAAAGGAAGAGATGCGGTAAATTCTCGCT
CATTCCGATTTCTATCATTCtaatatttctataattcgaacttgtttcaa
GTCAAGAAGAAGCTCTCTTAAAAAACTTTCTAtagttcgaatctctctgt
tattcgaactgACACGATTCCCGCGTTTGAGTTTGACTTAACGAAATTCA
ACAGAATACAAATTGCTTTTAATACCAAATTCTTTCTTTTCTACAGGAAT
CGAAGCCTTAAAGCCACCAGTCGATGACTTTGACTATGATTATTGGAATT
TGACAAAAACCAACACGTCATTTGTTACAATTGCACCATGGAATTATTGC
AACTTACCCGAATCATTACATAATAAACCACTTGGTATGAAATTCTACCC
AACGGTTGGCGAGATCTACACATTCATGAGTAAAAATCCAACTGATTATG
AAAAGCATTGTAAAGATAAAGAGTTGGTAACTCGGCTTTTAGCAATGGCT
GGTGTAACGAGTGAAACTGTGGATAAAATTTGGAGTCAATTCCAGTTTGA
TGAAGACCCTGATATGATTCAAGGAGCTTTCTTTGCAACCTCCAGTGgat
atcaaaaatatttgtctTACCATAATCACACAGATCCTTCACCGCCCTTC
AATCGTGATATTTTACGGACCAAAGTATTTGAGACTCCAATCACAAACCC
GGATATTAATCTCTTTTTATCATCGTCAGCGCGTGACAAGACTGTAGGAC
CAGTAAAGATCTCAATCATGCATCCTTTTTGGAAGCAAAAGAACATTGCA
GCAGGTaatattctttttttgattctttttcttcCACCAAAGATCAAAAC
GcacagctggcacacaacattgtacCAACGTCAATCCAACGTTCATAAGA
CATCCAGACGAGCCTGGATGAGCGTTGACTTAACGTTACGTTGGCATGAT
ACCTcctctcacagacccggtggaaagAGTTGCTAAAATTCCGTCCAcag
tgaaaaattatactctaatttttgtcccctcttagaataatcaaataaac
aaatccccactgcaaaatattttgcgattttttcaTCCCCTTTGAATTTT
CTAACCTAAAAACAATGGCTGTAAAAAGTCTACCGGGTCTGTAAGGGGGT
GTAAAATGTATCGCCAATAGAAgataaatttagaaatttgttttcaTGGT
AGAAAggaaggaagaaaatttggcacAGACCTTCAAACATAGGAAGCGGA
GTTTGTAGTCGACTTTGTAGAGACTTTattcctaaaaataaaacatttct
atgattttaaaattttttgcaatttttttattttagtaaccGGTATTGAA
ATCAACAGTCAACTCATTTACAATTACTTAATGGaatcggcagaaataaa
aatgaCTGAATTCAGTACATTAGCTATCTGTAAAGATACTGAGAACGCTT
TTTGTGGTGTCATTGACGAACATGGATACATCATCACTAGCAACCAAGGA
GAGGCTTACACAGGACAATTTATCGGGGAACGCTTAGGAGAAATAGTCGA
TGCTCTACCGTTCTTTACCAAAATTGAGCTTGAAGATGCACAAGCAGAGT
GTCCGCTATCAGACGAAGTTTCCGCCGCAAATATTTTGCTGACGCCTGCA
AAATTAATTTTCGGTTTTATTACCGGGCTTTGTAAAACATGTTATTGGTT
GGTTATTCAATTTggtattgttttgatttcattgtTTGAGCATGCGCAAA
GAGTTTATGCGGAAGTACCAAAAACAATACGGGTAAGTTGTACCAAAACA
ATGCCGTTTTACCAATTCGATATGAGTAAaatccagaatggaaaaatatt
cCAGGAAACGTATAAATGTGAAGATTGTTCGGATAAAACAAAGGACTTTA
AATTAATTCGAATCAATGATACTAATACAATGCTATTGATGGCTGAAGCA
GACTCTAATTGTTGTTATAAGAAGCGAGTTAGTATGAATCACGTTAAAAA
AGACTCGACCATTGATTGGTGTAATCCGCCCGAGCAACCGTACAGGCGGT
CGCCCGCTGTTTGTTTGAACGATACGACTTCAAAACCGGAGAATGCTAAA
TGTGGCTCTGGATTTGTtgaaaaaccatcaattttGGTTTTAACGATAGC
TTTTATGTTAGTGTGTTTCGTTTTTGGATAAACCAAAGTTAAGCATCCAT
GTGCATAGTTATTGAGAAAAATatggaatatttttataaatgtggAATTT
CGCTGACTTCTGGCTTAGTCAGTAGTAACTCAATCACTGCAAACGTTTTT
GTTGAGAAAATGGCTTTAATTATAAGGAACTTTTGAAATAATGATGAAGT
ATCTTAAAATTTGCGGAAAAATTTGCGTTATAAATGATATATTACATTTC
CGTAAAAAATGTTTCCGTACGTTTCTAAAAGATGGCAAAATAATCTGAGT
AAAATAACAGAGTTGTGGAGTTACACATTTCAAAGCTTGGGCAAAAACAC
ATCCATCGCATATCAAGAGGATTTTCTTGGttatttttgagttattttac
CTTAAAAGACACTAGTTTCTAGCAATGAGGAATGAAATTTTGGGCAACTA
CAATTATAATTTCCTTAAAGcaatatccaaaaattttcaaatttacaatA
TAAGAATGTACTCTATAAGAATAATCAAAATGAAATCAGATATATTTCAA
ATTTAGGTCCAATTTGGATCCTTATCTAAGTAAGAATACCTGAAGAATAT
TTAAGGATAATTTTTCCCaaaagagttaaaaatttcaataatgaAATGGA
GAAAGAtcattcttatgaaaaagcgtgtatgtgcAAAATGGAATAACTAT
AGCGAAGGTGCCTCATTGCatgaaacaaaggaaaaataTCAACCTATTTG
GACGTCCAAATAACGTCGTTTCTACGTTAcattaaatttctaaaaagaag
gataatttaaaaacaatgttGATCCCTTGAATGTGCTTTAAACAAATTAC
GGCTTATATTAATAGAAATAGTGTGATAAACCTGTAGTATTTAAGTTTTA
CCAAAGAAATAAGAACGAGGACAATTTTACTCTCAGAAGTGCGACAAAAG
AGCAGCTGagcctcatcaaaaatttactggttcttataaaaaagggtgtA
TAATACAAGGGCTTGCAAATGTCTGGTTTTCCTGTATAATTACGCACTGC
TGAGAAATCTTCATTCATACAATAGagctttatatatttttgtttacata
cttactatataattattttatattattgtatttaatttttttttttttga
agctatAAAAATTGATATTTACCCTAAGAGGTAGTTTCGATCCCAAGAAT
AGACCATTTTAACTTCTTCTAGGTGTGACAAAAAGCTTACCTAACTAAAA
ATTAACAACACCAAATTTTAACCCAGTACAGAGTTTTGAGTGAGGCCCGG
GTAAAATGAAATTATATTCTTTATCCGGTCGAAATTCGGAGATTGATTGT
TTCTGCCCCGATCAATACAGCAATGGTATTACGCGTTTTTTTGTAAGagc
atccaaaacttttgaagcccttagatgttcttaactttttggatttc

Coding sequence (CDS) from alignment at sc0000001:2303887..2314933+

>TCONS_00000119 ID=TCONS_00000119|Name=TCONS_00000119|organism=Clytia hemisphaerica|type=CDS|length=3345bp|location=Sequence derived from alignment at sc0000001:2303887..2314933+ (Clytia hemisphaerica)
ATGACTGATTTCAAATACCTTGGATTTATATTGTTAACAATCTTTATACT
ATGGTTGCCTTTTGGTCAAGCAAGCAATGAAGTATATAATTACCGTCAGC
TACGGGAATCTGACTTCCAAGGAATAGCTGATAAAATTCATACAAAAATC
CGTGATTATGCTAAAAAGACTTTACAAGCTGAGAAAATTGAAGAACAATT
GAAGAAATTGAATTACATTGTTAAAACTGTAGATGGTCAAACATTAGAAA
CGGATTTCTCAGCTGGTCTTGAATCGGTTTTTAAcggaaaacaaaaaatc
ttggaaaatATTAAACATAAGGCTGAAAAAGCTGAAATGGATTATAATTA
TGATCAAACATTTGACGAAGAGCATGCTTATTTTAATATGCGTGATATCA
AAACACAATACAATGAAAATCAATCTCTGGTAATTGTACCCAAATTTTCA
GATAATGTTCGTGTTAATTTCACGCATAGCTTTGTACAAGTACCGACGAA
CGTGTACGCGTACAAAAAGTCCGTTTTAGATCAGGTAACATGGGGAGCTG
AATTGGATGAAACATTTGAAGGCAATTTTAAGAACTCGAGTGGATCGCTG
TTGTATCAATACTTTGGAGATGCTTCTACAGGTATCTTCCGCATCTTTCC
TGGAAACATTATGGGAGTGAAAGAAGATGAACATAAAACGGATTTGTACG
ATTGTCGGCGACGTGTGTGGTATATCCAAGCAGCTGCTAGTGCAAAAGAT
ATCGTCATTGTCCTCGATCTTTCTGGTTCTATGATCGGAAATAATATTGG
TATTGCAAAGATTGCTATCTCATCTTTGATTGACACATTACAAGagaatg
attattttaatgtcatCACCATCAACACTGAAGTCAAATACATTGTCCCA
TGTATCAAATATTTGATCCAAGCCaccaaagaaaataaagaaatgatgAA
AAGGGTAGTACAAAATCTCACGGAGGCAGCCGAAATTGTGGATGTCAACA
AAGGCATGGACGAAGCATTTAAGATACTAAATATCGGTCCTTCAATCAAT
CGTACATCTGCTGGTTGCAACAAAGCCATCATGTTCGTTACTGACGGGAT
AGAAGGAACTTACGCCGGACAAGAATCATTCGAGAAAAACAACCCAAATA
AAGATGTACGGGTATTCTCATACCTTGTCGGCCGAATCAAAAACCCGAAC
GAGAAAGCACTGAAAAAGATGTCGTGTGAAAATAATggttttttctataa
aatcgaAACATTAGGAAATATATGGGATACCGTTCTGGATTATATTCGGG
TTATGAGTCGCCCGTTAATCCCGAATTTAAAAGACAGTGGTCGGAAAGAA
CTCAAGCCAACATATACACCAGCATACCTGGATAGTGCTGGTTTTGGCAT
GGTTATGACAATCTCTTTAAgcgttttcaagaaaataagtTATATTCATA
ATGAAGACCCAAATGACGTCAGATATTTGTATGAAGGTTTCTTAGGTGTA
GCTGGTACAGACATATCTTTGAAGAATTTGAAGGACCAAGTTGATCAATC
CAAACTTGGTGTTTTTAGTCGTGGTTTTGTTATCAATAAcaatggttttg
ttttgattcatcCGAAATTCCGTGACCAGTCTGGCTATCTTCCTGTTCCC
CCAAATGTCCTTATCGATGAGTTAGAATCAGCTCAGGATCAAGAAGATAC
GAGTGCACTAAAGAAGCAAATGTTGAAATTAACGGCTGATGACCTTGAAG
GTGGTCCTGTCGAATTCATTACCCGGTCAACTTATGATGATGGTCGAAAA
GTGTATTCAGGCAAAACAAAATATTGGTATAAATTGCTTCCTGATGCTGA
TTTGGTTTCCGCCCTTGCATTGGATGAGATTGATAATACTTACTTAGCTG
TTGATGAATCGACACTCGAATTAAAGGCGATCAAGGAAAAAGGAATCGAA
GCCTTAAAGCCACCAGTCGATGACTTTGACTATGATTATTGGAATTTGAC
AAAAACCAACACGTCATTTGTTACAATTGCACCATGGAATTATTGCAACT
TACCCGAATCATTACATAATAAACCACTTGGTATGAAATTCTACCCAACG
GTTGGCGAGATCTACACATTCATGAGTAAAAATCCAACTGATTATGAAAA
GCATTGTAAAGATAAAGAGTTGGTAACTCGGCTTTTAGCAATGGCTGGTG
TAACGAGTGAAACTGTGGATAAAATTTGGAGTCAATTCCAGTTTGATGAA
GACCCTGATATGATTCAAGGAGCTTTCTTTGCAACCTCCAGTGgatatca
aaaatatttgtctTACCATAATCACACAGATCCTTCACCGCCCTTCAATC
GTGATATTTTACGGACCAAAGTATTTGAGACTCCAATCACAAACCCGGAT
ATTAATCTCTTTTTATCATCGTCAGCGCGTGACAAGACTGTAGGACCAGT
AAAGATCTCAATCATGCATCCTTTTTGGAAGCAAAAGAACATTGCAGCAG
taaccGGTATTGAAATCAACAGTCAACTCATTTACAATTACTTAATGGaa
tcggcagaaataaaaatgaCTGAATTCAGTACATTAGCTATCTGTAAAGA
TACTGAGAACGCTTTTTGTGGTGTCATTGACGAACATGGATACATCATCA
CTAGCAACCAAGGAGAGGCTTACACAGGACAATTTATCGGGGAACGCTTA
GGAGAAATAGTCGATGCTCTACCGTTCTTTACCAAAATTGAGCTTGAAGA
TGCACAAGCAGAGTGTCCGCTATCAGACGAAGTTTCCGCCGCAAATATTT
TGCTGACGCCTGCAAAATTAATTTTCGGTTTTATTACCGGGCTTTGTAAA
ACATGTTATTGGTTGGTTATTCAATTTggtattgttttgatttcattgtT
TGAGCATGCGCAAAGAGTTTATGCGGAAGTACCAAAAACAATACGGGTAA
GTTGTACCAAAACAATGCCGTTTTACCAATTCGATATGAGTAAaatccag
aatggaaaaatattcCAGGAAACGTATAAATGTGAAGATTGTTCGGATAA
AACAAAGGACTTTAAATTAATTCGAATCAATGATACTAATACAATGCTAT
TGATGGCTGAAGCAGACTCTAATTGTTGTTATAAGAAGCGAGTTAGTATG
AATCACGTTAAAAAAGACTCGACCATTGATTGGTGTAATCCGCCCGAGCA
ACCGTACAGGCGGTCGCCCGCTGTTTGTTTGAACGATACGACTTCAAAAC
CGGAGAATGCTAAATGTGGCTCTGGATTTGTtgaaaaaccatcaattttG
GTTTTAACGATAGCTTTTATGTTAGTGTGTTTCGTTTTTGGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000065XLOC_000065Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000119-proteinTCONS_00000119-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000119-exon-sc0000001-1491911889:2303887..2304672TCONS_00000119-exon-sc0000001-1491911889:2303887..2304672Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2303887..2304672TCONS_00000119-exon-sc0000001-1510915933:2303887..2304672Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2303887..2304672TCONS_00000119-exon-sc0000001-1575043694:2303887..2304672Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2307908..2308075TCONS_00000119-exon-sc0000001-1491911889:2307908..2308075Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2307908..2308075TCONS_00000119-exon-sc0000001-1510915933:2307908..2308075Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2307908..2308075TCONS_00000119-exon-sc0000001-1575043694:2307908..2308075Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2308992..2309145TCONS_00000119-exon-sc0000001-1491911889:2308992..2309145Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2308992..2309145TCONS_00000119-exon-sc0000001-1510915933:2308992..2309145Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2308992..2309145TCONS_00000119-exon-sc0000001-1575043694:2308992..2309145Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2309670..2309752TCONS_00000119-exon-sc0000001-1491911889:2309670..2309752Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2309670..2309752TCONS_00000119-exon-sc0000001-1510915933:2309670..2309752Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2309670..2309752TCONS_00000119-exon-sc0000001-1575043694:2309670..2309752Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2310135..2311040TCONS_00000119-exon-sc0000001-1491911889:2310135..2311040Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2310135..2311040TCONS_00000119-exon-sc0000001-1510915933:2310135..2311040Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2310135..2311040TCONS_00000119-exon-sc0000001-1575043694:2310135..2311040Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2311583..2312140TCONS_00000119-exon-sc0000001-1491911889:2311583..2312140Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2311583..2312140TCONS_00000119-exon-sc0000001-1510915933:2311583..2312140Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2311583..2312140TCONS_00000119-exon-sc0000001-1575043694:2311583..2312140Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1491911889:2312673..2314933TCONS_00000119-exon-sc0000001-1491911889:2312673..2314933Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1510915933:2312673..2314933TCONS_00000119-exon-sc0000001-1510915933:2312673..2314933Clytia hemisphaericaexon
TCONS_00000119-exon-sc0000001-1575043694:2312673..2314933TCONS_00000119-exon-sc0000001-1575043694:2312673..2314933Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2303887..2314933 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.74355	2.3373	0.512042	0.42581	10.1745	6.81116	14.4192	15.2227	6.83419	9.18904	7.10169	5.41631	20.0611	15.8725	0.915896	1.1115	7.20285	5.59646	19.2935	22.4027	9.36434	9.42666	6.93956	8.24186	8.89354	11.4617	2.13935	1.93022	2.31731	2.64224
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR013680VDCC_a2/dsu
IPR013608VWA_N
Blast
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BLAST of TCONS_00000119 vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 3.321e-82
Identity = 280/985 (28.43%), Postives = 453/985 (45.99%), Query Frame = 3 
Query:  252 QLRESDFQGIADKIHTKIRDYAKKTLQAEKIEEQLKKLNYIVKTVDGQTLETDFSAGLESVFNGKQKILENIKHKAEKAEMDYNYDQTFDEEHAYFNM-----RDIKTQYNE-NQSLVIVPK-FSDNVRVNFTHSFVQVPTNVYAYKKSVLDQVTWGAELDETFEGNFKNSSGSLLYQYFGDASTGIFRIFPGNIMGVKEDEHKTDLYDCRRRVWYIQAAASAKDIVIVLDLSGSMXXXXXXXXXXXXXXLIDTLQENDYFNVITINTEVKYIVPCIK-YLIQATKENKEMMKRVVQNLTEAAEIVDVNKGMDEAFKILNIGPSINRTSAG--CNKAIMFVTDGIEGTYAGQESFEKNN-PNKDVRVFSYLVGRIKNPNEKALKKMSCENNGFFYKIETLGNIWDTVLDYIRVMSRPLIPNLKDSGRKELKPTYTPAYLDSA-----------GFGMVMTISLSVFKKISYIHNEDPNDVRYLYEG-FLGVAGTDISLKNLKDQVDQSKLGVFSRGFVINNNGFVLIHPKFR--DQSGYLPVPPNVLIDELESAQDQEDTSALKKQMLKLTADDLEGGPVEFITRSTYDDGRKVYSGKTKYWYKLLPDADLVSALALDEIDNTYLAVDESTLELKAIKEKGIEALKPPVDDFDYDYWNLTKTNTSFVTIA-PWNYCNL---PESLHNKPL-GMKFYPTVGEIYTFMSKNPTDYEKHCKDKELVTRLLAMAGVTSETVDKIWSQFQFDEDPDMIQG---AFFATSSGYQKYLSYHNHTDPSPPFNRDILRTKVFETPITNPDINLFLSSSARDK----------TVGPV--------KISIMHPFWKQKNIAAVTGIEINSQLIYNYLMESAEIKMTEFSTLAICKDTENAFCGVIDEHGYIITSNQGEAYTGQFIGERLGEIVDAL---PFFTKIELEDAQAECPLSDEVS-AANILLTPAKLIFGFITGLCKTCYWLVIQFGIV 3041
            +L  S F G    I  K   Y+   L  +K +E  K +   ++ +DG  L    +  +E +F+ K + +  +   AE+A + + +D   D ++ YFN      RD    + E  +  ++ P    +N+ VN + S VQVPTN+Y    ++++ V W   L++ F  NF +   SL++QYFG A  G FR +PG  +  + DE+    +DCR R WYIQAA S KD+VI++D+SGSM G  + IAK  +SS++DTL ++D+FN+I  N E+ Y+ PC+   L+QA + NKE  +  +  L  A  I  ++  ++EAF IL+     N T  G  C++AIM +TDG   TY     F K N P++ VR+F+YL+GR +      LK M+C N GFF +I TL ++ + V++Y+ V+SRP + +      +E    +T AY+DS            G  ++ T+++ VF K         N+ R   +G  LGV GTD+ +K L   + + KLG+    F I NNG++L HP+ R   + G     PN    +L   + ++    L+  M+     + + G      + T D G++V      Y+Y  +        +AL      Y      T+      E+G+  L+ P                  V++A  W+YCN    PE  H   L  +K Y           K P      C DKEL+  +L  A V S  ++  W+    ++  +  +G   AF  T +G  +   +      +   N+D L+    E         L+   +A             + GPV          SI     ++  + A  GI++  +        ++    +     +I  D E   C +ID +G+I+ S +    TG F GE  G +++ L     F +I L D QA C  + E S  A+ LL P       +  +       +++F + 
Sbjct:   43 KLWASAFGGEIKSIAAK---YSGSQLLQKKYKEYEKDV--AIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDA--DLQYEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNF-DRDPSLIWQYFGSAK-GFFRQYPG--IKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLF-AKGIGMLDIALNEAFNILS---DFNHTGQGSICSQAIMLITDGAVDTY--DTIFAKYNWPDRKVRIFTYLIGR-EAAFADNLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVID------QEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSK--------QNETR--SKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWEDRDDVLRNAMV-----NRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTI------EEGLHDLEHPD-----------------VSLADEWSYCNTDLHPEHRHLSQLEAIKLY--------LKGKEPL---LQC-DKELIQEVLFDA-VVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLT---NQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVS-EDYTQTGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFLVEFNLC 948
The following BLAST results are available for this feature:
BLAST of TCONS_00000119 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D33.321e-8228.43Voltage-dependent calcium channel subunit alpha-2/... [more]
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