TCONS_00002738 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002738
Unique NameTCONS_00002738
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2753

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002738 ID=TCONS_00002738|Name=TCONS_00002738|organism=Clytia hemisphaerica|type=transcript|length=2753bp
AGTACAAGGTCATGTTGTACTGAATTATAAATTGTTAAAACCTACGGATC
GCAATAAATAAAGATGATGGAATATCAGCATGTATACCACGAGGAAGCTG
AGATGCAATCAGTTGAAGATTTGGCGTTTGGTCTTGATCGAACCAAAGAT
ATGAACATTGTCTTGATCGGACGAAGCGGCGTTGGCAAATCAAGCTGgat
caattcttttttcaattatCTTCTACATCCATCGTTTGATTCAGCAGTGA
GAGAGGGTCCAGTCTATGCACCAGTTTATTCTAGGTTTAAACATTATCAC
GAAGAGGCTGATGACGTGGTCAATACAGAGGacgatgatgacgatgatga
tgatggttTCGGTTGTTTGGTCGATATCGAAATCGGTGACAAACATCAAG
AGAATGTTAACCAAGAATATCGAGAAGGAAACACTGGTGTATCAGCAACA
ATGCTTCCGATGGCTCATCGATTAGAGCCTAAGGATGAAAAGTACAGTAT
TACTTTGATTGATACGCCTGGCTTCTGTTCTACCGCCCCTGGTGGCGATA
CCACCCTTTCAGAAGCtcaagataaaaagaatatCAATCTCATTCTTAAC
CAACTTGGTCAATACCCTCACATTAATGCATTTGTCATCCTATTGAAACC
AGGACAAGAGAAGCTTGATCCAGGATTTGCTACATCTCTTAAGACTCTAT
TCAGCCAACTTGACGAATCAGCAAAAAGCAATGTCATCTTTTCATTTACT
CACTCGAACAATTGCGACTTCAATGACATCCAACACCTTCCAGCACTGAA
AAACTTCTTAAAGAGCAAGGCGAATCTTCGAATTAAACGTAGTAATGTGT
TCTATTTCGATAACTCACCCTTCTGCTATCTTGCAACTGCCGCCAATAAC
TACCAACCAACCGACAGCCGAAGCAAAATGCAAGACTGCTGGGACAAATC
CGTTAAAAACTGTCTTAATATGCTTGGCCATATCAACCAATTACCAGCTC
ACAAAACCGACACTATAATAGCCATTAACGACAGTAAATCCATCATCAAA
ATGATGATTGCACCTCTCGTTTACGTCTGCAAAATCAATGAAGAAAATTA
CGCCCTCGTCAACCAAACCTATGATAATCTGGCTAAGCAGACAGGAAGGA
GTGTCATCAAAGTCAAAGACGATCCTAAGAAGGACCAAGGAGGAGCTGAT
GAAGAAATAAAAGATGAAAATGCTAATTTGAATCTTGAAGGAGCAAAAGC
TATAGAGGAGGAAGAGGAGCCTCTTACTCAAGAAACAAATATAGATGAAG
CAGACAGAGAAGAGAATGGTGAAGGAGCGGAGGACCAAGAAGTAGAGGGT
CGAAAAGAAGGTTGTGGAGGAGCACTTGATGGTATTGATCTTATTGAAAT
CAACGAGAAGGTTCTAATCTACAAGAAGCTAAGAACGCCGATCACAGTGT
GCAACAATCCAGCTTGCTTTAAGAAGCAAAGTATCTTCGAGGAGGGGAAA
GAAATTGTCAAGAAGATGTACCACAACGTGTGCTGCCATAATTGTCTGGT
CCCCTTTGTTTCACACGACAAGCCTGGCTCGTTGATGTTGCTTCTATGCA
AGGCTTTTGACTGGTCACTGAAATGTCGAATATGTGATCATTCTAAGGAT
GAACATATACACATTGCTTACGAGTTGAACGAAGCTCATAAAGTCTTTGC
ATTGGAGATCAAGGATATCAATCAACGAAAGAAAGATCTTGAGCTTGAAT
TTGAAGTCATCATCGATATCCTTGTATTCTTTGCACAGTTCTTGAACCAT
CATTGTCTGTTGAAAGAGGAAATGCTGGTCAAGCAATGCATTGATAGAGA
ACTGGTGAAAGTCAGTCAAGATCTTGGTGATTTGGTACGCCTCCAAGATG
AGCGCCAAGAGAAAGTTAAAGAGCTTTCCGAGAATGACCTAGTCAAATTG
CAAGGCATCATCAAgcaaaacaaagacaaactAAAAGCCATAGACGAAAA
GGTATCATTGGTTACGAAGATGGGAAAACTTAAAGTTGAAACGTTGGGGG
AGATTGATGAATTCGAGAAGACTGCCATGGTAAGTGAGCTGCATGATCTG
GCATCTAAACGAAAATGTTTGCTCAGTTCCAGTGAGAAGAGTCTCGATCA
GGAGGAGCTTTGTCAGGTTTACGACAAACGTCGAAGCAAATACGTTAGTC
TATTGCAAAAGCTTAGAGAAGATGAAAATCTTCTGTTACAGTTGATTGAA
TTAAACGAAAGCTGTGACAAGATGAAAATGTTAGCTAAAGGTTTGAAAAA
GATACAACAAAAATATGCTGATAGAATGCAGAATCAAAAGCACAGTTTGG
TACCCGAAAGCGTTAATGCCAAAATAATAATGCTGACAAAGTTACCACAT
AATGGCCATATCTTTAAGGAAATTcatgaagaattgaaaaagtcTAAGAC
CGAAGGACTCATCCAAGACAAAGTGTATAAGATGGGGGAGCAGTTGTCAA
ATTTACCCCGACGCGCATATCAAAAGATCAAGAAAGCTGCAGAAAATGTA
TACCATTCATTACAGAGATAAAACGAAACTAAGTGTGATTTTCAACAGAT
TGATGAAACGTTAGAAACACAGATTTTTTCCCCGAACTTTCTATTCTTGT
ATCTTGTAAAGGAACACCtagttttttatattaaaaCTTTCTTGAATTTA
GAACCTTTTTTGAAGACGAAAAGGATAAGGAAAGAGATACGGCTATAGTT
TTT
Run BLAST on NCBI

protein sequence of TCONS_00002738-protein

>TCONS_00002738-protein ID=TCONS_00002738-protein|Name=TCONS_00002738-protein|organism=Clytia hemisphaerica|type=polypeptide|length=835bp
MMEYQHVYHEEAEMQSVEDLAFGLDRTKDMNIVLIGRSGVGKSSWINSFF
NYLLHPSFDSAVREGPVYAPVYSRFKHYHEEADDVVNTEDDDDDDDDGFG
CLVDIEIGDKHQENVNQEYREGNTGVSATMLPMAHRLEPKDEKYSITLID
TPGFCSTAPGGDTTLSEAQDKKNINLILNQLGQYPHINAFVILLKPGQEK
LDPGFATSLKTLFSQLDESAKSNVIFSFTHSNNCDFNDIQHLPALKNFLK
SKANLRIKRSNVFYFDNSPFCYLATAANNYQPTDSRSKMQDCWDKSVKNC
LNMLGHINQLPAHKTDTIIAINDSKSIIKMMIAPLVYVCKINEENYALVN
QTYDNLAKQTGRSVIKVKDDPKKDQGGADEEIKDENANLNLEGAKAIEEE
EEPLTQETNIDEADREENGEGAEDQEVEGRKEGCGGALDGIDLIEINEKV
LIYKKLRTPITVCNNPACFKKQSIFEEGKEIVKKMYHNVCCHNCLVPFVS
HDKPGSLMLLLCKAFDWSLKCRICDHSKDEHIHIAYELNEAHKVFALEIK
DINQRKKDLELEFEVIIDILVFFAQFLNHHCLLKEEMLVKQCIDRELVKV
SQDLGDLVRLQDERQEKVKELSENDLVKLQGIIKQNKDKLKAIDEKVSLV
TKMGKLKVETLGEIDEFEKTAMVSELHDLASKRKCLLSSSEKSLDQEELC
QVYDKRRSKYVSLLQKLREDENLLLQLIELNESCDKMKMLAKGLKKIQQK
YADRMQNQKHSLVPESVNAKIIMLTKLPHNGHIFKEIHEELKKSKTEGLI
QDKVYKMGEQLSNLPRRAYQKIKKAAENVYHSLQR
Run BLAST on NCBI

transcript from alignment at sc0000021:878515..884777-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002738 ID=TCONS_00002738|Name=TCONS_00002738|organism=Clytia hemisphaerica|type=transcript|length=6263bp|location=Sequence derived from alignment at sc0000021:878515..884777- (Clytia hemisphaerica)
AGTACAAGGTCATGTTGTACTGAATTATAAATTGTTAAAACCTACGGATC GCAATAAATAAAGATGATGGAATATCAGCATGTATACCACGAGGAAGGTA ANCATTGGTTGCCAAACCGTTGATTAAAAATTGTTAAAACCTACGGTTCA CAATAAACAAAAATGATGGAATTTCAGCATGTATACCATGAGGAAGGTAA GATGGTGTCTCAAATTGATTCTTTGTAGAATTATCTTTTCTTTTAGATAG TGTTGTGAATACTTTCCTTTTTTTTGGGGGGGGGGACGGGGTGATTTAAT AAACATTGGTAATTTTTTTGTAGTTTTTTTAAATTATTCTCCTTTGGCTT GAGTATGATATGCATATCGGGAGGCAGTACTAGCTTTGTGAAATTACGGG TGTGTCCGAGTCAAAATTCTAAAATCGAGCCTTAGAGAGACTGACTTTTG AAAATAATTGTCCATTTTTTGACGTTCTTGCCACCCGTAAAGAGACGATT TCGCCAAAATTTATGACCCTCGGAGGGAGTCGATTTTCGAATTTGGTAAT TTTGGAACCCTTACAAAGACTCAATTGCTGCTTTTTAATGATTTTGTATC CCTTTGAGGGACTTTCAAGGATGTGAAAAAGGAATCCTTATGGCTCCGAC TAACCCGGTATCATCCATTTGCCTAAGTACCCCCACCCGGATGCATAATC ACTCTTTTAAAACACATTTATTGGAAGAATCCTTGACTTTTAGCTCTCAG CTTTCATAAATATCAATTTTACTAAGCAGATATTCAATAGGTAAAAGTTA CGTTGGTTATTGAGATCTATTAACCCGAGGTGATGTAATATACATCACCG AGGGTTAATAAAACCAATAACCAACTAAAACTTATTGAATATATGTTTTA TTATATACCTTAAGCCAAAAACAAAACACGAGTTATGTAAATAGTCGAAC GATTCGCATAAAACACTCCCGTAATCGAAAGTTCGAATGTTTTTCTTATT TATTGATTTTCTTAAATTACTGTGAGTCATAAGATTTGTTCATGAAATTA ACAATAGATTTATTTTAATGAATTTCTTTGATAACAACAAGAGCGACAAA AAAATCAAACTTTGAAAGCAAGATTTAAAAAAAAATTCCACCGTGGTATA ATAGCCATGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCTACAGGT ATATAATAATATTATTTATTTCAGCTGAGATGCAATCAGTTGAAGATTTG GCGTTTGGTCTTGATCGAACCAAAGATATGAACATTGTCTTGATCGGACG AAGCGGCGTTGGCAAATCAAGCTGGATCAATTCTTTTTTCAATTATCTTC TACATCCATCGTTTGATTCAGCAGTGAGAGAGGGTCCAGTCTATGCACCA GTTTATTCTAGGTTGGTTAATACTATTTTCATAACAATTTTATAAGAGCA AGGGGGAGGGCAAAATATTCCTGAAATAAGAATAGTTTAAGAATATCCCT GAGATTGCAATGGTTGAATTTTAATAAAGTGAAGTGTCGAATAGTGAAAA TTGGCACTAGAAGGTAGAGAAAGTACTTCAACATCATTAAAACAAATTAA TAGTCCATTTTCAACTACAATCCATAGATTCTTTTTTCAAGTACATTTGA GAACTTCTCAGGATTGTCATATACGATCTTAAATTTCATATTAAGAAATC TTCAATCTTAGAGGGTTATCACTGTGAAAAATGTTCAAAAGATATTTATT CAATCAAAAAATATAAAATATCTTAAATCTACTGCCTGGTGGACTAAAAA TTTGGCTCCTTTTTGTTGTTTTGTGGTGATTTTTAAAGTCAATTAGTGAT ATACTTGGGATATCTTTTGAAATAATATATTTGAACAATTTCTTCAGCAG AGATGACATTCTAAGATCAAAGAACCACTGTTATGAAAATGGAAATTACA GGAGAGTTATTCACGAAGTTAATTTTTTTCTTCTCCATTTTTTATTTTCA TTTTACAAACTTTTTAAGCTTTTTCTATTGGTAATATTCCACTCTTGAAT ATCTTTTCAACAAGCACAAAACCACTATTCATTTCAAATTCTCTAAAAAA TCACAGCTTTTTTTGTCTCCGGTGTATATTATATTGAGACAGATATTACA ACGGCAGGTTTTTTGGCATGAAAACTTTTACCTGGCCTAATTCGCGAGTC CCCTCTCCAATAAGTTACAAAATGCTATCTACTTTCGAACTAATCACACG CGCTTACGTCCCACTTAAGATACTACGGAACCTAAATGTTTTCCCACTTA GTATTATGTAGAACAGAATATATAAAAATAAGGCGTCGGTGACCAAAATA CAAAGAACACGTTCAGAACATTTTAAGGCTTTGAGGCTTAAAATTTGGAC AAAAATCGAGTGAAAATCGACAAACATTGTGACATACCCGTCACCTCGCA AATCTAGTACCCCCGGACTAGAGCTTGATAATAGTGCCAAGTTTTAAATT TTGTTCTAGGTTTAAACATTATCACGAAGAGGCTGATGACGTGGTCAATA CAGAGGACGATGATGACGATGATGATGATGGTTTCGGTTGTTTGGTCGAT ATCGAAATCGGTGACAAACATCAAGAGAATGTTAACCAAGAATATCGAGA AGGAAACACTGGTGTATCAGCAACAATGCTTCCGATGGCTCATCGATTAG AGCCTAAGGATGAAAAGTACAGTATTACTTTGATTGATACGCCTGGCTTC TGTTCTACCGCCCCTGGTGGCGATACCACCCTTTCAGAAGCTCAAGATAA AAAGAATATCAATCTCATTCTTAACCAACTTGGTCAATACCCTCACATTA ATGCATTTATCATCCTATTGAGNTATCAATCTTATTCTAAATCAACTTGG TCAATACCCTCACATTAATGCATTTGTCATCCTATTGAAACCAGGACAAG AGAAGCTTGATCCAGGATTTGCTACATCTCTTAAGACTCTATTCAGCCAA CTTGACGAATCAGCAAAAAGCAATGTCATCTTTTCATTTACTCACTCGAA CAATTGCGACTTCAATGACATCCAACACCTTCCAGCACTGAAAAACTTCT TAAAGAGCAAGGTNAAATCGGTGACAAACATCAAGAGAATATTAACCAAG AATATCGAGAAGGAAACACTGGTGTATCAGCAACAATGTTTCCAATGGCT CATCGATTAGAGCCTAAGGATGAAAAGTACAGTATCACTTTGATTGATAC GCCTGGCTTCTGTTCTACCGCCCCTGGTGGCGACACCACCCTCTCAGAAG CTCAAGATAAACAGAATATCAATCTTATTCTAAATCAACTTGGTCAATAC CCTCACATTAATGCATTTGTCATCCTATTGAAACCAGGACAAGAGAAGCT TGATCCAGGATTTGCTACATCTCTTAAGACTCTATTCAGCCAACTTGACG AATCAGCAAAAAGCAATGTCATCTTTTCATTTACTCACTCGAAAAATTGC GACTTCAATGACATCCAACACCTTCCAGCACTGAAAAACTTATTAAAGAG CAAGGCGAATCTTCGAATTAAACGTAGTAATGTGTTCTATTTCGATAACT CACCCTTCTGCTATCTTGCAACTGCCGCCAATAACTACCAACCAACCGAC AGCCGAAGCAAAATGCAAGACTGCTGGGACAAATCCGTTAAAAACTGTCT TAATATGCTTGGCCATATCAACCAATTACCAGCTCACAAAACCGACACTA TAATAGCCATTAACGACAGTAAATCCATCATCAAAATGATGATTGCACCT CTCGTTTACGTCTGCAAAATCAATGAAGAAAATTACGCCCTCGTCAACCA AACCTATGATAATCTGGCTAAGCAGACAGGAAGGAGTGTCATCAAAGTCA AAGACGATCCTAAGAAGGACCAAGGAGGAGCTGATGAAGAAATAAAAGAT GAAAATGCTAATTTGAATCTTGAAGGAGCAAAAGCTATAGAGGAGGAAGA GGAGCCTCTTACTCAAGAAACAAATATAGATGAAGCAGACAGAGAAGAGA ATGGTGAAGGAGCGGAGGACCAAGAAGTAGAGGGTCGAAAAGAAGGTTGT GGAGGAGCACTTGATGGTATTGATCTTATTGAAATCAACGAGAAGGTTCT AATCTACAAGAAGCTAAGAACGCCGATCACAGTGTGCAACAATCCAGCTT GCTTTAAGAAGCAAAGTATCTTCGAGGTAACCTTTCGCTCATAACTCTCT AAAATATGTCCATTGAGAGTCCATAATAACCGATTTTGTCTACTCAACAA AAAGCGAACGATAGTTTTTAAATCATATTTATCAATTAGTTGCTTTAAAT CTAAAGTAAGTAAGTCTGCGACCGCAGTCGCAGCCCAAAGGCTCCTCTTT CGATAGCTATCTACCCGAAGGAAGGGGAGGGCGCCACTCTTTTTCCCTGG ATTTCTCTACACACCCTTGATCCCAAGCAGAGGGGCATCAAGTACCATTT TGAGAATCTTTGGTATGACCCAGCTGGGGGTTGAACCCACAACCTTGAGA ACCGTAGCCGGATGATCTACCCACTGCACTACGGTCGCAATAAGAACGTG GTTTCTCTTAAATTTTTAATCTGCCTGCTTGACAGTGTTTCAAAAAAGGT GCAGCCCCTTGAGTTTAAAGCGCAAAAGGCTAAAGAGGAATCTTCAACCT TTCTCAAGCAATAAAAAATGATGCCTTACAAACTGTAAGGGTTTTCGTTC ATTGGTTCAAGAGATTGAACAATATTTTCGAAATCTAGCGATGGATTTTA CTTTAAATTTGGCGTATGTAAGAAAACAACGCGGGTTACGTGATTCAAAT GGGAAATAAATGGCTTTATTTCCAATCCAAGAAATTCAATTCTAAACCCT TCGGCGATTTAAACTCAATGGTATGGGCCTACTCCGCCTGATTGACACGT CACTGGTTGACGCATTGCTTTCGGGTATTATAACTTGTTTATCCCTTTTA GGAGGGGAAAGAAATTGTCAAGAAGATGTACCACAACGTGTGCTGCCATA ATTGTCTGGTCCCCTTTGTTTCACACGACAAGCCTGGCTCGTTGATGTTG CTTCTATGCAAGGCTTTTGACTGGTCACTGAAATGTCGAATATGTGATCA TTCTAAGGATGAACATATACACATTGCTTACGAGTTGAACGAAGCTCATA AAGTCTTTGCATTGGAGATCAAGGATATCAATCAACGAAAGAAAGATCTT GAGCTTGAATTTGAAGTCATCATCGATATCCTTGTATTCTTTGCACAGTT CTTGAACCATCATTGTCTGTTGAAAGAGGAAATGCTGGTCAAGCAATGCA TTGATAGAGAACTGGTGAAAGTCAGTCAAGATCTTGGTGATTTGGTACGC CTCCAAGATGAGCGCCAAGAGAAAGTTAAAGAGCTTTCCGAGAATGACCT AGTCAAATTGCAAGGCATCATCAAGCAAAACAAAGACAAACTAAAAGCCA TAGACGAAAAGGTATCATTGGTTACGAAGATGGGAAAACTTAAAGTTGAA ACGTTGGGGGAGATTGATGAATTCGAGAAGACTGCCATGGTAAGTGAGCT GCATGATCTGGCATCTAAACGAAAATGTTTGCTCAGTTCCAGTGAGAAGA GTCTCGATCAGGAGGAGCTTTGTCAGGTTTACGACAAACGTCGAAGCAAA TACGTTAGTCTATTGCAAAAGCTTAGAGAAGATGAAAATCTTCTGTTACA GTTGATTGAATTAAACGAAAGCTGTGACAAGATGAAAATGTTAGCTAAAG GTTTGAAAAAGATACAACAAAAATATGCTGATAGAATGCAGAATCAAAAG CACAGTTTGGTACCCGAAAGCGTTAATGCCAAAATAATAATGCTGACAAA GTTACCACATAATGGCCATATCTTTAAGGAAATTCATGAAGAATTGAAAA AGTCTAAGACCGAAGGACTCATCCAAGACAAAGTGTATAAGATGGGGGAG CAGTTGTCAAATTTACCCCGACGCGCATATCAAAAGATCAAGAAAGCTGC AGAAAATGTATACCATTCATTACAGAGATAAAACGAAACTAAGTGTGATT TTCAACAGATTGATGAAACGTTAGAAACACAGATTTTTTCCCCGAACTTT CTATTCTTGTATCTTGTAAAGGAACACCTAGTTTTTTATATTAAAACTTT CTTGAATTTAGAACCTTTTTTGAAGACGAAAAGGATAAGGAAAGAGATAC GGCTATAGTTTTT

Coding sequence (CDS) from alignment at sc0000021:878515..884777-

>TCONS_00002738 ID=TCONS_00002738|Name=TCONS_00002738|organism=Clytia hemisphaerica|type=CDS|length=2508bp|location=Sequence derived from alignment at sc0000021:878515..884777- (Clytia hemisphaerica)
ATGATGGAATATCAGCATGTATACCACGAGGAAGCTGAGATGCAATCAGT
TGAAGATTTGGCGTTTGGTCTTGATCGAACCAAAGATATGAACATTGTCT
TGATCGGACGAAGCGGCGTTGGCAAATCAAGCTGGATCAATTCTTTTTTC
AATTATCTTCTACATCCATCGTTTGATTCAGCAGTGAGAGAGGGTCCAGT
CTATGCACCAGTTTATTCTAGGTTTAAACATTATCACGAAGAGGCTGATG
ACGTGGTCAATACAGAGGACGATGATGACGATGATGATGATGGTTTCGGT
TGTTTGGTCGATATCGAAATCGGTGACAAACATCAAGAGAATGTTAACCA
AGAATATCGAGAAGGAAACACTGGTGTATCAGCAACAATGCTTCCGATGG
CTCATCGATTAGAGCCTAAGGATGAAAAGTACAGTATTACTTTGATTGAT
ACGCCTGGCTTCTGTTCTACCGCCCCTGGTGGCGATACCACCCTTTCAGA
AGCTCAAGATAAAAAGAATATCAATCTCATTCTTAACCAACTTGGTCAAT
ACCCTCACATTAATGCATTTGTCATCCTATTGAAACCAGGACAAGAGAAG
CTTGATCCAGGATTTGCTACATCTCTTAAGACTCTATTCAGCCAACTTGA
CGAATCAGCAAAAAGCAATGTCATCTTTTCATTTACTCACTCGAACAATT
GCGACTTCAATGACATCCAACACCTTCCAGCACTGAAAAACTTCTTAAAG
AGCAAGGCGAATCTTCGAATTAAACGTAGTAATGTGTTCTATTTCGATAA
CTCACCCTTCTGCTATCTTGCAACTGCCGCCAATAACTACCAACCAACCG
ACAGCCGAAGCAAAATGCAAGACTGCTGGGACAAATCCGTTAAAAACTGT
CTTAATATGCTTGGCCATATCAACCAATTACCAGCTCACAAAACCGACAC
TATAATAGCCATTAACGACAGTAAATCCATCATCAAAATGATGATTGCAC
CTCTCGTTTACGTCTGCAAAATCAATGAAGAAAATTACGCCCTCGTCAAC
CAAACCTATGATAATCTGGCTAAGCAGACAGGAAGGAGTGTCATCAAAGT
CAAAGACGATCCTAAGAAGGACCAAGGAGGAGCTGATGAAGAAATAAAAG
ATGAAAATGCTAATTTGAATCTTGAAGGAGCAAAAGCTATAGAGGAGGAA
GAGGAGCCTCTTACTCAAGAAACAAATATAGATGAAGCAGACAGAGAAGA
GAATGGTGAAGGAGCGGAGGACCAAGAAGTAGAGGGTCGAAAAGAAGGTT
GTGGAGGAGCACTTGATGGTATTGATCTTATTGAAATCAACGAGAAGGTT
CTAATCTACAAGAAGCTAAGAACGCCGATCACAGTGTGCAACAATCCAGC
TTGCTTTAAGAAGCAAAGTATCTTCGAGGAGGGGAAAGAAATTGTCAAGA
AGATGTACCACAACGTGTGCTGCCATAATTGTCTGGTCCCCTTTGTTTCA
CACGACAAGCCTGGCTCGTTGATGTTGCTTCTATGCAAGGCTTTTGACTG
GTCACTGAAATGTCGAATATGTGATCATTCTAAGGATGAACATATACACA
TTGCTTACGAGTTGAACGAAGCTCATAAAGTCTTTGCATTGGAGATCAAG
GATATCAATCAACGAAAGAAAGATCTTGAGCTTGAATTTGAAGTCATCAT
CGATATCCTTGTATTCTTTGCACAGTTCTTGAACCATCATTGTCTGTTGA
AAGAGGAAATGCTGGTCAAGCAATGCATTGATAGAGAACTGGTGAAAGTC
AGTCAAGATCTTGGTGATTTGGTACGCCTCCAAGATGAGCGCCAAGAGAA
AGTTAAAGAGCTTTCCGAGAATGACCTAGTCAAATTGCAAGGCATCATCA
AGCAAAACAAAGACAAACTAAAAGCCATAGACGAAAAGGTATCATTGGTT
ACGAAGATGGGAAAACTTAAAGTTGAAACGTTGGGGGAGATTGATGAATT
CGAGAAGACTGCCATGGTAAGTGAGCTGCATGATCTGGCATCTAAACGAA
AATGTTTGCTCAGTTCCAGTGAGAAGAGTCTCGATCAGGAGGAGCTTTGT
CAGGTTTACGACAAACGTCGAAGCAAATACGTTAGTCTATTGCAAAAGCT
TAGAGAAGATGAAAATCTTCTGTTACAGTTGATTGAATTAAACGAAAGCT
GTGACAAGATGAAAATGTTAGCTAAAGGTTTGAAAAAGATACAACAAAAA
TATGCTGATAGAATGCAGAATCAAAAGCACAGTTTGGTACCCGAAAGCGT
TAATGCCAAAATAATAATGCTGACAAAGTTACCACATAATGGCCATATCT
TTAAGGAAATTCATGAAGAATTGAAAAAGTCTAAGACCGAAGGACTCATC
CAAGACAAAGTGTATAAGATGGGGGAGCAGTTGTCAAATTTACCCCGACG
CGCATATCAAAAGATCAAGAAAGCTGCAGAAAATGTATACCATTCATTAC
AGAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001471XLOC_001471Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002738-proteinTCONS_00002738-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002738-exon-sc0000021-1575043694:884681..884777TCONS_00002738-exon-sc0000021-1575043694:884681..884777Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1575043694:883367..883553TCONS_00002738-exon-sc0000021-1575043694:883367..883553Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1575043694:881932..882268TCONS_00002738-exon-sc0000021-1575043694:881932..882268Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1575043694:881667..881864TCONS_00002738-exon-sc0000021-1575043694:881667..881864Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1575043694:880552..881223TCONS_00002738-exon-sc0000021-1575043694:880552..881223Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1575043694:878515..879776TCONS_00002738-exon-sc0000021-1575043694:878515..879776Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:884681..884777TCONS_00002738-exon-sc0000021-1510915933:884681..884777Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:883367..883553TCONS_00002738-exon-sc0000021-1510915933:883367..883553Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:881932..882268TCONS_00002738-exon-sc0000021-1510915933:881932..882268Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:881667..881864TCONS_00002738-exon-sc0000021-1510915933:881667..881864Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:880552..881223TCONS_00002738-exon-sc0000021-1510915933:880552..881223Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1510915933:878515..879776TCONS_00002738-exon-sc0000021-1510915933:878515..879776Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:884681..884777TCONS_00002738-exon-sc0000021-1491911889:884681..884777Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:883367..883553TCONS_00002738-exon-sc0000021-1491911889:883367..883553Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:881932..882268TCONS_00002738-exon-sc0000021-1491911889:881932..882268Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:881667..881864TCONS_00002738-exon-sc0000021-1491911889:881667..881864Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:880552..881223TCONS_00002738-exon-sc0000021-1491911889:880552..881223Clytia hemisphaericaexon
TCONS_00002738-exon-sc0000021-1491911889:878515..879776TCONS_00002738-exon-sc0000021-1491911889:878515..879776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:878515..884777 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 1.25598e-09 6.78527e-09 0 0 7.25673e-10 0 0 0 0 0 0 0 0 0 0 0 0 9.50225e-09 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002738 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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