TCONS_00001590 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001590
Unique NameTCONS_00001590
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4079

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001590 ID=TCONS_00001590|Name=TCONS_00001590|organism=Clytia hemisphaerica|type=transcript|length=4079bp
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA
AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA
TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG
GCGAATACGTTAAACAACGTTGGAAGATTGTGAAAAAAGTAGGTGGAGGA
GGTTTTGGTGAAATCTATCAAGGTCATGACACAGTCACTCATGAAATGGT
GGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTAAAGATGG
AAGTTGCTGTGCTGAAGAAACTTCAAGGGAGAGATCACGTGTGTCAGTTT
GTAGCTTGTGGACGCAACGATAGATTCAATTATGTCGTCATGTCGTTGGT
CGGACAAAACCTAGCGGAATTGCGACGTAGTCAATCTAGGGGTGCATTTT
CTATTGGAACTATGCTGAGATTGGGAGTGCAGATCTTGAATGGAATAGAG
GCTATACATGACTGTGGATTCTTACATCGAGATGTCAAGCCTtcaaattt
tGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGTTGGACT
TTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGAGCACCT
CGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCTGCTATCACAGC
TCATGAAAATAAAGAAATGGCACGTCGTGACGATTTATGGTCTGTGTTTT
ACATGCTTGTTGAATTTGCTCAAGGAAGCCTTCCCTGGAGAAAATACAAA
GATAAGgaAGAGGTTGGGAAATTCAAGAAAGCATACGAACATAAACAACT
GTTGAAACACATGCCTGCAGAATTCAAAGAGTTTCTTGATCATATCAAAG
CATTGGAATACGCTGATAAGCCTGATTACGATTTCTTACGCCAATGTTGC
GAGAATGCACTCATGAAACGTGGTATCCGCCAAACAGATCCGTTCGATTG
GGAAAAATCTACAGTAGATGGCTCCCTTACCACAACCACATCCAGCACTT
CCAAATACATCGCTACTCCACAAGCTCTCAAACCTGACAACGCGCTCAAT
AATCCGTCCGACTTGCCGCGCTCGAATACCGTTCTAGCTGCAGGGGAGTT
TAGTTTACAGTATGATGAAGAGGACCAGCAGCAAGGACCGATTAATGTTC
AAGTGCCTGAAGGACGACAGCCcgaagtcattaataaaaagGAAGCATCA
TCGACTCCGGTGAAACTACCGAAAGCTTTCCTTCAAGCCATGAAAGAAAA
TATGTTAGCCGACGCTCGAACTAAAGATTTCAAACCGTCTGCTGCTAATC
ACGacaagaaaaattcaaagataCCTGTTTTAAAGGGGAAGTTAGCTACA
AAATCACAGAAACAACATGACTCAGGATCTACTAACCATGCTGGGAAAGT
TGCAACTCAACCAACGCCCAAAACAGAGGATTGTCCAAACTTAGAGAAAC
GCATTTCTCCGGagattttgattgaaaatgtcGATCAAAATGGACCGGCT
GAGGGcgtttgtaaacaaactgaagTGGATTCGAAAAACGAAAACAACGT
AGAACACAGTAATGATAGTAAAAGTAAAGAATCGAGCAGTCGAACTAAAA
CTTCAAAAACCGGGAAAATTGATGAGAATAACACCAAAGAAACCaataag
aaaatattgattCAAAAACAATTAGAGGAAGGACCGTTCTTTGTTCCTAC
GAAAACAGAAGATGAGGTTTTCGACCCTGGTAACGAAATGCTGGTTAACT
TACTAGGCAATATtatggaaaataaaaacaagaaactatCTTTAAATCAA
GAAGAAATTGTAGACACTGCAGATAATCCAAATTGTAACGTAAATGAGGA
ACCTGCAAATATTTATAATGAGGAGATTAAAATATCAGCTGATTCTCCAA
AGAGAAGCAACGACGAATCGCTACAACTTAAATTACCGGAAAATTTACCG
AAAAATAGTCAAGTCAATATTGCCGAACAAAATATCCCTGTTAAGGTAAC
CAAGAAAAACGAAATTAATATTTATCATGGCGAGATAAATAAAGAACTAA
ACCATGTAAATGATATACCAGAGGTCAAAGTAAGGACTTCCAATCAAATT
GATGTAGCTGTTGAAAGTAAAGAAAATGTCCAAGATGTTCGGAAAAGGAC
TTCAAATCATAGTGATCACACGGTTGAAAGCAAAATAAAGGATTCTAAGA
TCGAAAACGACAaggacttgaaaacaaaagcaacTATTGAAGTCAAATCA
GATGCGAAACCATCTACCAACATTCACAAGTCCagttctttttcgttttt
gaaCGCAAATCTTCTAGCAAACATAGAAGACCCTATAGAGCCAGAACACG
TGATCGATGCTAATGAAACCAGtattaaacttttgaaattagaACGGAAC
CCCTCATCAGAACATTCGAAAAATTCCTCAGTCTCGAAAAGCAAAGAAGA
AGAAATGGTTGAAAAGCATTCAggagaatctgaagttgaagatCCATCTT
TGGAGAAACCGAAGTTGCTTCCACCAACACCAACTCACAAACAAGACGCA
AAGTCACACTACAATAATGATCAAACTGAAACTGACAATAACGATCTACA
AAAAAGTGATCgattaaagatatttcaaacACCCATAGAAATTGGGAGGA
AAATTGAACCAGCCAAACATCACGAAGAGATTGTTGACCGTGATGAACTT
GAGGAGCGTGACTGTGCACTAGGCACCATTTACAGTGATGATAAACTAAC
TTCTGGTTATTCGTCACATCACGAAAATCACCAAGCAAAGGAAAGCTTCC
ATAATCATCATCAACCCATTGTTTTGGACGCGAAACAAGATAAAAGATAC
TCTACAGACAACCTACCACAACCCTCTTTAGAGATTCGACCAGATGCTCC
TGGCGGCAATGACATTGGAATCCTTAGATCGTCATCAAGTAGCAATCGAA
TAGCAGGCGGCGCCTCTTCATCTAAGAtgaacaaaacattcgatttacAA
TCTAACTACATGGACTCGTGCATAGATACAAAGAATCGACGTAAAGCTGA
AGTTTTAGCTGAAGATTCTATGGATGAAAATTCTGAAGGATTTCGTGGTG
AACCACATGAGAATAAATACGTTGTTGAGAAAACTGAAAATATACATTAT
TTGGAAGATGCTTACACCGGTGAAAATCCTTCGTCGGGTATAGTACAAGA
TTCTTTCGAAGAACTTAAAGTTGGACCACGGTTTACTGATAAAGAGTATT
CCAACGAAAGTCTCGATAGCCCAGAATTCAATACGAACGAAACAAAGAAA
GATAGGCGAGGCAGTAAATCCTCCTTAGCAGAGACGTTTATCAAACGGAA
AAATTCGGCcagtaatttttttaagaaagataagaaaaagGACAACTCGC
CCGATTATAAGGCGAAAAATGATAAACGACGTTTCGATGATATTCGCATG
AACGCCGACCAATCAGATCGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCC
TCAACCGCCGAGTGGTCGACGCCGTGGTGCCAAGATCGAAGGGAGgtTTC
GAAGATACAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAACTGA
CAAGTTAAATGAGATTCTaggtatatatttttcaatttttagtctTTTTA
CCTACTGTAATTCTTTTGATGAAATGCCATTATTGACAATAGATctatct
tatcggagttttctaaaaaagtgatgcattgtggggttgtttcgggggta
ttacaatagaaatacccccgaaacaatcccacaatgcatagctgttttag
aaaaatccaaAACTCCGTAAGGTCTATTAGGCAAAGCCTTTAAGAAATTT
TGCTTACaagaaaatcttaattttcGCCGAATAAGATTCCTTATTTTTTA
CCGTCTTCGATTTTTAATCGGTTTTGATACTCGATTTAttttaaaagtag
atttttaggaaatactCGAGTTTAtagttttcttgattttaccaaaagat
ttttaaaatcctcttgattgatattttta
Run BLAST on NCBI

protein sequence of TCONS_00001590-protein

>TCONS_00001590-protein ID=TCONS_00001590-protein|Name=TCONS_00001590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1180bp
MVASTDDTPDLLRIGEYVKQRWKIVKKVGGGGFGEIYQGHDTVTHEMVAL
KLESANTSKQVLKMEVAVLKKLQGRDHVCQFVACGRNDRFNYVVMSLVGQ
NLAELRRSQSRGAFSIGTMLRLGVQILNGIEAIHDCGFLHRDVKPSNFAM
GNTKQTNRIVYMLDFGLARQYINNEGNVRAPRAVAGFRGTVRYAAITAHE
NKEMARRDDLWSVFYMLVEFAQGSLPWRKYKDKEEVGKFKKAYEHKQLLK
HMPAEFKEFLDHIKALEYADKPDYDFLRQCCENALMKRGIRQTDPFDWEK
STVDGSLTTTTSSTSKYIATPQALKPDNALNNPSDLPRSNTVLAAGEFSL
QYDEEDQQQGPINVQVPEGRQPEVINKKEASSTPVKLPKAFLQAMKENML
ADARTKDFKPSAANHDKKNSKIPVLKGKLATKSQKQHDSGSTNHAGKVAT
QPTPKTEDCPNLEKRISPEILIENVDQNGPAEGVCKQTEVDSKNENNVEH
SNDSKSKESSSRTKTSKTGKIDENNTKETNKKILIQKQLEEGPFFVPTKT
EDEVFDPGNEMLVNLLGNIMENKNKKLSLNQEEIVDTADNPNCNVNEEPA
NIYNEEIKISADSPKRSNDESLQLKLPENLPKNSQVNIAEQNIPVKVTKK
NEINIYHGEINKELNHVNDIPEVKVRTSNQIDVAVESKENVQDVRKRTSN
HSDHTVESKIKDSKIENDKDLKTKATIEVKSDAKPSTNIHKSSSFSFLNA
NLLANIEDPIEPEHVIDANETSIKLLKLERNPSSEHSKNSSVSKSKEEEM
VEKHSGESEVEDPSLEKPKLLPPTPTHKQDAKSHYNNDQTETDNNDLQKS
DRLKIFQTPIEIGRKIEPAKHHEEIVDRDELEERDCALGTIYSDDKLTSG
YSSHHENHQAKESFHNHHQPIVLDAKQDKRYSTDNLPQPSLEIRPDAPGG
NDIGILRSSSSSNRIAGGASSSKMNKTFDLQSNYMDSCIDTKNRRKAEVL
AEDSMDENSEGFRGEPHENKYVVEKTENIHYLEDAYTGENPSSGIVQDSF
EELKVGPRFTDKEYSNESLDSPEFNTNETKKDRRGSKSSLAETFIKRKNS
ASNFFKKDKKKDNSPDYKAKNDKRRFDDIRMNADQSDRSEESSKAVVPQP
PSGRRRGAKIEGRFRRYKMYAVRNPKGGGN
Run BLAST on NCBI

transcript from alignment at sc0000011:633542..645024+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001590 ID=TCONS_00001590|Name=TCONS_00001590|organism=Clytia hemisphaerica|type=transcript|length=11483bp|location=Sequence derived from alignment at sc0000011:633542..645024+ (Clytia hemisphaerica)
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA
AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA
TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG
GCGAATACGTTAAACAACGTTGGAAGATTGTAAGTCgatattttcatatt
tgtcAAAGAGTTCTTGGCTTAACATTTCAATATTTGTATGAAATCATGTT
AGCAGCTTATCAAACTAATTAGAATAGAATGGCTTCCACAAGAGAAATCA
GAACACAAAAAACCAAATTCAAATACCATTTTAATTGGAATCCTCAAGCT
GCTGGCCCTTCTTAGATGTTTAGGCATCTGtctattaaattttttttctt
ttttaaataaaaatttcttcaaCATGTGTTCTCCAAAAGGGTCACTGCTA
TTTGTCATTGTTGATACTATTTATATGCTTTCTCCCTACTTGTATctcat
ttcactgaagattggcGCAAAAGccccatgaaactctgagtatGAAATAA
GAAGTTAACTCTTAAAATATGATGCCTTCTCCTTACATAGAGATAATGGG
AAAAAGAAGCTTTGATCTCTTTGATCTAATGCTTGATTATAACATGCTTT
GTAGTTGCATAAAGTAGTTTCTTATAAACATTAGGAATCGTATGAAATGT
TTACAGTTATTTCTGCCCCCCTCtaattaaattgtttttattttgtctta
GGTGAAAAAAGTAGGTGGAGGAGGTTTTGGTAAGTTGCAATGTTCTATAG
TCACAAATaggttgaaatatattttttttagaaattttagaaatgcAATC
CTTAGTAAGATTATTCAAATTCTctgatttcattaaaatatgTACCCTTC
TAGAAATGTATAAAATATTGCAAACCTCGTTCTCAAAGCCTTGTTGCTAC
GATACTTCAACTCCGTCAGAAGACAAAATTAATGTTTACAAGCAGTTTTA
TATCTTTTGGGAAAACATATTACATGTGTAATTGTTTGAAGTAATTATTT
CAATTGAAATTGAGCCTCGCAATGCTCTTGATTTATATCGAGAAGTGTGT
ACTGTAAACTGATTTTTGGGATTCATTTTTGTTTcatctcttttttttta
acttaaacTTTTAGGTGAAATCTATCAAGGTCATGACACAGTCACTCATG
AAATGGTGGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTA
AAGATGGAAGTTGCTGTGCTGAAGAAACTTCAAGGTGTGTATCTCCCAAG
TTAATTAAAGTCTCTCCTCAttaggggccatccatatagtacacATGCAA
GAAAGGGGGGGTGtaaaaaatttggcatttttgttggTACGTGCTATTTG
GATAACCCCTTACGTGATTGTTTTAAAAGCAGAGGTTTGAGAttaaatat
ataaattttttgaatttgtagAATTATTTGGTAAAGAAGATTTTCTAAGG
GCCATATTAAAGATACAGGCAAAATGTAAAACCTGTTTAAAGgtttcatt
ccattttatatccatacatggAAGTTGAAGAACATGTCCTGGGTGGGGGT
TTAAGGAAATTACTTGCATTTTTCCAGGGAGtttgttttaagtttttctt
tcaaagggtTTTGGTGACCAAGAATCTTCTGcctgtattttcttttttcc
agggGCAAAATGATAAGCTCGACTGAGTACAAAGAGTATTTTTTGAATCT
CCGGGGATGTAATTTAAAttacttaaaaagtttttctgaAGCTTCCAAGG
GGGCAAAGATCCATTTAAATGCATCCAAACTCACTTTGTGTTATAAAGAA
GAATTTTCATAAGGGTAATAGAAtccttttttcaagatttttttttgtaa
atttttcctTTTGAAGGGGAAATCCCCTTAATCGAATCGTCCAGCTCTTG
GATGGATACTAAATGGAAGTTCCAATAATATTATCAAGAACTATTTTAAA
CTAATCGTCTGACGAAATTTTCTAACCTGATTTTCATCCCTAGTGATTTT
AATCGGGTTGAAGGTAGTCTAGAGCTAGACTACTAATTAAcatcagtttt
actcaaaagctTCTTTTACAGTAGTAGAAAAAACCTACCTAGAAGTTTGT
TTACTTCTCGAGTGTTTGAATTAGTATTGACACTATTCCAACTTCCCGTA
cggcttttttcttctttttgactttgagGCAGGATTGCTCCAGCTACGTT
TTGTGTTAAAGAATAGTGGTCTGGAAATCGAGACTAGTTTGAAGGAAAAA
ATTCAACTTAACGATCATTAGTACATTAAGTATTGTTATTGATCATTTTT
AGGGAGAGATCACGTGTGTCAGTTTGTAGCTTGTGGACGCAACGATAGAT
TCAATTATGTCGTCATGTCGTTGGTCGGACAAAACCTAGCGGAATTGCGA
CGTAGTCAATCTAGGGGTGCATTTTCTATTGGAACTATGCTGAGATTGGG
AGTGCAGATCTTGAATGGAATAGAGGCTATACATGACTGTGGATTCTTAC
ATCGAGATGTCAAGCCTGTAAGTTGTATTCCTCAAGATAAACACTGTATG
TTTTTATCATCATTTTTGGGGATATAATTGTCCATGTGCAACCATCTAAG
attaaaattttagtttttttaaatctgatgtaTTTTAGGTTTTCACTTTC
GAAACAGTGAGCGTTTTAATTTAGAAGTATGACGCTTATAAGCCTAGCAT
ACCCAGGCTGACATTTTTGGCTTCAACACCttagaacaaaagaaatttaa
gGATATacgtgttttcttttttataagcatacaaaaatgcaaaagctggc
tcggaaatgcttagattgagagatttacaaagctgaaaaatgctttgagG
GATGCTTATAATCCTAAGCAAAACTTTAGAGAAATTTcgaaattccagcc
aaaaacaaacaaaatctaAAAGGAAGCTCAAAGTAATAGCATATGCTTGA
ATTGTTGCTATatatgagcctagatatgcttataagcgcaatgcttatta
aaaaaaacatgtgcCGAGCTTCAGCTCAAAATGAACACTATACTCGAGAA
AAGAACGtttgtaatttttgttgttatgatatcttttctttttttaagtc
aaattttGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGT
TGGACTTTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGA
GCAGTGAGTACTTCCATTCAACCTATcttattcattttgattgttttaac
cctttgagcatcttcattttttaccaAAGATGCCAATTCACATTTTTTAT
TGCACACTCGCAAAAATTCAAGTCAATTGGAAATAGTTCGAAAGTTCtca
acaaattttcttttggaaagaAGGGGATATTAAAGGGTTAATAACTACAA
GGAAGGATGCTGATTGTTTTTCGTTGTTACATTATTTTTGTGGTATTCTT
TATTTCAGCCTCGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCT
GCTATCACAGCTCATGAAAATAAAGTAAGAAATTCGGTCCATTTAATTGA
TTTCATTTATTATAACACCAAAATGCAATATTTGTAATGAAAGAACTGTT
GTATAAACATTTCGAGACATGTTAACTGatcaaatttcatcattttgagA
CATTTTTTGAGATCATAAATTCCATTCGCTGTAATGGGCTTTCCGCCTCC
CTTTCCCTTCTTTGGACATAAAGTATGCgtactgaaaatattaaattaat
ATTATCTCGTAACAGTTATCATATCCTGTATTATCATGATTATATACATA
TCGAGTAAGTCCAAATAAAAGTGACGCTTCTACCAGTAAAGATCAACACA
CGTTGGAACCCTCTCccacaaaaatttgcgaaaacgTCATCCCCAGTGGA
CAATAATACTCCAATATTTGTCCCcgataaaaataatcaaataaacaaat
cctcactcgctgcaaaatgtttcactttttcctattcccactgaattttt
ctGACTTCGTTTTGAagtggaattcaaatccccagccataaaaacatgtt
aattaaTCCCCATCCAGTTTCAGTCCGCTTTTTTACCTCGATAGGCTGAA
AGACCGACATAAACTTCAACTTCAGGTTATTTCAGAAATCCAAAAGTCGA
AAAACAATTTgtaaaatgtataaaaattgTCTTGTTTATAGGAAATGGCA
CGTCGTGACGATTTATGGTCTGTGTTTTACATGCTTGTTGAATTTGCTCA
AGGAAGCCTTCCCTGGAGAAAATACAAAGATAAGGTATATCATtgcctct
tttttttttctggcaAGTTTTCGCAAAGAGTTTTTATTAAATGATTTACG
GCGTGTGTAGGTACTGCCAACATACCTAGAAAGTTTGTAGTACGTATTCA
CCCCTCAGTTTTGAACTGTAATAGATAGAAACAAAAAACTCCAAATTTCT
ATATTTTCTCTCAAacgcttttttaaatttcaggaAGAGGTTGGGAAATT
CAAGAAAGCATACGAACATAAACAACTGTTGAAACACATGCCTGCAGAAT
TCAAAGAGTTTCTTGATCATATCAAAGCATTGGAATACGCTGATAAGCCT
GATTACGATGTAAGAACAACACTTTCATTTTCCTGCTCCTTTTCTTCCCA
GATCTTTTAAAAGTAGCTAATATCCATAGCTTGTTCTATCCATAACCTGG
GAGATTTTTGAATACCACTATAGGAAGGAATGCCAGCTCTATTCTCATTT
GTATTCAGTCTTACCGCTAAGTCTATAGATTACTTGGTTACTTAGTTTAC
TTTACAGTTCAATATTCTTCAATTTCATTTATAGGGCTTTTGCAGAAAAA
CTTCGTTcatagggggtggaggatatattattttcctcaatgatctaccc
ctggacattttgatttttcaccccctggacaagcatcaaatcgaccccct
ggacactaaaatttacccctggacattagaaattcaccccatggacatgg
cagtttttcaggattttttcgatacccctggacaatatatcctctaCCCC
CTATGGAAGgctttttctggaagagcccattctatGGTGTCCCGCCAACT
TTCATGTATTTCTGTATGTTAAATTCTCTTCATTGTCCTTTTTAACAGTT
CTTACGCCAATGTTGCGAGAATGCACTCATGAAACGTGGTATCCGCCAAA
CAGATCCGTTCGATTGGGAAAAATCTACAGTAGATGGCTCCCTTACCACA
ACCACATCCAGCACTTCCAAATACATCGCTACTCCACAAGCTCTCAAACC
TGACAACGCGCTCAATAATCCGTCCGACTTGCCGCGCTCGAATACCGTTC
TAGCTGCAGGGGAGTTTAGTTTACAGTATGATGAAGAGGACCAGCAGCAA
GGACCGATTAATGTTCAAGTGCCTGAAGGACGACAGCCcgaagtcattaa
taaaaagGTATGTTCTTTCTacttctttctttcttctttctatcTACTCT
ACTATTTACTGGAAAATTTCACCAGTTGGAGCGAAATTCCTCTTCGTTTC
CTGAATTTCgtctttatttttgttattttattctAGCTTATCACAGTTTT
CTATGAAACAGAGGGCTAAATATATATATAGACTTTCGTGAAcctttgaa
taaaaaatattcatgtaACATGTGTTTTTTCAAGGTTACAATAGCACAcc
gctatgcaaacgtcataattattacttttaacatttgaccgaaattcaat
cttaccatccttttcatcttgattcgtaaTGTGTGCAAGTTACTTTGGTA
TTTAGTCCTGTAGAATTTATAGTCGACCTAGAAAAAATTCAGataaaagg
tttctatataccgttggaaagataattttattaGCTTTCGAATGAGGGGT
ATAGTCACATTTTACACCTTGGGCAAAATAAGTTATTGACAAAATGGTGA
CAGGTggtatttttgctaaattccgaaAATGAGCACTTCAAAGGCTTTTG
AACAGTTCGCTATAAGTCAGGATTGGCTCATGATACAaccttgaaacttt
gcaaaacttCTCTGAGAATGGTAAGGAGTatttagaaaattcaaaattta
aaaaaaaaaatcgaaaaaaatgatgacgtcatcaaaaatgacaatttttg
ttaaaaaaagcatgtttttCGACAAAATATAACTAAAACTGTTTTAATGC
GAAGTAAGTTTATATTAAAATGACCTAATATTTTCTACACATTATCTGCT
AATCATAAAACTGACATAAATTTAGTAAAATTTAGCCATAAACATCATCG
ATGCTTCTCAAAAGATCGATTCTGAGCAAGGTTAGCTTATAACGAGTGAA
TTAGATGGTAGATGTGAAAAGTTAAAGCAAACTCCAACGTGAGACTCGAT
ACGACATTAATTCATTTTAAACTATTCGTAAAATCCTTAATAAAAAACAC
TGACTGGAAGCATGAAAAACATAATTGCAAGAAACCTACTTATGAAGACG
ACATTTCTAATAAAAAGTTGTACTGAGCTAAACAAAAATATCCATAAAGT
TTCTATCTTCAAGATCTACGTCATAAATAGGAACATTGTCCTCATTATCA
TTATCGATTTCGATATTTCTACACGATGTACCAAGACACTCTTTGCAAAA
AGTGGTACATTTCAGACCTGATTTACGACAGGTACAACGATTGCTATCGC
ATCCACTTTTGCAATTGTCAATAAGTGTAATTGAGTTGCAAAAGCAATTA
ATTCAAAGAATGATGGGATTAAAAATCGGACAAAAAGTATTcttgatgtc
tatttttagaatcactgCGGTATGTTATTGGCTCTCGCTAATTTGAAATG
GAAAAATGTAATTTGTTCGAACTACAAAGGGAttcgagtttgaaaaaaaa
ttaatgggTATTATTTCTTTACGGGGATTGAGTAGTTGTTCGGATTTTAA
AGATTCGTCTCgtataaaagaaatttgaattagtGAGAGCATTGTATTAC
TATCTCTTCATATTTTTAATCTAACTTGCATTTTCTGTTCCTTCGCACAG
CAAAATAGTTTCTTAGAGGAGCTTATTACTGAAAGTACTTTCATTGAACT
ATTTTTAGGAAGCATCATCGACTCCGGTGAAACTACCGAAAGCTTTCCTT
CAAGCCATGAAAGAAAATATGTTAGCCGACGCTCGAACTAAAGATTTCAA
ACCGTCTGCTGCTAATCACGacaagaaaaattcaaagataCCTGTTTTAA
AGGGGAAGTTAGCTACAAAATCACAGAAACAACATGACTCAGGATCTACT
AACCATGCTGGGAAAGTTGCAACTCAACCAACGCCCAAAACAGAGGATTG
TCCAAACTTAGAGAAACGCATTTCTCCGGagattttgattgaaaatgtcG
ATCAAAATGGACCGGCTGAGGGcgtttgtaaacaaactgaagTGGATTCG
AAAAACGAAAACAACGTAGAACACAGTAATGATAGTAAAAGTAAAGAATC
GAGCAGTCGAACTAAAACTTCAAAAACCGGGAAAATTGATGAGAATAACA
CCAAAGAAACCaataagaaaatattgattCAAAAACAATTAGAGGAAGGA
CCGTTCTTTGTTCCTACGAAAACAGAAGATGAGGTTTTCGACCCTGGTAA
CGAAATGCTGGTTAACTTACTAGGCAATATtatggaaaataaaaacaaga
aactatCTTTAAATCAAGAAGAAATTGTAGACACTGCAGATAATCCAAAT
TGTAACGTAAATGAGGAACCTGCAAATATTTATAATGAGGAGATTAAAAT
ATCAGCTGATTCTCCAAAGAGAAGCAACGACGAATCGCTACAACTTAAAT
TACCGGAAAATTTACCGAAAAATAGTCAAGTCAATATTGCCGAACAAAAT
ATCCCTGTTAAGGTAACCAAGAAAAACGAAATTAATATTTATCATGGCGA
GATAAATAAAGAACTAAACCATGTAAATGATATACCAGAGGTCAAAGTAA
GGACTTCCAATCAAATTGATGTAGCTGTTGAAAGTAAAGAAAATGTCCAA
GATGTTCGGAAAAGGACTTCAAATCATAGTGATCACACGGTTGAAAGCAA
AATAAAGGATTCTAAGATCGAAAACGACAaggacttgaaaacaaaagcaa
cTATTGAAGTCAAATCAGATGCGAAACCATCTACCAACATTCACAAGTCC
agttctttttcgtttttgaaCGCAAATCTTCTAGCAAACATAGAAGACCC
TATAGAGCCAGAACACGTGATCGATGCTAATGAAACCAGtattaaacttt
tgaaattagaACGGAACCCCTCATCAGAACATTCGAAAAATTCCTCAGTC
TCGAAAAGCAAAGAAGAAGAAATGGTTGAAAAGCATTCAggagaatctga
agttgaagatCCATCTTTGGAGAAACCGAAGTTGCTTCCACCAACACCAA
CTCACAAACAAGACGCAAAGTCACACTACAATAATGATCAAACTGAAACT
GACAATAACGATCTACAAAAAAGTGATCgattaaagatatttcaaacACC
CATAGAAATTGGGAGGAAAATTGAACCAGCCAAACATCACGAAGAGATTG
TTGACCGTGATGAACTTGAGGAGCGTGACTGTGCACTAGGCACCATTTAC
AGTGATGATAAACTAACTTCTGGTTATTCGTCACATCACGAAAATCACCA
AGCAAAGGAAAGCTTCCATAATCATCATCAACCCATTGTTTTGGACGCGA
AACAAGATAAAAGATACTCTACAGACAACCTACCACAACCCTCTTTAGAG
ATTCGACCAGGTAACCCTACCCCGAACCTAGACGACAACCTCCCTTCTTA
CTACCCTAGGAACAACTCCCTACCCCCTAAGTATCTACCACCCACGCCAA
GTAGAGCAGGACCCTCCAATAGTGTCGCTAAAACCAACAAGACTAATAAA
GAAAGTAGGACAGTGTTTAATGTGCTTTCAAATATAGTCGATGATTTGAA
ATTTCGTATACAAAACAAGGCGTTACGAACACGATATGGTAGTAGTTCGG
ACCTGACAACCACTGTTGAACGTcgttctaaaaagaaaaagagaatgtAT
AGAAGTTTATCAATGGACTGTTTAGATGCTCCTGGCGGCAATGACATTGG
AATCCTTAGATCGTCATCAAGTAGCAATCGAATAGCAGGCGGCGCCTCTT
CATCTAAGAtgaacaaaacattcgatttacAATCTAACTACATGGACTCG
TGCATAGATACAAAGAATCGACGTAAAGCTGAAGTTTTAGCTGAAGATTC
TATGGATGAAAATTCTGAAGGATTTCGTGGTGAACCACATGAGAATAAAT
ACGTTGTTGAGAAAACTGAAAATATACATTATTTGGAAGATGCTTACACC
GGTGAAAATCCTTCGTCGGGTATAGTACAAGATTCTTTCGAAGAACTTAA
AGTTGGACCACGGTTTACTGATAAAGAGTATTCCAACGAAAGTCTCGATA
GCCCAGAATTCAATACGAACGAAACAAAGAAAGATAGGCGAGGCAGTAAA
TCCTCCTTAGCAGAGACGTTTATCAAACGGAAAAATTCGGCcagtaattt
ttttaagaaagataagaaaaagGACAACTCGCCCGATTATAAGGCGAAAA
ATGATAAACGACGTTTCGATGATATTCGCATGAACGCCGACCAATCAGAT
CGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCG
ACGCCGTGGTGCCAAGATCGAAGGGAGGTAAGTAGATGTTGTTCTCTTTA
TCTATATTTCTACTACCGGTTGACCCAGAAATAAATATAAAGGTTTGATG
GTTTACTTTGTCCATAATAATATgaatttttactctttttgtcaagagga
aaggcaaacttaaaatttgacataaagctttttaaaatttgtaCAGTGGt
tctcaagttataagcttgTGAAGTCGAAATTCgcttttgaaaaagtccaa
aaacacATCAAAAAAGGATATCAAATTAAGCATCGTTTAacatttttcac
taaaataatttattttttttgagaaattattcAGTGTTACTGTTGTCTTA
TTTTTCGTCATAACTTTAGCGAGgataattgataaaaatcaGCTGAGATC
ATTAATTGAGTTGTAAAAGTCATTAGGATATAGTGAAATATGAGGTTTTC
TAAATATAATTGCGTTAATTTGATGgactttttcaaaatcaaacattttt
ctGGGGCACCCGGTAGCAATGATATGACTTGTAGTAGGAAAATTCGGGTG
TATCATCTTGAAATACTTCGAAATAGCATGGACGAAGTGTATAATTCCAA
ATTTCACTCAAAGTAATTGATTATCATTGCTCAAGGTAACCAACTAGCCA
GAcatgcggcccttaagggtgcttttttcaagctttccaaagtgcactgt
aagggtcgaaatgggcaaagatgagaaaaagtgcaCTCCAAGGgtgtgaa
atttgaaaatctgacCAAGTATTTTGccttaaattgctcaaaaattctCA
ACCACCGTAAGCGTCGATCGCCCAAATTAtgtcaaatttggctaaatctt
ctctgcactgtaagggtccgttTTCAAAGGCCAAGCTTTGGACCGCATGC
TCGGTCGTCTTTGAATCGCGTGCTCCCCCCCCGGGTATACTTAAAACCTC
CAAAAGATAAGGTCCCGTAAGATAAATGAATTGAGGCGTGCAAATTTAAA
TGTAAATTCTTACGCAAAACGCTCTTGCCCAGATAATGTTCTTAAAAGac
gtaatttgtaaattttattgataattttgaGTACACCATCTTAAAAATGC
CTCGTTTAGAGTCTAACTActaataaattttctttaaaaaaaaaaaattt
tcatgagtTTATCAATTATTTTACTCTTTAccattaattttattttaagg
tTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAA
CTGACAAGTTAAATGAGATTCTaggtatatatttttcaatttttagtctT
TTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTGACAATAGATct
atcttatcggagttttctaaaaaagtgatgcattgtggggttgtttcggg
ggtattacaatagaaatacccccgaaacaatcccacaatgcatagctgtt
ttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAAGCCTTTAAGAA
ATTTTGCTTACaagaaaatcttaattttcGCCGAATAAGATTCCTTATTT
TTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGATTTAttttaaaa
gtagatttttaggaaatactCGAGTTTAtagttttcttgattttaccaaa
agatttttaaaatcctcttgattgatattttta

Coding sequence (CDS) from alignment at sc0000011:633542..645024+

>TCONS_00001590 ID=TCONS_00001590|Name=TCONS_00001590|organism=Clytia hemisphaerica|type=CDS|length=3543bp|location=Sequence derived from alignment at sc0000011:633542..645024+ (Clytia hemisphaerica)
ATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTGGCGAATA
CGTTAAACAACGTTGGAAGATTGTGAAAAAAGTAGGTGGAGGAGGTTTTG
GTGAAATCTATCAAGGTCATGACACAGTCACTCATGAAATGGTGGCTCTC
AAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTAAAGATGGAAGTTGC
TGTGCTGAAGAAACTTCAAGGGAGAGATCACGTGTGTCAGTTTGTAGCTT
GTGGACGCAACGATAGATTCAATTATGTCGTCATGTCGTTGGTCGGACAA
AACCTAGCGGAATTGCGACGTAGTCAATCTAGGGGTGCATTTTCTATTGG
AACTATGCTGAGATTGGGAGTGCAGATCTTGAATGGAATAGAGGCTATAC
ATGACTGTGGATTCTTACATCGAGATGTCAAGCCTtcaaattttGCAATG
GGTAATACGAAACAAACAAATCGGATCGTTTATATGTTGGACTTTGGTCT
TGCCAGGCAATACATCAACAATGAAGGAAATGTCAGAGCACCTCGTGCCG
TGGCCGGTTTTCGTGGAACTGTCCGTTACGCTGCTATCACAGCTCATGAA
AATAAAGAAATGGCACGTCGTGACGATTTATGGTCTGTGTTTTACATGCT
TGTTGAATTTGCTCAAGGAAGCCTTCCCTGGAGAAAATACAAAGATAAGg
aAGAGGTTGGGAAATTCAAGAAAGCATACGAACATAAACAACTGTTGAAA
CACATGCCTGCAGAATTCAAAGAGTTTCTTGATCATATCAAAGCATTGGA
ATACGCTGATAAGCCTGATTACGATTTCTTACGCCAATGTTGCGAGAATG
CACTCATGAAACGTGGTATCCGCCAAACAGATCCGTTCGATTGGGAAAAA
TCTACAGTAGATGGCTCCCTTACCACAACCACATCCAGCACTTCCAAATA
CATCGCTACTCCACAAGCTCTCAAACCTGACAACGCGCTCAATAATCCGT
CCGACTTGCCGCGCTCGAATACCGTTCTAGCTGCAGGGGAGTTTAGTTTA
CAGTATGATGAAGAGGACCAGCAGCAAGGACCGATTAATGTTCAAGTGCC
TGAAGGACGACAGCCcgaagtcattaataaaaagGAAGCATCATCGACTC
CGGTGAAACTACCGAAAGCTTTCCTTCAAGCCATGAAAGAAAATATGTTA
GCCGACGCTCGAACTAAAGATTTCAAACCGTCTGCTGCTAATCACGacaa
gaaaaattcaaagataCCTGTTTTAAAGGGGAAGTTAGCTACAAAATCAC
AGAAACAACATGACTCAGGATCTACTAACCATGCTGGGAAAGTTGCAACT
CAACCAACGCCCAAAACAGAGGATTGTCCAAACTTAGAGAAACGCATTTC
TCCGGagattttgattgaaaatgtcGATCAAAATGGACCGGCTGAGGGcg
tttgtaaacaaactgaagTGGATTCGAAAAACGAAAACAACGTAGAACAC
AGTAATGATAGTAAAAGTAAAGAATCGAGCAGTCGAACTAAAACTTCAAA
AACCGGGAAAATTGATGAGAATAACACCAAAGAAACCaataagaaaatat
tgattCAAAAACAATTAGAGGAAGGACCGTTCTTTGTTCCTACGAAAACA
GAAGATGAGGTTTTCGACCCTGGTAACGAAATGCTGGTTAACTTACTAGG
CAATATtatggaaaataaaaacaagaaactatCTTTAAATCAAGAAGAAA
TTGTAGACACTGCAGATAATCCAAATTGTAACGTAAATGAGGAACCTGCA
AATATTTATAATGAGGAGATTAAAATATCAGCTGATTCTCCAAAGAGAAG
CAACGACGAATCGCTACAACTTAAATTACCGGAAAATTTACCGAAAAATA
GTCAAGTCAATATTGCCGAACAAAATATCCCTGTTAAGGTAACCAAGAAA
AACGAAATTAATATTTATCATGGCGAGATAAATAAAGAACTAAACCATGT
AAATGATATACCAGAGGTCAAAGTAAGGACTTCCAATCAAATTGATGTAG
CTGTTGAAAGTAAAGAAAATGTCCAAGATGTTCGGAAAAGGACTTCAAAT
CATAGTGATCACACGGTTGAAAGCAAAATAAAGGATTCTAAGATCGAAAA
CGACAaggacttgaaaacaaaagcaacTATTGAAGTCAAATCAGATGCGA
AACCATCTACCAACATTCACAAGTCCagttctttttcgtttttgaaCGCA
AATCTTCTAGCAAACATAGAAGACCCTATAGAGCCAGAACACGTGATCGA
TGCTAATGAAACCAGtattaaacttttgaaattagaACGGAACCCCTCAT
CAGAACATTCGAAAAATTCCTCAGTCTCGAAAAGCAAAGAAGAAGAAATG
GTTGAAAAGCATTCAggagaatctgaagttgaagatCCATCTTTGGAGAA
ACCGAAGTTGCTTCCACCAACACCAACTCACAAACAAGACGCAAAGTCAC
ACTACAATAATGATCAAACTGAAACTGACAATAACGATCTACAAAAAAGT
GATCgattaaagatatttcaaacACCCATAGAAATTGGGAGGAAAATTGA
ACCAGCCAAACATCACGAAGAGATTGTTGACCGTGATGAACTTGAGGAGC
GTGACTGTGCACTAGGCACCATTTACAGTGATGATAAACTAACTTCTGGT
TATTCGTCACATCACGAAAATCACCAAGCAAAGGAAAGCTTCCATAATCA
TCATCAACCCATTGTTTTGGACGCGAAACAAGATAAAAGATACTCTACAG
ACAACCTACCACAACCCTCTTTAGAGATTCGACCAGATGCTCCTGGCGGC
AATGACATTGGAATCCTTAGATCGTCATCAAGTAGCAATCGAATAGCAGG
CGGCGCCTCTTCATCTAAGAtgaacaaaacattcgatttacAATCTAACT
ACATGGACTCGTGCATAGATACAAAGAATCGACGTAAAGCTGAAGTTTTA
GCTGAAGATTCTATGGATGAAAATTCTGAAGGATTTCGTGGTGAACCACA
TGAGAATAAATACGTTGTTGAGAAAACTGAAAATATACATTATTTGGAAG
ATGCTTACACCGGTGAAAATCCTTCGTCGGGTATAGTACAAGATTCTTTC
GAAGAACTTAAAGTTGGACCACGGTTTACTGATAAAGAGTATTCCAACGA
AAGTCTCGATAGCCCAGAATTCAATACGAACGAAACAAAGAAAGATAGGC
GAGGCAGTAAATCCTCCTTAGCAGAGACGTTTATCAAACGGAAAAATTCG
GCcagtaatttttttaagaaagataagaaaaagGACAACTCGCCCGATTA
TAAGGCGAAAAATGATAAACGACGTTTCGATGATATTCGCATGAACGCCG
ACCAATCAGATCGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCCTCAACCG
CCGAGTGGTCGACGCCGTGGTGCCAAGATCGAAGGGAGgtTTCGAAGATA
CAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000830XLOC_000830Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001590-exon-sc0000011-1491911889:633542..633720TCONS_00001590-exon-sc0000011-1491911889:633542..633720Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:633542..633720TCONS_00001590-exon-sc0000011-1510915933:633542..633720Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:633542..633720TCONS_00001590-exon-sc0000011-1575043694:633542..633720Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:634293..634320TCONS_00001590-exon-sc0000011-1491911889:634293..634320Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:634293..634320TCONS_00001590-exon-sc0000011-1510915933:634293..634320Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:634293..634320TCONS_00001590-exon-sc0000011-1575043694:634293..634320Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:634706..634825TCONS_00001590-exon-sc0000011-1491911889:634706..634825Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:634706..634825TCONS_00001590-exon-sc0000011-1510915933:634706..634825Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:634706..634825TCONS_00001590-exon-sc0000011-1575043694:634706..634825Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:635894..636108TCONS_00001590-exon-sc0000011-1491911889:635894..636108Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:635894..636108TCONS_00001590-exon-sc0000011-1510915933:635894..636108Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:635894..636108TCONS_00001590-exon-sc0000011-1575043694:635894..636108Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:636690..636794TCONS_00001590-exon-sc0000011-1491911889:636690..636794Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:636690..636794TCONS_00001590-exon-sc0000011-1510915933:636690..636794Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:636690..636794TCONS_00001590-exon-sc0000011-1575043694:636690..636794Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:637050..637115TCONS_00001590-exon-sc0000011-1491911889:637050..637115Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:637050..637115TCONS_00001590-exon-sc0000011-1510915933:637050..637115Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:637050..637115TCONS_00001590-exon-sc0000011-1575043694:637050..637115Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:637783..637875TCONS_00001590-exon-sc0000011-1491911889:637783..637875Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:637783..637875TCONS_00001590-exon-sc0000011-1510915933:637783..637875Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:637783..637875TCONS_00001590-exon-sc0000011-1575043694:637783..637875Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:638075..638200TCONS_00001590-exon-sc0000011-1491911889:638075..638200Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:638075..638200TCONS_00001590-exon-sc0000011-1510915933:638075..638200Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:638075..638200TCONS_00001590-exon-sc0000011-1575043694:638075..638200Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:638740..639048TCONS_00001590-exon-sc0000011-1491911889:638740..639048Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:638740..639048TCONS_00001590-exon-sc0000011-1510915933:638740..639048Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:638740..639048TCONS_00001590-exon-sc0000011-1575043694:638740..639048Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:640700..642401TCONS_00001590-exon-sc0000011-1491911889:640700..642401Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:640700..642401TCONS_00001590-exon-sc0000011-1510915933:640700..642401Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:640700..642401TCONS_00001590-exon-sc0000011-1575043694:640700..642401Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:642717..643368TCONS_00001590-exon-sc0000011-1491911889:642717..643368Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:642717..643368TCONS_00001590-exon-sc0000011-1510915933:642717..643368Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:642717..643368TCONS_00001590-exon-sc0000011-1575043694:642717..643368Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1491911889:644541..645024TCONS_00001590-exon-sc0000011-1491911889:644541..645024Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1510915933:644541..645024TCONS_00001590-exon-sc0000011-1510915933:644541..645024Clytia hemisphaericaexon
TCONS_00001590-exon-sc0000011-1575043694:644541..645024TCONS_00001590-exon-sc0000011-1575043694:644541..645024Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001590-proteinTCONS_00001590-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:633542..645024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.14705e-07	0	1.29328	0.84015	0.539393	0.777992	0.158654	0	0.00260666	0.449181	0.537986	0.455029	0.632026	0.8619	0.0611973	0.329981	1.3476	0.949385	1.62373e-05	3.3725e-10	0.840891	0.799244	2.47397	1.98076	0.63031	0.212934	1.56841	1.22927
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
[Close]
BLAST of TCONS_00001590 vs. Swiss-Prot (Human)
Match: TTBK2 (Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1 SV=2)

HSP 1 Score: 421.779 bits (1083), Expect = 5.905e-125
Identity = 214/335 (63.88%), Postives = 256/335 (76.42%), Query Frame = 3 
Query:  135 DLLRIGEYVKQRWKIVKKVXXXXXXEIYQGHDTVTHEMVALKLESANTSKQVLKMEVAVLKKLQGRDHVCQFVACGRNDRFNYVVMSLVGQNLAELRRSQSRGAFSIGTMLRLGVQILNGIEAIHDCGFLHRDVKPSNFAMGNTKQTNRIVYMLDFGLARQYINNEGNVRAPRAVAGFRGTVRYAAITAHENKEMARRDDLWSVFYMLVEFAQGSLPWRKYKDKEEVGKFKKAYEHKQLLKHMPAEFKEFLDHIKALEYADKPDYDFLRQCCENALMKRGIRQTDPFDWEKXXXXXXXXXXXXXXXKYI---ATPQALKPDNALNNPSDLPRSNT 1130
            D+L +G  VK+RWK+++K+GGGGFGEIY   D +T E VALK+ESA   KQVLKMEVAVLKKLQG+DHVC+F+ CGRNDRFNYVVM L G+NLA+LRRSQSRG F+I T LRLG QIL  IE+IH  GFLHRD+KPSNFAMG    T R  YMLDFGLARQ+ N+ G+VR PRAVAGFRGTVRYA+I AH N+EM R DDLWS+FYMLVEF  G LPWRK KDKE+VG  K+ Y+H+ +LKH+P EF  FLDHI +L+Y  KPDY  L    +N++   G+ ++DPFDWEK+  DGSLTTTT+ST+  +    TP A+   NA   P DL R NT
Sbjct:    9 DILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVRPPRAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKERYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDWEKTGNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENT 343
The following BLAST results are available for this feature:
BLAST of TCONS_00001590 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTBK25.905e-12563.88Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1... [more]
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