TCONS_00001930 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001930
Unique NameTCONS_00001930
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001930 ID=TCONS_00001930|Name=TCONS_00001930|organism=Clytia hemisphaerica|type=transcript|length=2577bp
tgtagtttcttgttgTTTCTTTCAATCAATTGTTGTTTCGAACCAGCTCG
GTAAAACGCAACCGATAACAGCTATCATTGACAATGCTGAACAAATTCAA
GAATCGTACGAAATTATCCAAGTGACCAATACAACTAAAGAACTTCCTAC
ATTTTTCTGTCATTCAAACATCTTATCAAAGAATATTTCCTGGAAACCTT
GCAACAAAGTTGCTTTGGAAGAGCAATCTCATAAAATAAAAGAAGTTGGA
CCAGGACTTTATCTAGAGTTTAAGAAACATGCGAGTCCAGGAAGATATTG
TTTTGAATGTGAAGTAAATAAGGATGGTGTTGTGGCTACTAAAAACATAA
GCGTTCTATTAAAAGATTCATTCTGTGGCACTCCAACAAGAGAACAGGCG
TTGAAACATTTTCATGCTCGAAAGAAAGGTCAAGTATTCAAGCAATACAT
CCAATGTCCAAGAATGAACATTGAGAATCTTCATCTCCGTGACTTCATGG
ATAAATATGGTCGAACTAATTTCATGTTATCCTGGACAAAGATAGACAAA
TTTCATGATGAGAATCAATTGTATGGTTTCAAGTTGACCATCGACCTTGA
TGGCCATGGCTTTTCGTTCTCTATGTACACAAAATATGGTTTTAACAAGC
AACTGaaaatcaaaaaatcaacaaagacTATGAGAGGTCATGTGACTCCA
ATCACAAACTATTCAGTACCCCTGACCGTCTTTGGATCCTTTTGGATCAA
CCACAAACGACAAATCAGAGGTCACACCACAAGCTATAAGATGAACATCG
ATTTCCAAGCATTACCGAATTCTAATGAACTTACTGCCAAAGTCCATTTT
CGATCTCGTGAAGTGTTATGTGACGAATATGCTGAATCTCATAATGGCTC
GTACCCAACCTCGTGTTATCCATTCAAGAATTTAAGAATAACTGGTATGT
GCCGAAGATATAATTACAACACAAttggtttgtttgattttatCTACACC
AACAAAAGCAATTTGTACCTCCATTGGGAAGCGAATCGAAATGTGACACT
TGTAGGCAAAGCGGATAGTGGTCAAATGAATATGACTCATTTCAGATTAA
AAACTGAAACTTGGATAAAGCATATATTACCATGGAGTCATGGAAAATTT
AAATTGATTCCCAGGAAAGACATTGGTGGTGAACCTCCTTTCGGATACAT
TGAGctgatcaattttcaaaatggtgacGAAGACAAGATACTACTTACGA
CACATGTGGTACCTGAAAATTGCACACGACCAACAACCACACCCACAACC
ACACCCACAACCACACCCATCACTTCAAAACAAATCAGTACTACTACTTT
GATTTTGATCATTGTCACACTTTGCACAATCATAATTCTTATTTCACTAA
CCATGATTTTAGCTTGTCGGCGAATGAGACGAATTCTGAAGAAATCCATT
CAActacattttggaaaaaatcttgatccatcttttgaaaaagaaatgga
aaattaTGAAACAATGGAGATGGTTGAAGAAATTCCTTCAGTGATGCTGG
TCCACCCACATGGTTGCATTGAAATGGAGAATCTTGCTGTTTTCTTGGCA
TCCCAACTTAATACATTCGGTGTTCACGTTTATTCCGACATCTTACAAAC
GCAGAAAATTGCTAATGAAGGGTTGTGTCAGGTTTTGATGGAGAATTTTC
AAATAGCAGACTATGTTGCTATACTTTGCATGGAAGtATATAATCTGCCG
TGCCATCAACCATATCAATTCGTATTAAATCAGCTCGTATCAAATGAATT
TGTTTACAAGAAATCAtccacaaacaacaaaaacacAGACCAGAATGTTA
ACCGGTTTATCGCTTTACATTGTACAAACACAGAAGCCATTCCTTCATAC
CTCGTTCCAAGATCTTACAGCATTCCACGACAATTTTCAGGATTTGTTCA
AAACATCTTCGGTATCAAAACGTATTTCTCGTATTTCTATGATAAGATTT
TCGAACAGAACGTACCCGAATTTAAAGAGCGTAAAGAACACCTTCAGATG
TTGGCAGAGAAAATAAAGACACAAATTCACGTCAATTGCTATGCATCCAC
GTGCTCAAAGGGGACTTTATGTGAAGACGTTGTACCAATCGACCATTCGA
ATCTCGATGATGGTGAAGAGGATGTTATTCCAACGggagaagaaaacgaa
gagttagAAGATTCAAAAGAGACAGATTCTTTGTTTAGTTATGCGTCGAC
CAATGAGGATACGACGACAAATATTAACGATGATAACAAACACGATACTA
ATACCACCCAAAATAATAATTATGAACAGAATGTTTCAGAAAAGAAAGCA
AAAGAacggaaagtaacatttgctgATGAGCTTGACGACGAAGCTTCNCC
AAAATAATAATTATGAACAGAATGTTTCAGAAAAGAAAGCAAAAGAACGA
AAAGTAACATTTGCTGATGAGCTTGACGACGAAGCTTCACAATCTTAATG
ATCAGATATTGGGGCAACATTCACTTTTTTCAATACGTTCTTCTTTCTCG
GTTTTTTTTCCACCGAGAACAAATCTT
Run BLAST on NCBI

protein sequence of TCONS_00001930-protein

>TCONS_00001930-protein ID=TCONS_00001930-protein|Name=TCONS_00001930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=801bp
VVSCCFFQSIVVSNQLGKTQPITAIIDNAEQIQESYEIIQVTNTTKELPT
FFCHSNILSKNISWKPCNKVALEEQSHKIKEVGPGLYLEFKKHASPGRYC
FECEVNKDGVVATKNISVLLKDSFCGTPTREQALKHFHARKKGQVFKQYI
QCPRMNIENLHLRDFMDKYGRTNFMLSWTKIDKFHDENQLYGFKLTIDLD
GHGFSFSMYTKYGFNKQLKIKKSTKTMRGHVTPITNYSVPLTVFGSFWIN
HKRQIRGHTTSYKMNIDFQALPNSNELTAKVHFRSREVLCDEYAESHNGS
YPTSCYPFKNLRITGMCRRYNYNTIGLFDFIYTNKSNLYLHWEANRNVTL
VGKADSGQMNMTHFRLKTETWIKHILPWSHGKFKLIPRKDIGGEPPFGYI
ELINFQNGDEDKILLTTHVVPENCTRPTTTPTTTPTTTPITSKQISTTTL
ILIIVTLCTIIILISLTMILACRRMRRILKKSIQLHFGKNLDPSFEKEME
NYETMEMVEEIPSVMLVHPHGCIEMENLAVFLASQLNTFGVHVYSDILQT
QKIANEGLCQVLMENFQIADYVAILCMEVYNLPCHQPYQFVLNQLVSNEF
VYKKSSTNNKNTDQNVNRFIALHCTNTEAIPSYLVPRSYSIPRQFSGFVQ
NIFGIKTYFSYFYDKIFEQNVPEFKERKEHLQMLAEKIKTQIHVNCYAST
CSKGTLCEDVVPIDHSNLDDGEEDVIPTGEENEELEDSKETDSLFSYAST
NEDTTTNINDDNKHDTNTTQNNNYEQNVSEKKAKERKVTFADELDDEAXP
K
Run BLAST on NCBI

transcript from alignment at sc0000012:258311..268179-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001930 ID=TCONS_00001930|Name=TCONS_00001930|organism=Clytia hemisphaerica|type=transcript|length=9869bp|location=Sequence derived from alignment at sc0000012:258311..268179- (Clytia hemisphaerica)
TGTAGTTTCTTGTTGTTTCTTTCAATCAATTGTTGTTTCGAACCAGCTCG
GTAAAACGGTATGTAAATTTTGGTCAATTCTTGATTACTATCTAAAATAA
AGTTATAATCGTAAATAGCTATTATTTTCAAGTTGATAATTGATGATTGA
TTATATTTCAAGTTTCACATTAGAAGCTCTTCTGAACTATTGATCCTTTG
GTCAATTACCGTACGATTCTTCTACTTTCTTGTTCCCGGGAACACTTTCC
AGTACTCTTCTTTCAATCCAAGTTGAAAAAGTTGAATGAATTGAAGTACT
CAAAGCAAGTGACTTACCGTAATTGCGGTCAATCTTGCTACACTTTGTTC
GCTTATACTATAATTTCCGGTCGAGTGCTCCCCCAGATCGTTAGTCACCC
GACTATGTTTCCGATAAACTTTGACAAAATCTGAAGGTATAAAAGAGTCC
CCAATAGTCTTTAGCTCCAAACTAATCAGAGCTTTAAAGCATCTCCAGAT
TCAAAACGCGGACCATAAAACCTTTTCTTTTTTTTAAGAAACCCATAAAA
TTCTTTCACGGCAATGAAAAGTTTTTTTCGTTTATTTCAGCAACCGATAA
CAGCTATCATTGACAATGCTGAACAAATTCAAGAATCGTACGAAATTATC
CAAGTGACCAATACAACTAAAGAACTTCCTACATTTTTCTGTCATTCAAA
CATCTTATCAAAGAATATTTCCTGGAAACCTTGCAACAAAGTTGCTTTGG
AAGAGCAATCTCATAAAATAAAAGAAGTTGGACCAGGACTTTATCTAGAG
TTTAAGAAACATGCGAGTCCAGGAAGATATTGTTTTGAATGTGAAGTAAA
TAAGGATGGTGTTGTGGCTACTAAAAACATAAGCGTTCTATTAAAAGGTT
AGTACGTGTCTTACTGTCGTTTTGCTTGATTTCTATTCTCAAAAGTAAAA
CTCTACTGGCCTACAAAAAAAGACAATGACTCCGGCTAGTGGAGGAGAAC
TTAGTAAAATAAAAAAAAATAAAAAAAATAGTCAGTCTCGTAGTTGAGCA
CAGAATTTTCTTTAAACTTCTTGAAGAAGCCTTCTACTACTTTGAGCAGG
CTCTCAGACAAAAGTATATGAAGCGTTCCGGGAAAGATAATTGCTTATGA
TAATATACCCATAGAGCGCAGTCCTTTTATATTATTTTTTAATTTTCTGT
TACTGAATGTCAAACACACTCAAAACCAAACATAAAAAAGTGAAACCTAT
TTCAGCTTTGAGTGCTAGACAAGTGGCAAGTCTTTCTAGAATGTATAGTT
TTAACCAGTACGCCACCATTCAAATTATAGTTTTTGAATATTTCTTTCAG
ATTCATTCTGTGGCACTCCAACAAGAGAACAGGCGTTGAAACATTTTCAT
GGTTTGTGAACGATTCTGATTTTTGTTACCCTGAGAGAGATTTTGGAATG
TTGAAAAGCTACAATCCATTGACACACACCTGTGTCACAGACCCGCTGGG
ACCCCAGCAACACTGGAAAATTTGACCAGAATTTTGTCTCCGGTGGGAAA
AATACCCTGCATTTTCAACCCCACTGGAAAATAGACATTGATTTCGTCCC
CATTTCAAATTCAATAGAAAAAATTGCACTCTAAAATCATCCCTACTGAA
ATCTTTTACCTGAAAACAATGGAATTTATATACCTTCTTGGATTAGAACT
TTCCATCCCCATGTGGGAAGAAATTTCACCGGGGCTGTGAGACAGGGGTG
TATTCACGAAATTCATTTTTTCACTGTAAATTACAACAAATTTTCTCAAC
GAGTTCATCCAAAAATTAATGGGTGAATTATTTTTCCGCAAATTATAGCT
CGAAAGAAAGGTCAAGTATTCAAGCAATACATCCAATGTCCAAGAATGAA
CATTGAGAATCTTCATCTCCGTGACTTCATGGATAAATATGGTCGAACTA
ATTTCATGTTATCCTGGACAAAGATAGACAAATTTCATGGTAAATTAATT
ATTGAATTATTAAAATTTAACAAGCGCGACAATTCCATTTCCATCTTAGG
GGTGAGTTAAAAAAATGTGTTGCTTTAAAAGATTTATAGCCGTGTCAAAT
GATAAGTATATATATAAGTCGGATGGTACAGTAGTCCCGTCGTATCACAA
ACTTAGTTACGGGGTACTACTAATAACAGACGATGTCGGCTTAAGGGCTC
TGGTCATAGTGAAAAATCAATTTCAGAATTTTAAGATAAAACCTTATGTT
TTCGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGAAAAAATTAATC
TAAGTAATTACATCATGAGTAATTAAGGAATAAGTGTGGCATGGACCTTA
ATAAAACGATATAACGACGCTATTCATATACTTTTCACAAAAAAAGCCTA
ATCTCCTTGGGGAAATCATTGGCTACATCCCAAGTTATAGCTGTTTTCGT
ATTGAAATTTAGTGGCGAAAATTGCCAAAAATGAGGTTTTTTGGAGATTT
TAAAGAAAAGATACTTCCACAAAAATTTTCCGAAATTGTATTTTTAGGTG
CTAAATAGTAACATCGCCTGAACCAAAAGAAATTCCAAAATGTTTGATTT
TCACCGAGATTAGGGCTTTGAAAGGTGAAATACTCTTCTTCGAAAAACTC
TTCATTTTCTTCTTCATTTACTTTTTTCATTTCAATTTTTTCGATTTTTA
AATTCTAAAAAGGTAGGTTTAACATATAAAAAAAGTTGTACATTATTCTT
TTTAAAATGCAGAAATTGCAATTTAAGTTGGTGTAAAATCGAAAAATTGG
GTATGTCCAGAGCCCTTAACATGAAAACTCAGATTTGACCTCCGAAAATT
GCCCACAATGCTTTGCGCAGAAAAAAGTTCACGGTGAAATTTTTTACGCA
CAAAGCATTGTGGGGAATACTCGGGGGTCAAATCTGAGTTTTCATGCGAA
GCCGATATCGTCTATTTGAAAGTTGATGTTGAATCCCATTTACAGTCGAC
GTTCTCTTTATTCGATAATTATTTGTTCGACAAGTTTCCGTTTTCGATGA
AATTCAAAATCACCGTCGAATTTTCTTAAGAAACTCTGCTTTTCGATAGG
CTCCTTTTTTCGATAAACCTCCCTGAAAGTTTCCGATACCTAACCTGTAG
AAAACTCTTTCAGAATGATTTTTGAAAATAAAGATTTAAACTTTTATGCG
TTCAAGTTAAAATTTTGAAATTCCATTCCTCAACATTTTTCAGCGAGACC
TTCAATATTTGACCTGACAATCAAAACATTTGAATCTGACTTCTATTCTT
CTTCCTCAGTTTTATGATTCACTGATAATCTGATGTGTATTGGAATTTTT
ATAGATGAGAATCAATTGTATGGTTTCAAGTTGACCATCGACCTTGATGG
CCATGGCTTTTCGTTCTCTATGTACACAAAATATGGTTTTAACAAGCAAC
TGGTAAGACCTGTGAAATGGAGTATTGTATCGTTTGAGTATTTTTCTTTA
TTCGAACTTTAACTTCTAATTTGCAAAATTTATGGAGAAGGGTTTAGACA
AGATGGCTTGGAGACGTATTGTGTAAGTTTTAGCCTCAAATATTGGCTAG
CCCCTTATAAATATAAGTTTTGGGGTAAAATTGTCCCCACCTATACAATC
ATATTTTTTATTTATAAGGGCTGCCTGCAACCATAACTGTAGGGCGGGAG
GGTGGTAAAAAAGATTCTCATTTAGCTTCAAATCCATCGCTGACGGATCG
AATGAGCCCATCTTTTGGTTCACTTCTGCTATTATGAATATAATATAGAC
CCGAAGCAATGACATTTAGACAAAAAGGGTGGAAGGCGGCCGCCCATTCG
CCAGGTCTTGGCCTTGAGTTGGTTATTAGCTTAAATTGCAGTTAAATTAC
AATCTAACGGGTTAAATAGACATTGCTCCACTTTATAGACAAAGTTTTTT
TAGATTTAAACACCTTCTTTGCATAATTTCTAAAAATTAGTTTGAAGAAA
ATAAACTTTGGGTATTGAGTTATTCAAATTTACCTGATATTTCGAATTTT
GAGACGAAAGAAAGGGCTTTTTTTCGTTCGAAAACCAGAACTTTCTTCGA
TCAAACTATAATCTGAAAACATCCTTAGCAAGACAGGTTTGGCTCTGAAG
TATGAGTTCGTAAGATTTCTTTCGATATTACGCTAATTTTTACGCGTTGA
TTTTTTTATCTTCGCTGGAATAAGATTGTCCTGCAGTGAACTTGTGAATT
ATAGTTATACATCAGTTCTTTTCGCCACAAATTCTTCTTTTTATAAGCGA
CCACGTTTCTAAGACTCGAGCTTTTGTACTTTTCCGTTTAAGCAAGCTTT
TCAAATAGTCTATTATTATGACAAATGATAGAACTTGACCCAATAGGCAT
AAATATTGTATAAATAAAAGGAGTGGTTCAAGCAAGTTTCTCCGAAATTG
AGCTGGATTGTTAAGGACTCCAATCATGAGTCATCAAAGTCGAATCTGCT
TATAAAGAAAAAAATGTGTATTCTCAAATATTATTATTTTTTAGAAAATC
AAAAAATCAACAAAGACTATGAGAGGTCATGTGACTCCAATCACAAACTA
TTCAGTACCCCTGACCGTCTTTGGATCCTTTTGGATCAACCACAAACGAC
AAATCAGAGGTCACACCACAAGCTATAAGATGAACATCGATTTCCAAGCA
TTACCGAATTCTAATGAACTTACTGCCAAAGTCCATTTTCGATCTCGTGA
AGGTGAGCCAAGGGTGATGTCAACCTTTTTTGTATCTTACTATCATTTCA
TAATCCAAGCGAATAAATTTGATGAAGCATTTTCTGTTATATTAGGGAGT
GTAAGGGGGTCATGAACATTAGGTTTTTGAGTCAAAGTTAGAAAATTTCA
AGGTACTTGCGACCCTTTTAGCGACTAGTTTTTGCTCAAAATTACCAGAT
TTTAAGACCTTTTGAAGGAGTTCGATATTTCGTAATTTTGGGACCCTTTC
ATAGATTTGTAATTTATCGTTTTTGTACCCCTTTGAGAGACTGCTTATGT
CAATATTTTCGTCATCTTTCGTGACTTCATCAGCATCTGCATTGCACTTT
TTATACTTTAGTGTTATGTGACGAATATGCTGAATCTCATAATGGCTCGT
ACCCAACCTCGTGTTGTAAGTACAGTCTTTCTCTATCTCGAACCTCTGGA
ATTCGAATTTCTCTATAATTCGAACAAAGACTTTGGTTCCTATGGCATGA
AAGTAGCTTAATACTACTCAAATCTTCCCTATTTCGAATAATTTCTTGGT
CACTTTGAAGATCGAATTAAAAAGAGTTAATTGAGAGATTTTAATTTTTT
AAATTTCCAGTATTCTGGCAAACCCAGTGTTTACTTAGTGCCAGACCTGT
CTCATCTGATACTTATTAGAAAGGCAGTAACCTTTCTAGATGCCTTTCGA
CCTAACAAACTCACATATGTACGCAAAATGATAACAAAACAGATCTAAGC
GCTGCACAAAAACGCCTATTCACAACGCCCGAAAATCGGAGTGCTTTTTC
AACCCAGTTTTATTCTCAAATATTTGACCTGTGTGATCAGTATCAATTTC
CGATCAATTGATATAATGATAAGCTCACATTCAAAGTGAGAGATTTTCAA
CTTTTGCCTTGGTGAGTTTTTGGAGGCCATATTGTCAAAAGTCCATCACT
ATGGATTTCCTCCCGTGACAAATAACGACACCTTGATTTTCTGACTCCCT
AAGGGTCATATAAACATATGATCAGAAGAGAAGATAACAATACGCGGATG
TGCATACGGGAAGTAACTGAGCCCCCGGAGTACAGAGAGAAGTCGGTAAT
TGGCTCTCAAATTTTAAATCTCTATAAAGTGTTAAAAAGGCTTGAACCGC
GATATCATACAAGTCCTTTAAGTTGTTTGATATGTACAAAACTCGATCAA
CTTTTTGATCGAGCTAGTTTAATTTTTATATCCACAGATCCATTCAAGAA
TTTAAGAATAACTGGTATGTGCCGAAGATATAATTACAACACAATTGGTT
TGTTTGATTTTATCTACACCAACAAAAGCAATTTGTACCTCCATTGGGAA
GCGAATCGAAATGTGACACTTGTAGGCAAAGCGGATAGTGGTCAAATGAA
TATGACTCATTTCAGATTAAAAACTGAAACTTGGATAAAGCATATATTAC
CATGGGTAAGTTCGAACTTTTCTCAAACTCGAACCAAGTCCCTTAAGTCG
CCCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGA
CGTTGTGTACGTTAGATGAACGTAAAAACAACGTTGTGTGCCAGCTGGGG
CTTCTTTGTGATCTCTTTTGTCGAGCACTTTCCAAAATCCTGTCGTTAAT
ATACACTTCTTTTGAGCTATATAAGCTACGGGAAAATAATGCATTAAAGT
TTGGTACTTGCTTCAACTCGACTTATCAAAAGCGTGTCTTAAATACTTTT
TGACGACTCTTTCAATTATTTCAGAGTCATGGAAAATTTAAATTGATTCC
CAGGAAAGACATTGGTGGTGAACCTCCTTTCGGATACATTGAGGTGAGAA
TGTTCGATCATCATTAGCCAATTTCATAGGATTATCAATTACATGATAAC
ACCCCTGTCTCAAAGCCCCGGTGGAAATTTTTCCCACAGTGGGGATAAAA
ACTTCTATCTAAATCCCAATTGGGATAAAAATTCTATTGTCCCCGAGCTT
AAAATATCCAGTGATATGATGGTTTTGGGCAGCAAATTTTTGTATTGAAT
TTCGAATGGGGCTGAAATTGTGGCAATATTTGTCAGTGTGGCTGTGGTCC
CAGCGGGTCTGTGACACAGGGGTGTATGACATTTTTCTACGTCATTGCAG
TAATCAATTTTTTATTGTTGAGCACTCTTTTGCAAATTTAGATTATAATT
GGCACAAAAATAAATTCCCTGTAAGATTTTAAGAACCGCAACTTTAGTTT
AGGGTGATGATCCAAAAGCTTGTGCTGAAATCGAAACATCCGGTTATATA
AAGTCGAAAATCTGAAAATGTTGCTCTCGCCCGAACTTTAAATTCTGTGA
AGCGCTAAAATACCAAGAATCGCCAACATATTCTGACCACCATGATATAT
AATTCAAACCAATGTTCATATGACGTCTCTTTTCCGTTCACAGCGGATGA
AACACCTACTGTTGAGGATATTTTTATTTGATTATTTTCAGCGAGGACAA
AAATTAGAGTAAAATTTTCTTCTAGGAACGATATTTTGACCAATATTTCT
AGTAGGAGGTAGTCCAACCGGGTCTGTGAGGAGGGGGTGTTCTAATATTT
GAAAAAAATATTTTTGTTTTTCTAGCTGATCAATTTTCAAAATGGTGACG
AAGACAAGATACTACTTACGACACATGTGGTACCTGAAAATTGCACACGA
CCAACAACCACACCCACAACCACACCCACAACCACACCCATCACTTCAAA
ACAAATCAGTACTACTACTTTGATTTTGATCATTGTCACACTTTGCACAA
TCATAATTCTTATTTCACTAACCATGATTTTAGCTTGTCGGCGAATGAGA
CGAATTCTGAAGAAATCCATTCAACTACATTTTGGAAAAAATCTTGATCC
ATCTTTTGAAAAAGAAATGGAAAATTATGGTGATTAATTACATAAACCTT
TTAAACCATTTCCCCCATCATTTCATGATATGCCTCCCTTATAAGCTAAG
AAATCATTTCTCTGACTCCCAAGTCTCCCAAGTGTGTAACAGTAATAACC
CAATAATTAATCAATTTTCAATCCTTTACCAATTCCTAATTCACAGAAAA
ATCTGAATGTTATCTTTTTCATTGAATCTGTACTAAGTTTGTTATTTGTG
ATTTGATTGGCACAACTTTATTCATCCAAGATCTTGGATGATGACTGCCA
TAGCTATATCTGTATTCTCTGAGTGCATGTTGAATAGAATTGGGTTTGTC
TTCACGGTGACATTTCATAAAGTATTTAAAATAGAAAGTGTATATTCTTC
TCTTTCCAGAAACAATGGAGATGGTTGAAGAAATTCCTTCAGTGATGCTG
GTCCACCCACATGGTTGCATTGAAATGGAGAATCTTGCTGTTTTCTTGGC
ATCCCAACTTAATACATTCGGTGTTCACGTTTATTCCGACATCTTACAAA
CGCAGAAAATTGCTAATGAAGGGTTGTGTCAGGTTTTGATGGAGAATTTT
CAAATAGCAGACTATGTTGCTATACTTTGCATGGAAGGTATGCTGTGCTA
ACAATGTTCTTTCAACGTATTATCTGGACGTTCGATTGACGTTGTTTGAA
TATCTTGTATTATTAGCCAAAATATTCTGCAAAATAACTTTCATTCAAAC
TTTGGGAGCATGAGTAAGGCACTAGTCACTTCTCATAGTTTCTGATTGAT
TGATTAAAATCATTAAAGATATTTTGGAATCTAGTCCCTACACCTTCCGC
GTCTAGTTTTAAAAATCTTGTCTCCGTCCTAAAAAATCAGTCACTTTTCC
AAAAAATTAATTCGACCTTTAAATGATTTATTTATTTCAGTATATAATCT
GCCGTGCCATCAACCATATCAATTCGTATTAAATCAGCTCGTATCAAATG
AATTTGTTTACAAGAAATCATCCACAAACAACAAAAACACAGACCAGAAT
GTTAACCGGTTTATCGCTTTACATTGTACAAACACAGAAGCCATTCCTTC
ATACCTCGTTCCAAGATCTTACAGCATTCCACGACAATTTTCAGGATTTG
TTCAAAACATCTTCGGTATCAAAACGTATTTCTCGTATTTCTATGATAAG
ATTTTCGAACAGAACGTACCCGAATTTAAAGAGCGTAAAGAACACCTTCA
GATGTTGGCAGAGAAAATAAAGACACAAATTCACGTCAATTGCTATGCAT
CCACGTGCTCAAAGGTAAAAAATTTATGAAGTTTGAGTACTAATCTTATA
CAAAAATACTCTGTCCTAGCGCCATCTTTACGAGTAGATCGTATTTCGAT
ACCGGCAATTTGTTCACCTAAGACCATTCGCTCGTCTCCTCATTTACTAC
CATGTCAGATGTTTGTTCTGACTAAACAAATTGCCGGTCCCAAACTGTAA
TGTACTACTGTAGTCTACTCAGCAAAAAAGGTGCATCTATTTTGCTTCAG
GGGCCGCCATGGCTTGAAAAAGAAAGCGTAGCCCTATCTAGTGTTTCAAA
TAAGCTATCTGTGTATTCCAGTGTATCTAATTTTCAAATTTCATCAAATT
TCCCGAATCTGTGCGAAAAAATAGAGCTCATCCCCATCCCCGCCACCTCT
AGCTACCTTCCTGTTTCATTTTCTGAATTAATTAAAATTACATTCTTTTT
AGGGGACTTTATGTGAAGACGTTGTACCAATCGACCATTCGAATCTCGAT
GATGGTGAAGAGGATGTTATTCCAACGGGAGAAGAAAACGAAGAGTTAGA
AGATTCAAAAGAGACAGATTCTTTGTTTAGTTATGCGTCGACCAATGAGG
ATACGACGACAAATATTAACGATGATAACAAACACGATACTAATACCACC
CAAAATAATAATTATGAACAGAATGTTTCAGAAAAGAAAGCAAAAGAACG
GAAAGTAACATTTGCTGATGAGCTTGACGACGAAGCTTCNCCAAAATAAT
AATTATGAACAGAATGTTTCAGAAAAGAAAGCAAAAGAACGAAAAGTAAC
ATTTGCTGATGAGCTTGACGACGAAGCTTCACAATCTTAATGATCAGATA
TTGGGGCAACATTCACTTTTTTCAATACGTTCTTCTTTCTCGGTTTTTTT
TCCACCGAGAACAAATCTT

Coding sequence (CDS) from alignment at sc0000012:258311..268179-

>TCONS_00001930 ID=TCONS_00001930|Name=TCONS_00001930|organism=Clytia hemisphaerica|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000012:258311..268179- (Clytia hemisphaerica)
GTAGTTTCTTGTTGTTTCTTTCAATCAATTGTTGTTTCGAACCAGCTCGG
TAAAACGCAACCGATAACAGCTATCATTGACAATGCTGAACAAATTCAAG
AATCGTACGAAATTATCCAAGTGACCAATACAACTAAAGAACTTCCTACA
TTTTTCTGTCATTCAAACATCTTATCAAAGAATATTTCCTGGAAACCTTG
CAACAAAGTTGCTTTGGAAGAGCAATCTCATAAAATAAAAGAAGTTGGAC
CAGGACTTTATCTAGAGTTTAAGAAACATGCGAGTCCAGGAAGATATTGT
TTTGAATGTGAAGTAAATAAGGATGGTGTTGTGGCTACTAAAAACATAAG
CGTTCTATTAAAAGATTCATTCTGTGGCACTCCAACAAGAGAACAGGCGT
TGAAACATTTTCATGCTCGAAAGAAAGGTCAAGTATTCAAGCAATACATC
CAATGTCCAAGAATGAACATTGAGAATCTTCATCTCCGTGACTTCATGGA
TAAATATGGTCGAACTAATTTCATGTTATCCTGGACAAAGATAGACAAAT
TTCATGATGAGAATCAATTGTATGGTTTCAAGTTGACCATCGACCTTGAT
GGCCATGGCTTTTCGTTCTCTATGTACACAAAATATGGTTTTAACAAGCA
ACTGAAAATCAAAAAATCAACAAAGACTATGAGAGGTCATGTGACTCCAA
TCACAAACTATTCAGTACCCCTGACCGTCTTTGGATCCTTTTGGATCAAC
CACAAACGACAAATCAGAGGTCACACCACAAGCTATAAGATGAACATCGA
TTTCCAAGCATTACCGAATTCTAATGAACTTACTGCCAAAGTCCATTTTC
GATCTCGTGAAGTGTTATGTGACGAATATGCTGAATCTCATAATGGCTCG
TACCCAACCTCGTGTTATCCATTCAAGAATTTAAGAATAACTGGTATGTG
CCGAAGATATAATTACAACACAATTGGTTTGTTTGATTTTATCTACACCA
ACAAAAGCAATTTGTACCTCCATTGGGAAGCGAATCGAAATGTGACACTT
GTAGGCAAAGCGGATAGTGGTCAAATGAATATGACTCATTTCAGATTAAA
AACTGAAACTTGGATAAAGCATATATTACCATGGAGTCATGGAAAATTTA
AATTGATTCCCAGGAAAGACATTGGTGGTGAACCTCCTTTCGGATACATT
GAGCTGATCAATTTTCAAAATGGTGACGAAGACAAGATACTACTTACGAC
ACATGTGGTACCTGAAAATTGCACACGACCAACAACCACACCCACAACCA
CACCCACAACCACACCCATCACTTCAAAACAAATCAGTACTACTACTTTG
ATTTTGATCATTGTCACACTTTGCACAATCATAATTCTTATTTCACTAAC
CATGATTTTAGCTTGTCGGCGAATGAGACGAATTCTGAAGAAATCCATTC
AACTACATTTTGGAAAAAATCTTGATCCATCTTTTGAAAAAGAAATGGAA
AATTATGAAACAATGGAGATGGTTGAAGAAATTCCTTCAGTGATGCTGGT
CCACCCACATGGTTGCATTGAAATGGAGAATCTTGCTGTTTTCTTGGCAT
CCCAACTTAATACATTCGGTGTTCACGTTTATTCCGACATCTTACAAACG
CAGAAAATTGCTAATGAAGGGTTGTGTCAGGTTTTGATGGAGAATTTTCA
AATAGCAGACTATGTTGCTATACTTTGCATGGAAGTATATAATCTGCCGT
GCCATCAACCATATCAATTCGTATTAAATCAGCTCGTATCAAATGAATTT
GTTTACAAGAAATCATCCACAAACAACAAAAACACAGACCAGAATGTTAA
CCGGTTTATCGCTTTACATTGTACAAACACAGAAGCCATTCCTTCATACC
TCGTTCCAAGATCTTACAGCATTCCACGACAATTTTCAGGATTTGTTCAA
AACATCTTCGGTATCAAAACGTATTTCTCGTATTTCTATGATAAGATTTT
CGAACAGAACGTACCCGAATTTAAAGAGCGTAAAGAACACCTTCAGATGT
TGGCAGAGAAAATAAAGACACAAATTCACGTCAATTGCTATGCATCCACG
TGCTCAAAGGGGACTTTATGTGAAGACGTTGTACCAATCGACCATTCGAA
TCTCGATGATGGTGAAGAGGATGTTATTCCAACGGGAGAAGAAAACGAAG
AGTTAGAAGATTCAAAAGAGACAGATTCTTTGTTTAGTTATGCGTCGACC
AATGAGGATACGACGACAAATATTAACGATGATAACAAACACGATACTAA
TACCACCCAAAATAATAATTATGAACAGAATGTTTCAGAAAAGAAAGCAA
AAGAACGGAAAGTAACATTTGCTGATGAGCTTGACGACGAAGCTTCNCCA
AAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000996XLOC_000996Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001930-exon-sc0000012-1575043694:268122..268179TCONS_00001930-exon-sc0000012-1575043694:268122..268179Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:267283..267589TCONS_00001930-exon-sc0000012-1575043694:267283..267589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:266779..266829TCONS_00001930-exon-sc0000012-1575043694:266779..266829Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:266191..266331TCONS_00001930-exon-sc0000012-1575043694:266191..266331Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:264728..264825TCONS_00001930-exon-sc0000012-1575043694:264728..264825Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:263428..263635TCONS_00001930-exon-sc0000012-1575043694:263428..263635Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:263015..263068TCONS_00001930-exon-sc0000012-1575043694:263015..263068Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:261975..262192TCONS_00001930-exon-sc0000012-1575043694:261975..262192Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:261587..261655TCONS_00001930-exon-sc0000012-1575043694:261587..261655Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:260501..260804TCONS_00001930-exon-sc0000012-1575043694:260501..260804Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:259893..260120TCONS_00001930-exon-sc0000012-1575043694:259893..260120Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:259216..259589TCONS_00001930-exon-sc0000012-1575043694:259216..259589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1575043694:258311..258777TCONS_00001930-exon-sc0000012-1575043694:258311..258777Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:268122..268179TCONS_00001930-exon-sc0000012-1510915933:268122..268179Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:267283..267589TCONS_00001930-exon-sc0000012-1510915933:267283..267589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:266779..266829TCONS_00001930-exon-sc0000012-1510915933:266779..266829Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:266191..266331TCONS_00001930-exon-sc0000012-1510915933:266191..266331Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:264728..264825TCONS_00001930-exon-sc0000012-1510915933:264728..264825Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:263428..263635TCONS_00001930-exon-sc0000012-1510915933:263428..263635Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:263015..263068TCONS_00001930-exon-sc0000012-1510915933:263015..263068Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:261975..262192TCONS_00001930-exon-sc0000012-1510915933:261975..262192Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:261587..261655TCONS_00001930-exon-sc0000012-1510915933:261587..261655Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:260501..260804TCONS_00001930-exon-sc0000012-1510915933:260501..260804Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:259893..260120TCONS_00001930-exon-sc0000012-1510915933:259893..260120Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:259216..259589TCONS_00001930-exon-sc0000012-1510915933:259216..259589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1510915933:258311..258777TCONS_00001930-exon-sc0000012-1510915933:258311..258777Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:268122..268179TCONS_00001930-exon-sc0000012-1491911889:268122..268179Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:267283..267589TCONS_00001930-exon-sc0000012-1491911889:267283..267589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:266779..266829TCONS_00001930-exon-sc0000012-1491911889:266779..266829Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:266191..266331TCONS_00001930-exon-sc0000012-1491911889:266191..266331Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:264728..264825TCONS_00001930-exon-sc0000012-1491911889:264728..264825Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:263428..263635TCONS_00001930-exon-sc0000012-1491911889:263428..263635Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:263015..263068TCONS_00001930-exon-sc0000012-1491911889:263015..263068Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:261975..262192TCONS_00001930-exon-sc0000012-1491911889:261975..262192Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:261587..261655TCONS_00001930-exon-sc0000012-1491911889:261587..261655Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:260501..260804TCONS_00001930-exon-sc0000012-1491911889:260501..260804Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:259893..260120TCONS_00001930-exon-sc0000012-1491911889:259893..260120Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:259216..259589TCONS_00001930-exon-sc0000012-1491911889:259216..259589Clytia hemisphaericaexon
TCONS_00001930-exon-sc0000012-1491911889:258311..258777TCONS_00001930-exon-sc0000012-1491911889:258311..258777Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001930-proteinTCONS_00001930-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:258311..268179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0149822	0.0292199	0	0	0	0	0.0577858	0.0180328	0	0	0.0758947	0.0997803	2.88961	4.10811	5.51277	3.23191	0.269929	0.207501	1.62449	1.76657	0.101399	0.0847868	0	0.0780876	0.0160857	0.0143561	0.0205435	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013568SEFIR_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001930 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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