TCONS_00000725 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000725
Unique NameTCONS_00000725
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1763

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000725 ID=TCONS_00000725|Name=TCONS_00000725|organism=Clytia hemisphaerica|type=transcript|length=1763bp
TTcagctaaaaatgaaaatcaacttCATAAAAGTCAAGATCTAAGATGTT
ATGCTGCTTGACTTGAGAAAATCTGATTTGTTGTGACATACCATCTGGGA
ATGTCTAATTGTGTTTAATGGGAAATGCCCATACTAAGATACAAAAACCA
AAGCACAAGACAAGTAAAACATACAAGATTAGATGATGATGTAGATTTTG
AACAACACTTTGATTATGGCATCTTACTTGGCAAAGGTAGTTTTGGCACC
GTCAATGAGGCTATTAGAATCGATTCTGGAGAAAAATTTGCAGTCAAAGT
TATTAATAAGGAAAAGGCTGGGAGTGCTGCTGTAAAACTATTAGAAAGGG
AAGTTGCTATTATGAAAAAAGTTGATCATCCAAACATTATCTTCCTGGAG
GAGGTTCTAGAAACACAGACGaaAATGTATCTAGTAATGGAATTATGTTC
TCATGGAGGATTGGAAGAAATGCTCAatgaaaggaaatattttttggaac
AAGATGTGTTGGTAATCATGCAGCAACTTGCAGATGCCATCGCATACATC
CATGAAAATGACATCGTACATCGTGATTTGAAATTGGATAACATATTACT
GGCTGAACCCACAGATGAGCTACCTTTTAATGTTAAGCTGACAGATTTTG
GATTGTCATATACACGTGGTGGTTCGGGTAGTGATTACATGATGAACCAA
GTGGTGGGAACACCTATTTATATGGcgcCAGAAGTGATAACCAACTATGG
ATACAGTCAACAATGTGATATTTGGAGTCTTGGTGTCATACTTTTCAAAC
TGATTACTGGAAATCCACCATTCATGTCATTTTCCGAAGAAGATCTTTTC
GATTTGATAAAGAAAGGAGAACTCCAGTTTTCTCATGAAAATTGGAAGAA
TGTCTCACCCGCTGCTAAAGAATTGGTGGAGGGATTGATGAAAGTTGACC
CTGCTCATCGCTTAACTTCTAAAGAAATTGTCTCGCATCCTTGGATAAAG
GGCGAACAAGAAATGAACGGTACGAAAACAATTAATGTGTTGGAAATGAT
GAAGGAATATAATATCGAACAGAAAAAGctAGCAGAAGAGCAACAGTTAA
AAGAGCAGCAACTACTCCAACAACTAAACAATGCAAATGAACAAAATGCT
GACCCGACCGACAATGAACAAGGTCCTTTGACAGCCATCGCTGAATTGGA
AAGCTCGCAAGAAATTCAAAGGAAGAAATccaaagATATCAAGAAGACTG
GTTCAGCATCAACCCTTAGTGCGTCAGGCTCATCACATAGCAAGAAAGCT
AGTCTCTCATCTCCCGGCCCTTCGACATCAAACAACGGAGACAAAAAAGC
GAGACCGGTACCAAGTTATATGCAACCTACAAAAAGTTCTAGAGCTCCCA
AAAACCCAAATATCAAGGGTAAGAAGAAATAGCTAGAAGGAGATTTGTTT
AGGGCTTTGATATGCTATGGTTTGCGTTCACGCTTGTATGCCGATGTTCA
ACAGTTTTTTTCACGATCCCCTTGATCGAAAGAGTGCGCATGCaccaaaa
agtatattttagatatatagaaaaattaattaatataAAAACGAGTGTGT
ATAGAattgaattattatttttgtttttatttttttgactaTTGAACTTA
AATTAAACCATTTCTTGTTAGGtattgtttttccattttttctccatttt
gtatGAGTTTGTATATAGAAGTAtcagtttgagtaaagaaataGCTTGAA
TGACCCAAAAAAA
Run BLAST on NCBI

protein sequence of TCONS_00000725-protein

>TCONS_00000725-protein ID=TCONS_00000725-protein|Name=TCONS_00000725-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MPILRYKNQSTRQVKHTRLDDDVDFEQHFDYGILLGKGSFGTVNEAIRID
SGEKFAVKVINKEKAGSAAVKLLEREVAIMKKVDHPNIIFLEEVLETQTK
MYLVMELCSHGGLEEMLNERKYFLEQDVLVIMQQLADAIAYIHENDIVHR
DLKLDNILLAEPTDELPFNVKLTDFGLSYTRGGSGSDYMMNQVVGTPIYM
APEVITNYGYSQQCDIWSLGVILFKLITGNPPFMSFSEEDLFDLIKKGEL
QFSHENWKNVSPAAKELVEGLMKVDPAHRLTSKEIVSHPWIKGEQEMNGT
KTINVLEMMKEYNIEQKKLAEEQQLKEQQLLQQLNNANEQNADPTDNEQG
PLTAIAELESSQEIQRKKSKDIKKTGSASTLSASGSSHSKKASLSSPGPS
TSNNGDKKARPVPSYMQPTKSSRAPKNPNIKGKKK
Run BLAST on NCBI

transcript from alignment at sc0000005:945087..959262+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000725 ID=TCONS_00000725|Name=TCONS_00000725|organism=Clytia hemisphaerica|type=transcript|length=14176bp|location=Sequence derived from alignment at sc0000005:945087..959262+ (Clytia hemisphaerica)
TTcagctaaaaatgaaaatcaacttCATAAAAGTCAAGATCTAAGATGTT
ATGCTGCTTGACTTGAGAAAATCTGATTTGTTGTGACATACCATCTGGGA
ATGTCTAATTGTGTTTAATGGGAAATGCCCATACTAAGATACAAAAACCA
AAGCACAAGACAAGTAAAACATACAAGATTAGATGATGATGTAGATTTTG
AACAACACTTTGATTATGGCATCTTACTTGGCAAAGGTAGTTTTGGCACC
GTCAATGAGGCTATTAGAATCGATTCTGGAGAAAAATTTGCAGTCAAAGT
TATTAATAAGGAAAAGGTAATACTACAGAAATTTACTTGAACAAAAGCAT
CATTTAATATAGTGCAGGACAATCATATAATAAATATAtcataattttga
aattgaaaacaagTGTAGGATACATCTTTACATTAGGGTATTCACAGATA
TGGATGTACAAGTTGTATTAAATTTCAGGTGCTACACTTGCCACTGTTTT
TTAACCATCTAGACTTGTGGCACAGTgtaggaaaaaaaatcatagCTATT
CTAGTAAAtatttattgttattgttatatTGATAATATCAATTTATATGG
ATTTTAATTTTAGGCTGGGAGTGCTGCTGTAAAACTATTAGAAAGGGAAG
TTGCTATTATGAAAAAAGTTGATCATCCAAACATTATCTTCCTGGAGGAG
GTTCTAGAAACACAGACGGTAAGATAAAATTCTTTGACTTTATAGATGTG
AATGTACGAAAttttaatacaaaattttgaatccagCCAAGGCAAATGAC
TTGTAACAACTTGAAATAAGTACAGCTTACAGTAggacgaaattttggca
gggactttaatttggcggatttggtatAAAATTTACTAAATTTAAATCAT
CTTACCCCTCCTCCAAATTGTATGCTTTTGTCAGGACttgaaacaggttt
ttttcttATGTAGCATttattggccaaaatatccTTCATTCgccaaattt
ttaataattcaaggccaaatttgatttttcaagctaCTTTCCAAATTAAA
CCCATGCCAAagttaactttttttctgcCATCGGCCAAATTAAATTACCa
ccgaaaaatcttttttgaccatccgccaaatttcttcctttaaggtaagt
GACGATGGATGGATTAGATTCCAAAGCTTGTCAATAAATCAACTGATTCT
TCAACGAATCTTTTTATCCAAAAATTCACAttactttttttttcctttag
aaAATGTATCTAGTAATGGAATTATGTTCTCATGGAGGATTGGAAGAAAT
GCTCAatgaaaggaaatattttttggaacAAGTAGGTTTTCTAGGAATTt
cggttttttagttttttcactttcaattgAATTTAAATTGTCAAATATCA
ATATGTATTCATTCAAAAGTTAGaatttatctatttattttactgtataa
ttcttttttttccatTCAGGATGTGTTGGTAATCATGCAGCAACTTGCAG
ATGCCATCGCATACATCCATGAAAATGGTACGTTATTTTTAGTCAAATAC
TGTAGAACCAatcagaattttattttttattatattgtggTGGTTGTTAC
CATAGACTCTTTGAAATTCCTTTTATAAAAGAGGCTAACTCTGCTGGTTT
TTTAGCAACCTTTTGGTTTGAAGCTGTCCAACCTTTTTTAGGACATTCTA
CTTGAtacaatacactcttctcgagatgcataaatttattgttgtcctcg
ttgagacattttgaatttcaagtacttttgttttagagttaatgtttgcc
ttttgggaatttaaattggtttaattgtataatttcatagcaatgaaatc
tgttttgAATTACTACGTGTCTAAACCCCTGAAAGCTTCTTCCATCTTAA
TTCTTACTCACCATGCATTCAAGAATCCCAAAATAACAGTTCATTATCAG
ATATTGTTCTCATCATTTTTCCTTTATTTCAGACATCGTACATCGTGATT
TGAAATTGGATAACATATTACTGGCTGAACCCACAGATGAGCTACCTTTT
AATGTTAAGGTGTCTGTCTCCTTTAAATTCCTAATACAGTACTACCTTCT
TCATATATACATTTCAATTAAAGAGTTGAAGTACTAAACAACGACAATTG
ATAGACGGTTTTAATGTGTCATCNTATATACATTTCAATTAAAGAGTTGA
AGTACTAAACAACGACAATTGATACACGGTTTTAATGTGTCATCGCAAGC
AACTTTAAATACAAATAAAACGAACTTTCTTGAACGTTGAGTAACGCTAG
GACTAGAGAACTTTCTTGAACATTCAGTGGACACAAAGGATCGTTCGCGA
GCGTTTAGGAACGTCCTGAACATTCAGAAACGTTCTGGAACGTTTAGAAA
TGATCGAGAACGTTCTGGAACGTTCTAGGAACGCTATGGAAGTTCAGGAA
CGTCTCAAGAACGTTCCATTTAAtttgtacttcaaatcgcttgtggtaat
TGCACATCATGTTTCACGTCAATGAAATTCTCATATGTTTTTCTTACAGC
TGACAGATTTTGGATTGTCATATACACGTGGTGGTTCGGGTAGTGATTAC
ATGATGAACCAAGTGGTGGGAACACCTATTTATATGGGTATGATATTTTC
AGctctaatttcatttttttttgtcttttctcCTTAGCTTTTAGTTCCCA
ACGGAACTTCGTATCAGGGGCACACTACATGGCTTCTATATTAATTGTAT
GAgcatgaaaatatttcaaagcctTTGGAATTTCTCAAGATGATCTTAAG
TTATTTGTCCTCGAAGGCTaatgttttttatataatttgtatGTTTTTAC
AACACATGTAGAAATTTAGTTCATTCTGTTATAGTTCCTTACTTTGCTTA
GTTTAATAAACATATAGGCTTACAATAAGTTTTAATTTGAACCAGAGATA
TAGCTGCTTTGACGTGTGTCTACTCCTGTGTTCTtatatcattatttttc
tttttcagcgcCAGAAGTGATAACCAACTATGGATACAGTCAACAATGTG
ATATTTGGAGTCTTGGTGTCATACTTTTCAAACTGTAAgcttattcaaca
tttttaaaagcattttctCTGAATTCTTTATACCGCAGCTCGATATTCAA
ACTGCTGAGTTTGTTGGtgtctttctttattttcagtCCTCATTTCTCTT
GAAAGTATGACGCTGCTCAATAACTTTATCAGGAACATAACAAATGCCAT
TGCAAGCGGCATACAAAGGAAATCTAAAACTCTATATTAATAACTCTTTT
TTCTCAGGATTACTGGAAATCCACCATTCATGTCATTTTCCGAAGAAGAT
CTTTTCGATTTGATAAAGAAAGGAGAACTCCAGTTTTCTCATGAAAATTG
GAAGAATGTCTCACCCGCTGGTATcattaaaatacttttttatttttatc
ataattCTCCACTTTGCCTCCACTCTCCTTATCCCGTTGTTctgaaaata
atttataaattaCCAAATTACCAAATATCTTACATTTTAAGCTATTGACA
AGTATTCTAACATTAATTCAATGAATTATGGCACAAACTTATAATATTTC
TATAttaaatgtaattttttctgGGGACCTTTCTGACCATATAAAGGGGT
CATGTATCAAAATTTGGGAATGGCGTTATCTTCCGTATAACATTCTAAGT
ATCATGGGCTTTTTAGACCATAATTAAATTAATCACCAACTCCCGTAATT
GTTTTTGATGGTGTCAAGACAATGTCTCTGTGTAATGATTATTGCCCATA
ATGATATTGCacaattgaaattattttattttacatttttgtcGATAGCT
AAAGAATTGGTGGAGGGATTGATGAAAGTTGACCCTGCTCATCGCTTAAC
TTCTAAAGAAATTGTCTCGCATCCTTGGATAAAGGTAATGGTATATGATG
GCTCATAACACATTAAGTGTTTTATTATTTATCATAAAAAGGCCAAATAA
CAGCTAGAatctgtgttcgttcgttcgttcgttcgttcgttcgtctgtta
ccaacttttctcaggattgaatcataggaatcttttgatttttggtccAA
AGGTGCAAAagggtggtggccaaaatgtgacggagcccgattttcgaaaa
aaaattttcttaggcaaatttgggccaaaaaacggctaaaaaacgatAGA
tagagatagatgttttttttgctcatttagggcttacttttgataaatat
tagtgtttagacatgaaattttggctgattggcgtttttttatagaaaca
ctggccaaattcgatatttttttataagcacattatcaattacttaggta
ttgccttttttcgagattggctctttcatgctttatgaatttttgcacaa
agatacatAACTATaagccctcgaatgtgacggagcccgattttcgaaaa
aaaaatgtttttgggcaaattaggaccaaaaaacggctaaaaaacgggtt
ttttggactttgtgaaatattggatcattgtttttttctgattttttgca
tgaaagcaggtaaaagatgactcaagcagattcaaaaaacgcatctttat
ctataagaatcactattaataagatacatcaatgttcttagccaaattac
tcaatttttttgatgagatagatttttttttctcacgaagtcttgaatat
gaaagaatatttcaggagcatgaaattttggtttctaaacggttttttat
aagaaacaaacgactaattttgatagatcgtcactatttgtgttctgaat
gattgtttaatgatcacgtcacgtagatatcaattatatatgtgttaaat
acataaccaggtaggtccataaaagtatcacttgtttcggTCTGTTACGA
TTAGATTAATTTTGTCTCTCGGTACTAGCAACTATTTGGTCACCGAAAAA
CTGGTCCTTAGGAGTGTTGTTTTGTAAAATTAAAGATAATATCGCACTGT
GGTGGATGAAGTAGCTTCACTTAAGTTGAAGTAGTTCTCGCACTAAAAGT
AAAACATTAATCCATCACAGCGGCAATATAAGAGGCATTCGATAAATAGT
ATCAGACACGAAATGGTGTCTAACTTATTTAACGAACCGTACCTTTTGGT
TTATTTAATTTCCTGCAAAGAAGAGTTTGAGTTCTCTTCCTGCGAGGAAG
AATTTGGTAAAAGCTGATAGAAAAAGTGTATATTTTTTCTATAGGGCGAA
CAAGAAATGAACGGTACGAAAACAATTAATGTGTTGGAAATGATGAAGGA
ATATAATATCGAACAGAAAAAGGTATCAAATAAAAACGtctcaaaaaaaa
catcttaacCATTGATATAAAAGGAGGCTTTGCCGCCTCAAAAATTTGTG
GGATAATTAAGAGCACGAAAAGAGCACGAAAAGACTTTGATCCTGTTTGA
TTGCCACTGATCTTTGTCGTCTTGCGTCGtccttttttgaaatatttaca
aagtTCCTATTAAAAACAGAGACTTTTCGAAATTCGGGAAAATTATGCAA
AGTGTAAAACAAttcaagtttttatttctttagctAGCAGAAGAGCAACA
GTTAAAAGAGCAGCAACTACTCCAACAACTAAACAATGCAAATGAACAAA
ATGCTGACCCGACCGACAATGAACAAGGTCCTTTGACAGCCATCGCTGAA
TTGGTAACGTTTtgtcttctttatttttttttggtattatgatttttttt
aaaggatGCAGCGGGTTTCAATACAAATTTACAAGCTCATCGACTCATTA
TCATAACATACCTTTAGAGGAAAATTTGGCGGGAAAGATTTTGCCAAACG
CGGGCCAATACttggcggaatttatttttggtgatttacgattttttttt
taattaagcgAGAAAGAATTTTGGCAAACAGCACGttattttgttagttt
tttttagctgaaaaaaagaagaaataaaggtatttttttaagaaaaaatc
ttgtgCATATTAAAAGGtgattaaatttggcaaaagttattttcaaCGAT
TTAAGAAATTCGCATCTCGGCAAAATTTTATCTCGTCAAAACTTCTTTCC
ATTAGgtaattattttcttcttttaatcaAACTGAAATAACATGGCGTCT
CATCGCAGGGCTGTTCCATAATAACTTTTAATAATAACTTTTTCAAGTCT
TAGAATTTTCTTAAGTTAAGTAATACCTTATcgaccctttttacgccggc
cctaatttaacaccggcccttattacgccacagcctaattttgggcttac
gccaattagggccgttaataacgccaaaatttgaaaaatggctacttatg
cATCAAATTAGTAAATGATGACTAGAATTTACatataaaatgtcattttt
cagtagtaaactgttgaaaattccatagaaaatatattaaatatttcact
gaagttttaaatatggagtaaatcaatggataattttcgtcttcgaatca
taactaaaatcctttaaattgagaaataatgataaaaaattaacgcatta
atataataatataaacAGAATATAGTAGAGGCCAGAGGTGAGATTGGCAG
TTATAGATTAAACGCATATGAAAAGATTGTATCTTCACTAAGAAGCTATC
GATAATGACTCAATTTGGATAATTGGAGCTGAGTGGATGAAGAGCTGAAA
TATACCTTGGTGTCTAGACTTTAGATTCccttttaaaattgaataattat
aaataataaatcaaataatacacgttttttacaagaacattttgaagcct
tcagatattcttaacttttcgggtttcgagcctaaaattgttcttaacat
gtttttattttcagcatttttgagtatttttgtccattttcctaagaaaa
caggtgttttaaagcccaaaaagccttaaaatgttcttaacttgctctta
agattttggccaccgaagccttcatgttcttatacagtttgttcttatga
aaaataacGTGTATTGCTAATATGTAATAGACGGGTAATAAGAACGGTTG
ACAGACTATTCGTTATCATAGTATTGAGATTTTACTGCTGACTTTTTTGA
TTTTCGCATTTGATCTGAAAAACTGTGTGTCACTGTCTCGCAAGTTGGCA
GCTAGTATAAACTACAGCGTAAGATTCTAGCGAGACTAGTTTAAACTGCC
TGACAATTTGCGAGACAGTGACACAATGTTTTTCAGATCCAGTGTGATAA
TCCGGCGTGAATAACCTGGGGGGGGCAAGGGCAGCGTACCTTTACCTCAT
CCTTGATGTATTGTAGAATCTATACCTAGCACAGTGACCAATTTTCTGTC
TACCCACGACTCGCATGGTTGGCCCGGGTGAACGTACATGTACTTGCCAA
GTAAATCACAGCACCGAGTTGGAAACAAATTCCGACCTCCTGGACTGTGG
TTAAGATTGATACACTacactacactactgcgccaTCTCATAGTAGTGAG
ATATTAGGTGCATCAATGTTCGATCTAAATATGAGATTGATTCAGCTGAA
TTAAACCTGCTACAAGAGAAACAGCTTCAATACCTCTCCAAAACAGGTGT
AAATTGAAGAACTCTTCTTCGAATATTTCTTTTGCTTcggttattaggta
cccgagagtagagcTTAAATATTGTCATTGCACTACTACTATCGCTATAT
CTTCATCTTTACTCAAAGAATTCAGTTACGTCTTTATAATCTTTCtggac
aaaattttcaaataaagagaAATTTATTTCGACATTTGTTAGTGTATTTA
AATCTCCACTCCATTCCCAAGAAGACTTGAGCATGAAATCTCATTTCTAA
GTACTATGTTGGTTAAGGTAATCGATAGTGTTCCTTTTTTTCTTATGGAA
TTAATAAACCATGATTTCAGCAAGACCCATGTATCTTCGCGATCCAATAT
CAAGTTGTGACAACTTTACGTACCGTGCTAAAAGAGGCTTAGTGCATTGA
GCAAAATAAACCAAAGCAACAGTATCCCCAATATGTGTACAAAATCGTTG
ATTGTTGCCTGGACTATCGAAGACGTTGATATCAGTTTGTGATAGGCGCC
TTAATATATTCAAATCTTCTGTATGTCGGTTATGTAAAATTAAGAATGTG
ATAATTTTTCGTGAACCAAGATCGATTTGGATCCATTCATTTTTACTACT
GCCTGTGATACAGAATGAGGAGTCTGCGCCGAATTCGCCATCAGTACAAT
GCGAACCGTAGTTGGATGCATACGTCTTTGCCATCAGTACAGGTTTGTGG
ATTGCCatgttttctttcaataaagaGAAGAATAAAATATGTCACAATAA
AAATCTGCAGCAGAGACAATAACGACAGTACTTTTGATAGGATTCGAATT
AAATAGCCGTTTTAatgtttgttgaaaagatattcaacaGTGTAACATTA
TCCAATATAAAATAATCcagcaaaaatttggaaaatgacgatgaaaaatg
aggaaaaaaacTTCTTCTTAGTTTATCGACTCATCAATGGACAAGAGTAA
GGTTAAACCAAggtcaaattttcaacaaagaaattcattgttctttgatc
ttttttggtaaaagttttaaaatgttaatATTGAATTCCAAAAAGATTTC
CTTTGAGGTTTCGCTTAAGACCCTGGAATGAATCTGCAggcaaaagatta
aaaaaacataTGCTTCACAATGACCATTGTACAATACCTGTTAGCTCATT
CATGCAATGTTCATCGTAGGTTTGAAACGGACATAGACATTCATAAGTTT
CATTGTCATAATGTGGTATACATTTATGGTTTGGATTGATGCACGTCTCT
TCCCATTCACAATCATGCTATAAAAGCAATGAGAAGACTTTCATTTAGCG
GACATCATTATTTCAATATTAGAGTTAAAAAGAAGAACACGTCTTGCGTT
AAATTCCTATCAGAGGTTGAAGATAACcactttttacattttttgcatgc
CTCGTGCATACTTCTCAAGAAATGTAACttgaaaatttccatttcatcaa
tttttattttcaagcccccagtatataaaaatggGTATGAAATGTATGTG
TACTTCATGAATACTATActaccgggtgtttcaaaaaagtgtacaagttt
CAATTGAGATAGGAAGAAAACTAAGAAAGTTGTAATTTTCACAatcagaa
agaggaaaggcTGACTTAAATTTTTAGCTATCAAACTTTAAGTTTGCTTC
ACGTGTTCAAGAGTTataagaaaattcgaaaaaaaaaatttgagaaaaaa
gttagGATCAATTTTTATGTCTTTCTCTTTTGTACAAGAAAAGAGCGCCC
TATCGAATCTTCAGATGCTAAAACAAAGTATCAGAAAAgctttttttcac
tgttttttaagctttaattccagacggtgtcaatggAACAAGTTCGAACA
AAACTAGCGATCAAGccaatcgaatgtaatcgaatgcgctcgaataattg
caatttgattgtcgaatgcaatgaatctcaatcgaacggccgattcctgg
tcGATTactcgattgtgttcgattgtgttcgagttatgttcgattgagat
tcgattatgTTCAATTAGTTTAATTAGTTCGATTATGATAATGTTCGATA
AGATTGATTGCAATTAAATTAGCCCACTCCTCTAGAGCTTTAGAACTTAT
AGCGTGGGCGGCTACCAATATGCCATTGGAAAATCAGATAAGAGCAAGTG
CGCAGTACCACACAAGACGAGAGCGATTTATGCGAGCGAatataatcgaa
tacaatcgaattTAATCGAAGCAAACGAACGGCAAATCCGGAGTAATANC
GAatataatcgaatacaatcgaattTAATCGAGGCAAACGAACGGCAAAT
CCGGAGTAATAATATTTGATTACGATTCGATCGGCTACCAATATGCCATT
GGAAAATCAGATGAGAGCAAGTGCGCAGTACCACACAAGACGAGAGCGAT
TTATGCGAGCGAatataatcgaatacaatcgaattTAATCGAAGCAAACG
AACGGCAAATCCGGAGTAATAATATTTGATTACGATtcgattcgattgat
tcggcgttcgattcgttcaattgacaccgtctggttaaTTTGATcccttt
atttttctaaaatataacgcttttttttaattaaaaaatagctcaaaatt
taagttagcctttcctctttctgatgGTGTAAAGTCTAGATTTATAACAT
TCTTAGTTTTCTCACAACCTTGCTTCAAGCTTGTACACTATTTTTGTGAA
ACACCCGGTACctggaaaattttcctacccatTGAGACCCAGATAAATGT
ACCCAACGCTTCACTTTTAAACTACATTGTACATACTACCCAGAAAAGTG
CTAAATATGCCACATATCCCCTATTTTACTGAAAGGTACAACCcacaaaa
atcttaaatttgatTATACTGATGTTCCTTTGTTTGCGTCGCTTCAATAA
AATGTTAATATGAAAGTCTCGATCAACGACGTTGTTCTCTTTGTAATTTT
GAGCTTGAAATTTTTCATAGTCAAATAATCTCAAAAATTGTAATCTTTAT
GGTGTCCTaccaaattttgggaaaatacGTAGAAGTTCACCTTAAATATC
GAGTTGAACTGTAATTCCAAACAGATTAAAAGCGAAAAATCTTTGAATTA
ATAGGCAAATTCACTTTTAGACCCTAAACCCAAATTTTGTACACATATAG
TAAAAATCTAAATCGATTTCGGACCCTACACCACAAATTATAGTACACAG
TTCGTGAcaacttttttctcaaacacccacccaccccatgcCGCCACCAC
CTCtcgtacactgaccccccccccctggaaccGCTATATGTGTTATTGAA
ATTTATGATAAACTCACACTGATAGCATAATGTGTCGATCCAATTTGTTC
AACAAAACTTGTAGAATTTCTGAAACGGTCAGTGCCCAGTAGTTGACATT
CAAGGTGGCCAGCACTGGCTAGTGCGTTCTGTACTACAACATTGGTACTG
GTGCACGTGTCAAAATTGATACAATGTGCAATGCAATTCGAGTTTGATGT
TATGTTACTTGTAATAACTTGTATTGGTGTTACATCAAGGATGTGATTGA
CATGGGCCACCATATTTGCAAATCCATATTGTACTGAAATAAAACGCGGC
TCTTGAATTCACTTGAAATGAATATATAAATTTGGTATTGCGTAACCCGT
GCCTATTTATTATGAACTTACTTAATTCTTGCCTAAACTTAAGGGCAAGA
TAATATGAAATAATAACAATTTATACTGTCGATGTTTTGGCTCAGactaa
aaaatgattatggaTTGAAACCTTCGCAGGTAAAATTATTGTCAATagga
aaatcatttaaaatctaaaaagtcTTACCACTGCTATTTGTCTGCACCGT
ACTAAGCCTCTTAATTTGTTGACAACGACAACAGCTTGGCAGAATCACCA
ATGAAATACGTAAAAATATCCCGAAGAACAGATTCATACTCCTTATCTTC
ATTGATAACTCACCGTCGGCATAGGCTATTCTAACTGgtaaaataaaact
ttcttggtaaaatatatatttatataatttaagtAATAAATTTTAACCCC
ACTCACGTTAtgaacgagcacaaaatcgaaATCTTATTAAttctatataa
aaaaaacgtagaAATCGGAATCAATTGAACGCTTTGTTTGACAATACTTC
TATGGTTTGACTGCgaagtctttttttccaggGCAACATTATTCAAGTTG
GTCTTTTCTTTTTagttctttttaaattttttcgtccatttcttttattt
aaaattctgACGTTTGCGCTAACTTTTATCGTCTTGACAATTTTGAATTG
TACCTTATTGTTAGCCATAGCATTCAATAATGTCAAACGATTAAGATTGA
GGGGATGAATCGACTAATTTATTCAAGTTTCTCACAATCCTCTCTCTTCT
CCTAGAAAATCCTCAACAagataatatttttaacctgTGCACTGATCACC
GGTTGCATTTGAAACCCAACTGCGTATACCAGGGCACTGATACAGCGGAG
TTTTAAAAAGACATGACAAGCAAAAAAACTCTCTTATTTAAGTGTCTTGA
TCATAGTAATGNACAAGCAAAAAACTCTCTTATTTAAGTGTCTTGATCAT
AGTAATGATTTAAAATGAAAAGGGGGGGGTTCAcgtttggcggaggagcg
gaatcagcccttttttcggacggagtagcggaatttggcgaaaatttaga
cggaattacggaaattgggttctctgacggagacggaaaattagacaatt
ttagtgcagaaaaacggaatttagcaaaaaaatttgcggaatttcggaat
tggtgaaagatgttcaaaatttgcggaattttcgacaaaaatattaaatt
tcaaaagaattttcggtgacggaattttggttcaatttaagacggtttga
cggaaattggagaaaaaattgacggaattgctgaatcgggtaccccctga
aaccccccacCTGAAAATAGGAAGAAGAACTAAAATGCAGGAGCGATAAT
CTATGATAATCAACCCCACAACAATTGCCATAACATACATGACAATAACC
TCTAGCCAATGGACGGTAGTCTCTTCCGGACAAAATGACTCATAAAATTC
ATACTATGAAACATTTCTAGCAAAGCTAGGCTAATTAGAAAAGTGAAGTT
TTTTagagaagtataatttttaagCAACTGTCTTTCATTGCTGTTTCGAT
TTGcttgatttttatttattcaacATTTGACCTTTTGTCAAGCATCTTCA
ATTTGTACGAATTCTTTTTCCAGGAAAGCTCGCAAGAAATTCAAAGGAAG
AAATccaaagtaaatatttttttcttttcctaaaTTGGAACGTTTGTATA
TTTCTTGAGGACATGGGACTCTATTTAGGTGATAACCTCTAAAGAACAAT
TAAGAACAACCATATTTTCCAGAAAGTGTTTATTTTATGCACCTTTTAAG
TCAATAtgtgagaacattttaagtacatTTAGGCCTGATATTCACGAGAG
AAAAACCTCAGCCAAATGTTTCTGGTTCATAAAAAATCGAGTTATTCCTA
CtcagtaattttttttcaagaagataattttcttctttttctaggATATC
AAGAAGACTGGTTCAGCATCAACCCTTAGTGCGTCAGGCTCATCACATAG
CAAGAAAGCTAGTCTCTCATCTCCCGGCCCTTCGACATCAAACAACGGAG
ACAAAAAAGCGAGACCGGTACCAAGTTATATGCAACCTACAAAAAGTTCT
AGAGCTCCCAAAAACCCAAATATCAAGGGTAAGAAGAAATAGCTAGAAGG
AGGTATGAAATattcaaatcattttttatgGATGGAATGCAAAATGATTA
TACGTAGGTGACAGGTGGtggaaaaatcatttttaataaaAGATATCGCT
CTGCACTGTTCCGGGTACTGCGACCTCTATATACCCTGGACTTCTGCTAT
ATTCGCCACCTAGGATTGGAGTTTTTGGAAAAGTCATACCCTAAATGGTA
GCACTAGTCGATGTGGCTCAATTTGTAATCCAATGAAATTTTCCGTCAAT
TTTTTTCACCCACATTGAGTCGTGCTACTATTATAGGGTTTAAAAGGCTC
TAACATTTTGCCTGGCCAGGATCGAGAAACTGTGTTTCGAAAAGGGGTAA
TGGAACGAATTTCCTACTTTCAGAGGGATCCTAGTCTTACGAAACAGTTC
CAGGGAACAAAGCCTAACCTGACGCCTAAAAAACCTTAAAGAGAGGATTT
ACCAGATTTGTTTAGGGCTTTGATATGCTATGGTTTGCGTTCACGCTTGT
ATGCCGATGTTCAACAGTTTTTTTCACGATCCCCTTGATCGAAAGAGTGC
GCATGCaccaaaaagtatattttagatatatagaaaaattaattaatata
AAAACGAGTGTGTATAGAattgaattattatttttgtttttatttttttg
actaTTGAACTTAAATTAAACCATTTCTTGTTAGGtattgtttttccatt
ttttctccattttgtatGAGTTTGTATATAGAAGTAtcagtttgagtaaa
gaaataGCTTGAATGACCCAAAAAAA

Coding sequence (CDS) from alignment at sc0000005:945087..959262+

>TCONS_00000725 ID=TCONS_00000725|Name=TCONS_00000725|organism=Clytia hemisphaerica|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000005:945087..959262+ (Clytia hemisphaerica)
ATGCCCATACTAAGATACAAAAACCAAAGCACAAGACAAGTAAAACATAC
AAGATTAGATGATGATGTAGATTTTGAACAACACTTTGATTATGGCATCT
TACTTGGCAAAGGTAGTTTTGGCACCGTCAATGAGGCTATTAGAATCGAT
TCTGGAGAAAAATTTGCAGTCAAAGTTATTAATAAGGAAAAGGCTGGGAG
TGCTGCTGTAAAACTATTAGAAAGGGAAGTTGCTATTATGAAAAAAGTTG
ATCATCCAAACATTATCTTCCTGGAGGAGGTTCTAGAAACACAGACGaaA
ATGTATCTAGTAATGGAATTATGTTCTCATGGAGGATTGGAAGAAATGCT
CAatgaaaggaaatattttttggaacAAGATGTGTTGGTAATCATGCAGC
AACTTGCAGATGCCATCGCATACATCCATGAAAATGACATCGTACATCGT
GATTTGAAATTGGATAACATATTACTGGCTGAACCCACAGATGAGCTACC
TTTTAATGTTAAGCTGACAGATTTTGGATTGTCATATACACGTGGTGGTT
CGGGTAGTGATTACATGATGAACCAAGTGGTGGGAACACCTATTTATATG
GcgcCAGAAGTGATAACCAACTATGGATACAGTCAACAATGTGATATTTG
GAGTCTTGGTGTCATACTTTTCAAACTGATTACTGGAAATCCACCATTCA
TGTCATTTTCCGAAGAAGATCTTTTCGATTTGATAAAGAAAGGAGAACTC
CAGTTTTCTCATGAAAATTGGAAGAATGTCTCACCCGCTGCTAAAGAATT
GGTGGAGGGATTGATGAAAGTTGACCCTGCTCATCGCTTAACTTCTAAAG
AAATTGTCTCGCATCCTTGGATAAAGGGCGAACAAGAAATGAACGGTACG
AAAACAATTAATGTGTTGGAAATGATGAAGGAATATAATATCGAACAGAA
AAAGctAGCAGAAGAGCAACAGTTAAAAGAGCAGCAACTACTCCAACAAC
TAAACAATGCAAATGAACAAAATGCTGACCCGACCGACAATGAACAAGGT
CCTTTGACAGCCATCGCTGAATTGGAAAGCTCGCAAGAAATTCAAAGGAA
GAAATccaaagATATCAAGAAGACTGGTTCAGCATCAACCCTTAGTGCGT
CAGGCTCATCACATAGCAAGAAAGCTAGTCTCTCATCTCCCGGCCCTTCG
ACATCAAACAACGGAGACAAAAAAGCGAGACCGGTACCAAGTTATATGCA
ACCTACAAAAAGTTCTAGAGCTCCCAAAAACCCAAATATCAAGGGTAAGA
AGAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000457XLOC_000457Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000725-exon-sc0000005-1491911889:945087..945402TCONS_00000725-exon-sc0000005-1491911889:945087..945402Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:945087..945402TCONS_00000725-exon-sc0000005-1510915933:945087..945402Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:945087..945402TCONS_00000725-exon-sc0000005-1575043694:945087..945402Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:945700..945804TCONS_00000725-exon-sc0000005-1491911889:945700..945804Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:945700..945804TCONS_00000725-exon-sc0000005-1510915933:945700..945804Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:945700..945804TCONS_00000725-exon-sc0000005-1575043694:945700..945804Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:946337..946417TCONS_00000725-exon-sc0000005-1491911889:946337..946417Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:946337..946417TCONS_00000725-exon-sc0000005-1510915933:946337..946417Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:946337..946417TCONS_00000725-exon-sc0000005-1575043694:946337..946417Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:946556..946613TCONS_00000725-exon-sc0000005-1491911889:946556..946613Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:946556..946613TCONS_00000725-exon-sc0000005-1510915933:946556..946613Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:946556..946613TCONS_00000725-exon-sc0000005-1575043694:946556..946613Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:947069..947145TCONS_00000725-exon-sc0000005-1491911889:947069..947145Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:947069..947145TCONS_00000725-exon-sc0000005-1510915933:947069..947145Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:947069..947145TCONS_00000725-exon-sc0000005-1575043694:947069..947145Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:947636..947723TCONS_00000725-exon-sc0000005-1491911889:947636..947723Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:947636..947723TCONS_00000725-exon-sc0000005-1510915933:947636..947723Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:947636..947723TCONS_00000725-exon-sc0000005-1575043694:947636..947723Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:948095..948170TCONS_00000725-exon-sc0000005-1491911889:948095..948170Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:948095..948170TCONS_00000725-exon-sc0000005-1510915933:948095..948170Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:948095..948170TCONS_00000725-exon-sc0000005-1575043694:948095..948170Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:948394..948506TCONS_00000725-exon-sc0000005-1491911889:948394..948506Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:948394..948506TCONS_00000725-exon-sc0000005-1510915933:948394..948506Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:948394..948506TCONS_00000725-exon-sc0000005-1575043694:948394..948506Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:948935..949020TCONS_00000725-exon-sc0000005-1491911889:948935..949020Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:948935..949020TCONS_00000725-exon-sc0000005-1510915933:948935..949020Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:948935..949020TCONS_00000725-exon-sc0000005-1575043694:948935..949020Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:950331..950408TCONS_00000725-exon-sc0000005-1491911889:950331..950408Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:950331..950408TCONS_00000725-exon-sc0000005-1510915933:950331..950408Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:950331..950408TCONS_00000725-exon-sc0000005-1575043694:950331..950408Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:950670..950789TCONS_00000725-exon-sc0000005-1491911889:950670..950789Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:950670..950789TCONS_00000725-exon-sc0000005-1510915933:950670..950789Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:950670..950789TCONS_00000725-exon-sc0000005-1575043694:950670..950789Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:957960..957995TCONS_00000725-exon-sc0000005-1491911889:957960..957995Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:957960..957995TCONS_00000725-exon-sc0000005-1510915933:957960..957995Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:957960..957995TCONS_00000725-exon-sc0000005-1575043694:957960..957995Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:958281..958488TCONS_00000725-exon-sc0000005-1491911889:958281..958488Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:958281..958488TCONS_00000725-exon-sc0000005-1510915933:958281..958488Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:958281..958488TCONS_00000725-exon-sc0000005-1575043694:958281..958488Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1491911889:958942..959262TCONS_00000725-exon-sc0000005-1491911889:958942..959262Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1510915933:958942..959262TCONS_00000725-exon-sc0000005-1510915933:958942..959262Clytia hemisphaericaexon
TCONS_00000725-exon-sc0000005-1575043694:958942..959262TCONS_00000725-exon-sc0000005-1575043694:958942..959262Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000725-proteinTCONS_00000725-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:945087..959262 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.07	88.234	166.423	172.572	12.4667	7.17359	14.7438	14.9714	30.5921	29.832	21.0066	29.5177	8.31252	5.05506	8.56712	11.1764	15.2002	14.5647	8.18259	10.8906	13.7339	15.0297	40.4935	35.1945	13.8751	9.75904	35.6477	37.4397	21.2906	21.9679
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
[Close]
BLAST of TCONS_00000725 vs. Swiss-Prot (Human)
Match: STK33 (Serine/threonine-protein kinase 33 OS=Homo sapiens GN=STK33 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 6.252e-105
Identity = 158/304 (51.97%), Postives = 222/304 (73.03%), Query Frame = 2 
Query:  161 QVKHTRLDDDVDFEQHFDYGILLGKGSFGTVNEAIRIDSGEKFAVKVINKEKAGSAAVKLLEREVAIMKKVDHPNIIFLEEVLETQTKMYLVMELCSHGGLEEMLNERKYFLEQDVLVIMQQLADAIAYIHENDIVHRDLKLDNIL----LAEPTDELPFNVKLTDFGLSYTRGGSGSDYMMNQVVGTPIYMAPEVITNYGYSQQCDIWSLGVILFKLITGNPPFMSFSEEDLFDLIKKGELQFSHENWKNVSPAAKELVEGLMKVDPAHRLTSKEIVSHPWIKGEQEMNGTKTINVLEMMKEY 1060
            +V H R+++    E+ + +G +LGKGSFG V EA   ++  K+A+K +NKEKAGS+AVKLLEREV I+K V H +II LE+V ET  KMYLVMELC  G L+E+L+ + +F E +   I+Q LA AIAY+H NDIVHRDLKL+NI+    L +  +E+  N+K+TDFGL+  +  S S+ M+    GTPIYMAPEVI+ + YSQQCDIWS+GV+++ L+ G PPF++ SEE LF+LI+KGEL F +  W ++S  AK +++ LMKVDPAHR+T+KE++ + W+ G + ++  +  NVLEMMKE+
Sbjct:  100 KVPHIRIENGAAIEEIYTFGRILGKGSFGIVIEATDKETETKWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQVFETPKKMYLVMELCEDGELKEILDRKGHFSENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMVKSSLIDDNNEINLNIKVTDFGLA-VKKQSRSEAMLQATCGTPIYMAPEVISAHDYSQQCDIWSIGVVMYMLLRGEPPFLASSEEKLFELIRKGELHFENAVWNSISDCAKSVLKQLMKVDPAHRITAKELLDNQWLTGNK-LSSVRPTNVLEMMKEW 401
The following BLAST results are available for this feature:
BLAST of TCONS_00000725 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STK336.252e-10551.97Serine/threonine-protein kinase 33 OS=Homo sapiens... [more]
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