TCONS_00000153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000153
Unique NameTCONS_00000153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1723

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000153 ID=TCONS_00000153|Name=TCONS_00000153|organism=Clytia hemisphaerica|type=transcript|length=1723bp
GTATTTTGATTACCTCTTTTCCTCCctgtaaaatattgaaattaatgAAT
TGATTGAATATCTCTGTAATTTTGTGTAAATAAGCTTTTCAgggattttc
aaaatatttttgcacaCGGATCATGAGAAAATTACACCAATGAGCTTTTG
TTTTGAACACGAGTGCAAAATCTTGACTATTCTCTTGTTCCTTCCTCATT
TACTGCAAGTCTAGGTCTTGTAAACAACATACATCGACACACCTCCAAGA
AGCAAAATGTCTGACACAACTGGAAAGGTTATTAAATGCAGAGCTACTGT
AGCATGGGGTGCAAAAGAACCTCTAAAGATGGAAACCATCGAAGTTGACC
CACCAAAAGCTGGTGAAGTACGTATGAAAGTTTTACACACTGGTGTTTGC
CATACAGATGCTTATACATTAAGCGGTGCTGATCCAGAAGGGGCTTTCCC
AGTTGTACTTGGACATGAAGGAGGTGGTATTGTAGAAAGTATCGGAGAAG
GAGTCACATCAGTAAAACCAGGGGACCATGTCATTCCATTATACATTCCG
CAATGTTACAATTGTAAATTCTGTTTCTCCAACAAGACAAACCTCTGCAG
TAAAGTAAGagCAACACAAGGAAAAGGCCTTATGCCAGATGGTACAGTTA
GATTTCATTGTAATGGCAAAGATTTATTCCATTTCATGGGTTGCAGTACA
TTTACAGAATACACAGTGGTAGCAGAAATTTCTATCGCTAAGGTCGATGA
GAAAGCACCATTAgataaagtttgtttactcggaTGTGGTATCACCACTG
GTTATGGCGCCGCTCTTAACACTGCTAAGGTTGAGAAAGGCTCCAATGTT
GCAGTATGGGGTATGGGAGCTGTTGGATTAGCTGTCCTAATGGGTTGTAA
AAAAGCTGGAGCTGAACGTATCATTGCTGTTGATATCAACCcaacgaaag
aaaaaattgCACGAGAATTTGGTGCCACTGAATTTTTCAACCCTAAAGAC
CATGACAGGCCAACTCAACAGGTTTTGGTGGAGATGACAGACGGTGGTTT
AGATTACACTTTCGAATGTGTCGGTAACATTCACACCATGAGAGCAGCTT
TGGAGGCTTGCCACAAAGGATGGGGTGAATCCATCATCATCGGTGTGGCT
GCATCAGGACAGGAGATTAGCACCAGACCATTCCAATTGGTCACTGGCCG
TGTATGGAAAGGATCTGCTTTCGGAGGATACAAGAGTCGTGACAGCGTAC
CAAAACTCGTCCAAGATTACATGAACGGAGATATGAAGATTGACGAGTTC
ATCACACATCATTTCCCATTGAAAGAAGTCAACGATGCTTTCCATGCCAT
GCACGAAGGAAAAGCcattCGGGCCATtgttaatttgtaaaaatattgga
TGGATATCAGAGGTTGGTTGATAACTTGGTGGTTGTAAATGAAATGGTCA
TATTTGGCGATCTGACCATGtcagtgaaaatatttttaaattcggTTATg
attttgtaatgattttttttaaaccttaCCACATCTCGGTTGCCGTTTgc
ttgtttatgtttttttaagCTAATGTAGATTATGGGAGTATGGTTATTTG
CTCTggaaaatatatgattttgaaaaaatattgaaactctTTGGTTTTGT
ATGTGTATTTCAGAGGACCATAGTTCGCTTTCAGTTCACCTCgcttgatc
tcgcgctccgaaaacaattagaA
Run BLAST on NCBI

protein sequence of Alcool deshydrogenase

>TCONS_00000153-protein ID=TCONS_00000153-protein|Name=Alcool deshydrogenase|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MSDTTGKVIKCRATVAWGAKEPLKMETIEVDPPKAGEVRMKVLHTGVCHT
DAYTLSGADPEGAFPVVLGHEGGGIVESIGEGVTSVKPGDHVIPLYIPQC
YNCKFCFSNKTNLCSKVRATQGKGLMPDGTVRFHCNGKDLFHFMGCSTFT
EYTVVAEISIAKVDEKAPLDKVCLLGCGITTGYGAALNTAKVEKGSNVAV
WGMGAVGLAVLMGCKKAGAERIIAVDINPTKEKIAREFGATEFFNPKDHD
RPTQQVLVEMTDGGLDYTFECVGNIHTMRAALEACHKGWGESIIIGVAAS
GQEISTRPFQLVTGRVWKGSAFGGYKSRDSVPKLVQDYMNGDMKIDEFIT
HHFPLKEVNDAFHAMHEGKAIRAIVNL
Run BLAST on NCBI

transcript from alignment at sc0000001:346302..354514-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000153 ID=TCONS_00000153|Name=TCONS_00000153|organism=Clytia hemisphaerica|type=transcript|length=8213bp|location=Sequence derived from alignment at sc0000001:346302..354514- (Clytia hemisphaerica)
GTATTTTGATTACCTCTTTTCCTCCCTGTAAAATATTGAAATTAATGAAT
TGATTGAATATCTCTGTAATTTTGTGTAAATAAGCTTTTCAGGGATTTTC
AAAATATTTTTGCACACGGATCATGAGAAAATTACACCAATGAGCTTTTG
TTTTGAACACGAGTGCAAAATCTTGACTATTCTCTTGTTCCTTCCTCATT
TACTGCAAGTCTAGGTCTTGTAAACAACATACATCGACACACCTCCAAGA
AGCAAAATGTCTGACACAACTGGAAAGGTAAAGTCTTTTTCATTTAATCT
TCTTATTATGAATCTTTTTGTTCATTATACCTCCATCCTGTGTTATTCCT
TCCACTACACTGTGAAGTTTTTGGACAAGTAATTTCATTTATAAAACAAG
GTTACAAGTCTGAGAACTATTGATCCAAGCATTTAATTAGTATCGACTGG
TAAAGATTAGGCTTCCATAGTATTCCAAAATGCAAAAAAATAGCACTATT
CTAAAGGAATCAGAGTTAAGTTTGGAATACTTGACAAATTGGGATAAAAG
TAGACAGTTTTTTTCATTAAACAAGTCGTAACAAGTCTGCCTAGATAATA
TATTGTGTTTAAAAAAAATTACCTTTTTTACACTGTACTTTATGTCTGTT
ACCGGGAAGGGGTAGGTATCAAAATTTAGCAATCCAAGTCTACAAAAGTC
CACTGCGTTATGCCACCTCAGACTTTTCTGTAGACCAATTCAACAATACA
ATACTGAAATTGAATGATGCAAAATTTGAATTGCTACGTTATGGCTCAAA
TACAGAAATCAAAAATGAATCTCACTATACCTCACCATCAGGAGATAAAA
TTTAAGGAAAGGAATATGTTAAAGACCTGGCACTCATTTTCTACACTACT
TCAAACTTCTTTGCTGCAGATTAAATTGAAACAGGCTTTACTATTGATAC
TAGCTTATACTAGATGTCACCCGCGTTTTTTCTACGCAATTAAGGAATTA
ACGTCTATTCCACTTTGTGACATTTTCGAATGTTTGCCCAGGTTTTTCAG
GTTTTGGATTTTTTGAGGTCCCATCTAATTTTTGAAGCTCCTGCAGAAGT
GAAAAAATTGAATTAACGTCAAAGCAAGCTTCTATTTTTCCAAAATCTTC
AAAGTGGAACTCACTAAGAAACATAATGAAATATCCTGTTTTTTGGTGAG
GTGCTCGCTATGTTGATACAGTTTCTATTTCTATTTGGTTGAGTCACAGG
AGGCTTGGTCAATGACCAATACCACAGCGCCTCAGTTACGGTCAGTTGTC
AAGAAAGTTCTCTGAAACAATCAAATAAAAATATTTATGCTGCGAATGAA
AATATCCTTATTATTTGAGAGACGAACCAACCTGGCTGCCTAAAAAAATC
GTAAAGTTATCTCGCGAACATAGCACCAGTTTGTGAGAAATTCATTTGAC
TACATGTATCAGCATGTATTTTGATTTATTTTTGATTCAATACACTACCG
TAGAATCGTCTAATATCGACACGCGTCTTCTAAAGTCGACACCGGATCTG
TAAAATAATCAAAACAAACCTTGAATGAAATTCTTGGTATCATTCTTATC
AAACAAGTTCATCCATCAAACTAGAAGAAGTCCAATAAACATTGCAATCC
TTTCAATTAAAAAAACAGCCAAATTATAAGCAGTTTTACACAGCACACGA
AGCGCATGCAAACTTCCTCGTAACTTTCTCGTGTCCATCATTAAAATTTT
ACAACTTTATTACGCTTCAAGTCACGTGATAAAAATAATTTGCGCGCTTA
GCCTGGTTTCCCCTTCCTTATTTATCAAAAACACACGCTTTAGGCGCTAA
GAGGCTGCACGCCGTGATGGCCAGTATGGCGGTCACATTAAATTCAAAAG
GAAACCAGGTTCTTTTTATTTTTTTCGGTTAACGGTAAAAAGGTCTACTA
AAAAATTCCTTGCGTGCAAAATGTTGTTTTGATTTATTTGGATATCTTCG
TTCCGTTGAATGACAATGAAAGCATGCTAATTACAAATTAGTTTTTAGTG
ACTATATACATATCGTTAAAGTTCTTTTCGAAAAAAAACCACTTCACGTT
TCTTACATTTCAACAATCTGTGACGTGATAGGGAGAGTACAATTTAGTGA
TTGATTGATAACTTTGGTATGTATTTGTTTATGTTTGATTTTTTATTTCG
AAGACCAGCCTATAGCTATGTCGAAATAACAAGACGCATGTCGATATTAA
ACGACTCTACGGTATTGCATATGTTTTTTCTACATTTTTTTTACATTCTA
GGTTATTAAATGCAGAGCTACTGTAGCATGGGGTGCAAAAGAACCTCTAA
AGATGGAAACCATCGAAGTTGACCCACCAAAAGCTGGTGAAGTACGTATG
AAAGTTTTACACACTGGTGTTTGCCATACAGATGCTTATACATTAAGCGG
TGCTGATCCAGAAGGGGCTTTCCCAGTTGTACTTGGACATGAAGGAGGTG
GTATTGTAGAAAGTATCGGAGAAGGAGTCACATCAGTAAAACCAGGTATG
AATGATGTTATAAGATTTATGGGTGATATGCTGGGGTGATTGTGTTGGGA
AAGTTTTTAAATCCTGTCTCAAATTTGTGTTCATTTTGAAGCTTTGAAGT
TTGGTATTTTGAAGAAGAGTGAAAAATGAACTAAATCGATTCGTTATTAT
TAAGAATCACCCTAGGAATATTGAATGAAATACTGTTTGGAAATCACTAG
ATATATATTTGAAGATTTAAATAAAATTGCTATTGACTTGAACTCTTTAT
ATATTGAAGGTTTGGTGTATTATATTTATTCTTGATAAATAGAATAGTCA
AATTTCATCTGATTGTAAAACACTTCAGATTTTTTTATCAAAAGATCTGT
GTGCAAAATTGAGTTCAAATTACACTCGACATTGTGCAATGAAACAACTT
TGATAAACATTAAAATTGAATCATCATTTCTCATAATATGCCTCTAATTG
TTGCTTAAATTAATCCTGTTAAGGTTCTTATCTAGCATTATCATTTGAAA
TCAGGCATTTTTCATAGACAATTTAATTGTCTACATTAATTAAATATTAA
AAACAAAATAATTTATGTCACTGTTAAAATTGAAAATTCTAATTTCCCCT
TGCAACTGATAAGGCTAACATCTAGGTAATAGTCAAATTTATAAAGATTG
AGGTTTCTTTAGATATGCAAAATGATAAGGCTCAGATAAAGAGTTTCTTT
AAATACCATTATCAGCTAAATTTTTTAAACAAATATGCGCTCTGAAAAGT
TTCCACTAATTAAATAATTTTTGTTTACCTTTTTCAGGGGACCATGTCAT
TCCATTATACATTCCGCAATGTTACAATTGTAAATTCTGTTTCTCCAACA
AGACAAACCTCTGCAGTAAAGTAAGGTGAGTGCCTTTACATGAACAATGT
CTTTCTCAGGGGCCTGAGTTCTACTTTAAAAGAGCCTTGTATCGACCAAC
ACCAAAATCAGCAGAAGAAATTGCCTTAAATTTTAGAGTACACAAAGCAG
GCTCTTCAAGGTACCGGGTGTGCCACAAATAAGTTACCCTCTTTGAATTT
ATATTGCAGGCAGTAGAAAAGAGATTTTTCAAATATTGTTTCGGAATCAT
TCAGAGGAAAGCCTAACTTAAAATTTGGTTTATTACTTTTTAATTTTTCT
TTTTCTTTCGCCTTTTTCTGTCATTTTTTAAAATTGATACTGAGGTTTTT
GAACATAACCTTTGAACTAATGAAGCAAAATTAAAAGTAATACACCAAAT
TTTAAGTTAGGCTTTCCTCTGAATGATTCCAAAACAATCTTTGAAAAATC
TCTTTTCTACTGCCTCCACTATAAATCCAAAGAGGGTAACTTATTTGTGG
TACACCGGTATGAAAGAAACTCGAAGCATTTACTTTTTCTTGGAAGCTTT
AATAAAATACCAATTTTAAGTCATTAAAATGGCTTTTATATTATTGGGAA
GGAAACTGATTTGCTGTTTACCTGAATTTGCTGAGTCGTCACTAAATGGT
TTTGATATTTTTTAATTTAGAGCAACACAAGGAAAAGGCCTTATGCCAGA
TGGTACAGTTAGATTTCATTGTAATGGCAAAGATTTATTCCATTTCATGG
GTTGCAGTACATTTACAGAATACACAGTGGTAGCAGAAATTTCTATCGCT
AAGGTATATTGTGAATTTTATAGTAGTTCTTGGGTAATATGGGGACATAA
AAAACATGTTAGATTCTAAGGATGGCGATAAACCATCGTTGAGCAAAATT
GCACTTCTAACATAACTTTTGTTACCACTTTTAAGCTTAATTCTGTACGC
TAGTGGTTTTGCTCTTTGAAACAGCCTCTTATAGAGATGAGCAATCTCTT
ACTAACATATTCATTACAAACAAAGCTTTTCATCTACTTTTGTAAATAAT
TTTTCAGGTCGATGAGAAAGCACCATTAGATAAAGTTTGTTTACTCGGAT
GTGGTATCACCACTGGTTATGGCGCCGCTCTTAACACTGCTAAGGTATTA
TACTGAGATTTGTTGTGGATTGTAGCACCTATTGAACTTAATTCCATCAA
CTTTTTAGGTTCCACGTTAATATTGTGTCTTTATTTACAAGTACTCACTG
ACAAACCCGATCCTTTTTCATTTGACTGCGTGAAAAGGGTTAATAATTAA
TGTACCGTTTTCGTAGGATATCACTTTAGGTTTTCAATCGCAGTGTGTGA
AATTTTGAAGAATAAAGCAAAGTTACTCATTAAGAATATTGATCCTTGCA
AAAGCAAAAACCGATATTTAGAAGTTCTATTTTCTGAGTGCACTAACACA
GAAAAGTCTGCAAAAATACACATTCTTTCTTCAATAGAAGTACGTTACGA
TATTCCAAATCATAATTCGGGGATCTTAATTTTGTGGATAAACTCGTAGA
TTTGAAAAACCATTTTAACCAACCAAATTTTATTAAACATGAAATTTCGA
GAAATCTGTTAACTGTACGCAGTTGTACGTAGTACATAAAACTTCTGCAA
TTAGTAAAAATATATCATACTAAAGTTTGAAAAAATCAATTTTTAACTCA
CTTAATCCAACTTACTTTAATACTACCATAGTCATTATAAAAAACCCCAG
TCTGGCAATGTATTGTTTTAGCTTTTTGTTCAATTTAGTTGCTATTTGCA
TAATTTGTGATCACGTTACCAAAATCTCCTATTGGGATTGGTCTATTTTC
TAATCACATGATCAAAAAGTTTGCAAATAAATCGATTTTGTTCACGTAAG
CACCATCTTTTAACAATGAAAAGAGACAAAAGCCTTCCAGACCAGTGCTT
TTATAATGACTATAATTCTACCATAGGTTGAGAAAGGCTCCAATGTTGCA
GTATGGGGTATGGGAGCTGTTGGATTAGCTGTCCTAATGGGTTGTAAAAA
AGCTGGAGCTGAACGTATCATTGCTGTTGATATCAACCCAACGAAAGAAA
AAATTGCACGAGAATTTGGTGCCACTGAATTTTTCAACCCTAAAGACCAT
GACAGGCCAACTCAACAGGTACACTTTCGATATTTACTTTTGAGGATAGG
ATTATATTACCTGTGAAATAAGAATTTCTAACTTAATTCTCTCAGAAGAT
TTGGGTGGTAGAGTAGCAGTTACATGTCTGGAAAGCTCTGAAAATTTCAC
GTCAGATTTATAACAAAAAAAGATCTTTGATAAAAATTCGAAACGAAGGG
TCTACATACCTTAAGGAATTTTCGAGTTATAAAGTAAAGTTTATAAGGGT
TATATATACAACTAAAAGGACCATAAAACTTGTTCCAATCAACGAGACAT
TCTTTCGAGTAATAGAGGTTCGAGTTAAAGAGACGCCATTTTATAAGATC
TTACCGCAATAATAACATAAAAATTTACTTCCTCTTCTTCAGTGTCTTCT
CCACTGTACAAGTTCTTACCACAACAAAAAGATAAAATTTCCCCGCCCTC
CCCTTTCAGGTTTTGGTGGAGATGACAGACGGTGGTTTAGATTACACTTT
CGAATGTGTCGGTAACATTCACACCATGAGAGCAGCTTTGGAGGCTTGCC
ACAAAGGATGGGGTGAATCCATCATCATCGGTGTGGCTGCATCAGGACAG
GAGATTAGCACCAGACCATTCCAATTGGTCACTGGCCGTGTATGGAAAGG
ATCTGCTTTCGGAGGTATGCGTCTTTTTTTCGTTTGCCTGGTTGGTGAAA
ATAATGTTTTGTCGAGCTTATCTTGTGTTCTTTTAGGTAGAAAATTATTC
TGTTACCAAAGAATTTTTCACCAAAGTACCAAAAACTTGCCTTTTTTAAT
GAACCTGTCCCTTTTGTAAAAATTTTGGTGGAAATTCAATATTCAATTCC
TCACAGGAAAAAATGTAAAGCGAATTACATTAACTTTTGGTGAATTCGCG
AAAAGCTGAAGTATTTCAACACATTTCAGCTTTACACTGTAAATGCAGTC
TGAAAATTACGATGTTTAAAATGCTTTTAATTTATTATCTTTCTGTGTTT
ACTGATATATCTTTTAGGGAAGATCAGATGGTTTGGTCTTCAAACATGTA
CATTCCTTCCATATTCCTGAGCAAAATTTCAAATCTTTTTTGTCTTTTCT
AAAGTCGAGATAATATGGCAACTTGAAATCTCTGGAATTGGGCTTTGCCT
CTCGGCTCTCACGTCAAATCTTATTGCTTTCTTGCTAAAACTCAAAAACT
CGAAAGATTTACTCGACTTTGAAATAAGAGTCGAGAAGATTTGGAGGTTT
CACTTAGAACCATTAAAATCTTATTTTTTTCATATTCACAGGATACAAGA
GTCGTGACAGCGTACCAAAACTCGTCCAAGATTACATGAACGGAGATATG
AAGATTGACGAGTTCATCACACATCATTTCCCATTGGAAGAAGTCAACGA
TGCTTTCCATGCCATGCACGAAGGAAAAGCGTGAGTNCACACATCATTTC
CCATTGAAAGAAGTCAACGATGCTTTCCATGCCATGCACGAAGGAAAAGC
GTGAGTTATTTTCTCATTTGCCAGTACTAAACTCTTCGTCGCTGGCGAAA
AATATAGGGCTTGGCCTAAGACATTTTCTCATTTTCTCTGAATTTCCTTT
TGAGGTGCTGGTTTTAGAGCTATTGGATATTTTTCATTTTCTTGAAATTC
TGTTGTGGTCAAATCCAAAGGGTTTGGCGCAATGAAGTGTAAGCCCGAAG
GACTAGAAGTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCA
AAGTTGCGCGGCCTTGAGCGGTTCTTACACAAATGACAGATTGAAACTAA
AATTTACCGCTAAATTTCGAAAAAAATATCAATCGTAAACAAAGGAATTG
CTAGATTCAATCTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAA
ATCAATGGTTTGGCGGGAAACATGCCATTTTCGACTAGACTTCAATCTTC
AGAAAGCTGTGGCCAAAATCTTACTGAAAGTTTTTCCAAATTTTTGTTCT
ACGACTAATTTATAGACGATTCGAAACGTAGCCAGAATCTATGACGGTTC
GGTAAAAACCCGCTATTATACGCTGAAAATTAATTTGATGGTTTTTATTT
TTTAGCATTCGGGCCATTGTTAATTTGTAAAAATATTGGATGGATATCAG
AGGTTGGTTGATAACTTGGTGGTTGTAAATGAAATGGTCATATTTGGCGA
TCTGACCATGTCAGTGAAAATATTTTTAAATTCGGTTATGATTTTGTAAT
GATTTTTTTTAAACCTTACCACATCTCGGTTGCCGTTTGCTTGTTTATGT
TTTTTTAAGCTAATGTAGATTATGGGAGTATGGTTATTTGCTCTGGAAAA
TATATGATTTTGAAAAAATATTGAAACTCTTTGGTTTTGTATGTGTATTT
CAGAGGACCATAGTTCGCTTTCAGTTCACCTCGCTTGATCTCGCGCTCCG
AAAACAATTAGAA

Coding sequence (CDS) from alignment at sc0000001:346302..354514-

>TCONS_00000153 ID=TCONS_00000153|Name=TCONS_00000153|organism=Clytia hemisphaerica|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000001:346302..354514- (Clytia hemisphaerica)
ATGTCTGACACAACTGGAAAGGTTATTAAATGCAGAGCTACTGTAGCATG
GGGTGCAAAAGAACCTCTAAAGATGGAAACCATCGAAGTTGACCCACCAA
AAGCTGGTGAAGTACGTATGAAAGTTTTACACACTGGTGTTTGCCATACA
GATGCTTATACATTAAGCGGTGCTGATCCAGAAGGGGCTTTCCCAGTTGT
ACTTGGACATGAAGGAGGTGGTATTGTAGAAAGTATCGGAGAAGGAGTCA
CATCAGTAAAACCAGGGGACCATGTCATTCCATTATACATTCCGCAATGT
TACAATTGTAAATTCTGTTTCTCCAACAAGACAAACCTCTGCAGTAAAGT
AAGAGCAACACAAGGAAAAGGCCTTATGCCAGATGGTACAGTTAGATTTC
ATTGTAATGGCAAAGATTTATTCCATTTCATGGGTTGCAGTACATTTACA
GAATACACAGTGGTAGCAGAAATTTCTATCGCTAAGGTCGATGAGAAAGC
ACCATTAGATAAAGTTTGTTTACTCGGATGTGGTATCACCACTGGTTATG
GCGCCGCTCTTAACACTGCTAAGGTTGAGAAAGGCTCCAATGTTGCAGTA
TGGGGTATGGGAGCTGTTGGATTAGCTGTCCTAATGGGTTGTAAAAAAGC
TGGAGCTGAACGTATCATTGCTGTTGATATCAACCCAACGAAAGAAAAAA
TTGCACGAGAATTTGGTGCCACTGAATTTTTCAACCCTAAAGACCATGAC
AGGCCAACTCAACAGGTTTTGGTGGAGATGACAGACGGTGGTTTAGATTA
CACTTTCGAATGTGTCGGTAACATTCACACCATGAGAGCAGCTTTGGAGG
CTTGCCACAAAGGATGGGGTGAATCCATCATCATCGGTGTGGCTGCATCA
GGACAGGAGATTAGCACCAGACCATTCCAATTGGTCACTGGCCGTGTATG
GAAAGGATCTGCTTTCGGAGGATACAAGAGTCGTGACAGCGTACCAAAAC
TCGTCCAAGATTACATGAACGGAGATATGAAGATTGACGAGTTCATCACA
CATCATTTCCCATTGAAAGAAGTCAACGATGCTTTCCATGCCATGCACGA
AGGAAAAGCCATTCGGGCCATTGTTAATTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000088XLOC_000088Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Alcool deshydrogenaseTCONS_00000153-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000153-exon-sc0000001-1575043694:354238..354514TCONS_00000153-exon-sc0000001-1575043694:354238..354514Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:351970..352213TCONS_00000153-exon-sc0000001-1575043694:351970..352213Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:351090..351177TCONS_00000153-exon-sc0000001-1575043694:351090..351177Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:350312..350444TCONS_00000153-exon-sc0000001-1575043694:350312..350444Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:349971..350057TCONS_00000153-exon-sc0000001-1575043694:349971..350057Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:348947..349138TCONS_00000153-exon-sc0000001-1575043694:348947..349138Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:348301..348505TCONS_00000153-exon-sc0000001-1575043694:348301..348505Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:347593..347673TCONS_00000153-exon-sc0000001-1575043694:347593..347673Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:347465..347522TCONS_00000153-exon-sc0000001-1575043694:347465..347522Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1575043694:346302..346659TCONS_00000153-exon-sc0000001-1575043694:346302..346659Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:354238..354514TCONS_00000153-exon-sc0000001-1510915933:354238..354514Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:351970..352213TCONS_00000153-exon-sc0000001-1510915933:351970..352213Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:351090..351177TCONS_00000153-exon-sc0000001-1510915933:351090..351177Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:350312..350444TCONS_00000153-exon-sc0000001-1510915933:350312..350444Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:349971..350057TCONS_00000153-exon-sc0000001-1510915933:349971..350057Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:348947..349138TCONS_00000153-exon-sc0000001-1510915933:348947..349138Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:348301..348505TCONS_00000153-exon-sc0000001-1510915933:348301..348505Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:347593..347673TCONS_00000153-exon-sc0000001-1510915933:347593..347673Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:347465..347522TCONS_00000153-exon-sc0000001-1510915933:347465..347522Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1510915933:346302..346659TCONS_00000153-exon-sc0000001-1510915933:346302..346659Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:354238..354514TCONS_00000153-exon-sc0000001-1491911889:354238..354514Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:351970..352213TCONS_00000153-exon-sc0000001-1491911889:351970..352213Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:351090..351177TCONS_00000153-exon-sc0000001-1491911889:351090..351177Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:350312..350444TCONS_00000153-exon-sc0000001-1491911889:350312..350444Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:349971..350057TCONS_00000153-exon-sc0000001-1491911889:349971..350057Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:348947..349138TCONS_00000153-exon-sc0000001-1491911889:348947..349138Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:348301..348505TCONS_00000153-exon-sc0000001-1491911889:348301..348505Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:347593..347673TCONS_00000153-exon-sc0000001-1491911889:347593..347673Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:347465..347522TCONS_00000153-exon-sc0000001-1491911889:347465..347522Clytia hemisphaericaexon
TCONS_00000153-exon-sc0000001-1491911889:346302..346659TCONS_00000153-exon-sc0000001-1491911889:346302..346659Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:346302..354514 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
613.866	594.743	1056.65	1136.18	68.8899	54.9372	219.699	226.51	313.423	286.907	282.422	358.466	559.959	642.439	334.951	256.97	111.192	203.776	300.435	240.503	128.833	236.829	373.382	385.663	275.291	263.362	286.163	469.797	233.17	258.153
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013149ADH_C
IPR014183ADH_3
IPR013154ADH_N
IPR002328ADH_Zn_CS
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006069ethanol oxidation
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0051903S-(hydroxymethyl)glutathione dehydrogenase activity
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006069 ethanol oxidation
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00000153 vs. Swiss-Prot (Human)
Match: ADHX (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 502.671 bits (1293), Expect = 2.702e-174
Identity = 257/371 (69.27%), Postives = 308/371 (83.02%), Query Frame = 2 
Query:  275 KVIKCRATVAWGAKEPLKMETIEVDPPKAGEVRMKVLHTGVCHTDAYTLSGADPEGAFPVVLXXXXXXXXXXXXXXXTSVKPGDHVIPLYIPQCYNCKFCFSNKTNLCSKVRATQGKGLMPDGTVRFHCNGKDLFHFMGCSTFTEYTVVAEISIAKVDEKAPLDKVCLLGCGITTGYGAALNTAKVEKGSNVAVWGMGAVGLAVLMGCKKAGAERIIAVDINPTKEKIAREFGATEFFNPKDHDRPTQQVLVEMTDGGLDYTFECVGNIHTMRAALEACHKGWGESIIIGVAASGQEISTRPFQLVTGRVWKGSAFGGYKSRDSVPKLVQDYMNGDMKIDEFITHHFPLKEVNDAFHAMHEGKAIRAIVNL 1387
            +VIKC+A VAW A +PL +E IEV PPKA EVR+K++ T VCHTDAYTLSGADPEG FPV+LGHEG GIVES+GEGVT +K GD VIPLYIPQC  CKFC + KTNLC K+R TQGKGLMPDGT RF C GK + H+MG STF+EYTVVA+IS+AK+D  APLDKVCLLGCGI+TGYGAA+NTAK+E GS  AV+G+G VGLAV+MGCK AGA RII VDIN  K   A+EFGATE  NP+D  +P Q+VL+EMTDGG+DY+FEC+GN+  MRAALEACHKGWG S+++GVAASG+EI+TRPFQLVTGR WKG+AFGG+KS +SVPKLV +YM+  +K+DEF+TH+    E+N AF  MH GK+IR +V +
Sbjct:    4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374
The following BLAST results are available for this feature:
BLAST of TCONS_00000153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADHX2.702e-17469.27Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
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