TCONS_00003476 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003476
Unique NameTCONS_00003476
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1102

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003476 ID=TCONS_00003476|Name=TCONS_00003476|organism=Clytia hemisphaerica|type=transcript|length=1102bp
tttacaggGAAAGATATAAAAAGGAATACATACAAACGCAACAATGAAGG
GGATATCAACGGTCTTCATGCGGAACAATAACCGACAGAAACAACAAAAA
CGCGGAATCAGTAACATGCATGATCGGGACTATTATAATATCAATGGGAT
AATGagTCAACAAAGTTTATCTGACAGCTTGACAATCGAAGAAATAAACG
AATATAAACAAGCTTTCGCGTTGTACGATCGAAACTCGAATGGAACTATC
AACCAAAATGAATTACTAAGCGTCTTGAGAAGCCTGGGACAGAATCCAAC
TGAACAAGAAGTCCAAGACATTATTAATGAGATGGATGCTAACAAGAACG
GAAAGAttgaatttcaagaatttttagaGAAAATGGCAGAAcgaaatgag
agaaatgatatGAGTGAAGACCTAAGAAACGCTTTTAGAGTATTCGATGC
AAATGGTGATGGACGAATCAGCGTTGAAGAATTACGTCACGTGATGGTGA
ATTTGGGCGATCCATTAACGGATGAAGAGGTCGATGAAATGATGCGAGAA
GCAGACAAAGATAATGATGGTTATGTTGATTATGAAGAGTTTGTAACCAT
GATGACAGAatgaaaagacaaacaaaatATTGGATGACATGAATGATGGA
caagaattttaaaacaaatttcttgaGATTCGGTTGGTTACGTGTCAAGC
TAGTGAGACATTTAGAAATATTTATCCAAATNTTCTTGAGATTCGGTTGG
TTACTGTGTCAAGCTAGTGAGACATTTAGAAATATTTATCCAAATTCCAT
TGTGTATCTAATTTCCAAAGTAGTCGATTTAGTTGCCCAAAAGATCCACT
TTTTTCGGGTATGACTGAAGAAAAATGATGAACcatgacaaaaaaaacaa
ttgtAAATATTGAATTATCTCTATCTAATGATAtacttattttgaaatta
aaaagatttatCGTTGTATTGTTAATTAACGTAAACATTTATCAAGGTCA
AAAATTATTTATGTATATTTTACATATTATATATTTCCATCAAGAAAAAA
AGACATTTGAAAAGTATAAAACTTAATTTACAGTATACACTAAATTTATC
AG
Run BLAST on NCBI

transcript from alignment at sc0000028:193442..203252-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003476 ID=TCONS_00003476|Name=TCONS_00003476|organism=Clytia hemisphaerica|type=transcript|length=9811bp|location=Sequence derived from alignment at sc0000028:193442..203252- (Clytia hemisphaerica)
TTTACAGGGAAAGATATAAAAAGGAATACATACAAACGCAACAATGAAGG
GGATATCAACGGTCTTCATGCGGAACAATAACCGACAGAAACAACAAAAA
CGCGGAATCAGTAACATGCATGATCGGGACTATTATAATATCAATGGGAT
AATGGTAAGTTCTTCATAATACTCTCAAATATCTTTCCAATAGCATACCG
CGGCGAATCTAAAAATAGATTTTATTCTTGTCATTATTATTACTTTTTAT
ATGTTTGTACGGGTTTCAACCCCATCAACCTCTGCGTTAATTTCTCTTGC
ACGTTAAATGCATCCAATTACAAAAGAGATGTAACAGCCTGCACGGATTA
AAAATTAGGGCGAATTGGATTGTGGGATTGAAACCCGTACAAAAATGAAA
AGTAATAATTATGACGTTTGCGTTGCGGAGTGCTATTGAATTTTATAGAC
GCAAATGAGAAAACAGAAACCTATAACGGCCTGATGAAAGAACTTTTGTG
GGAGGCGATACCATTTTGACTCCAAAAATTACCAATAAAGCATTACGTAA
TCTTAGCAACCAATAAAGATAAAAATTAAGCGCTAAGAAATCGAATACCG
CACTTACCCATAACAATCTAAACGCTCCCTTAACAATCAAAAGCACCAAA
ATCGCAAAAAAAGAACAATATCCGATTTTTTGCGATTGTGGCTCTTTAGA
TAGTTAAAGGAGCGTTTATGGATTGTTATAGGTAAGTATGGTACGCTATC
GGTTTATCCTGACGCTAAGATTTTGTAAATGTTTGTTGAGTCACCATGTA
ATGTTTTTGCCGCTGTGGAGTAAAAATGGTATCCGTCTTGTAAAAGGGAT
ATCATCATATCCCGAAGGGCTAGACTCGAGACTCCTGGCTCCCAAACGCC
CGCGCGTGGTTTTTACACAAACGCCGGATTGAAAGTAAAATCTATCCCTA
GGTCCCTTAAAAACAAAGGGATCGCTAGATACAATCCGTCGTCACGATTG
CAGCTCGTTCTTGCATGGGAAAGGTTAGAGATTTTACCCTAGCCCTTCGG
GCTTTAAACTCAATGGGTATCACTTGTCAGTCATTTCGTTTTCCCTCCCC
AACATTTATTCAAAAAACAAAAACAGCCACAAAATTCACAAGTTATTAAA
ATGACACTTAACACCATCTTAACTTTACGATTAGAACTGTTTATTTCAAA
AGATATATAAATACTCAGTACCAAAATAATGAAATATTATGAACCAAAAT
TGAGACTCCAGATTTTCTGTTTCCCATTCAAAACATTTGATGTCTTGTCA
ACTAATTATCATGTTTTCGTACTAAACAGAAAATTTGGAAATTTTCTTAG
CCCGCTGAAAAAAAACAAGAAAAAATCTCTTAGGAAAACAAAGTACACAT
TTTTTTATAAGAACATCTAATAATTTTGGGAAGCCTTCGGATGTTCTGAA
CTTTTTTGAGTTTTAAACTTGAAAATGTTCTTAAAATGTTCTTATTTTCA
CCATTTATAGTTGCTATTTCCTAAGAAATTCATTGTTTTAGAGTCCGTGA
AGTCTTAAAATGTTCTTAACTTGTTCTTAATAATTTGGTCATAGAAGCCT
TTTTGTTCTTATATAGTTTGATCTTATAAAAACAACGTGTAGATGATTTC
TTCATGTCGTTAGTGTTATCAATTCTCAGATGGTTTTTTCTGTAGCTACT
ACGAGGATGATATGAAAAGATTTTATATAGCGTCATCGAAAAAAGGTCAA
GGATGCCAAATTGAATCAACAACACGCAATAAAGGTCTTTTGAGAATTCA
AAGATGGAAAGGAGGAATCGCAAATAAGTAATGGAGAAATAAAGGAAGTC
AGATTTTTTGAGATTGTTCAACACGAGGAGGAGGAAGTTTGCTGGAGAAT
ATTGTGGTCGAGAATAAATAATCGTTGAGAATAAATAATCGTTGTTGATA
TATTGCTGAAAATATTTTAAAGCATTGTTTATGGTTTTGTTAACCTTGAT
CGCCTACCGTAGTTTTGTATAAAATTTTTCATATTTCCGCACTAAGATAC
CTTTACCACTTTTCTAGCGGATAAAGACCAAGACTTCGGGTAGTTGAAAA
ATAATATTCGGAAAGTTAGGCAGTTTCATGAGCAAACACAAGATTTTCCG
TACCTTTCCAAACAGTCCTTTTCCAATCCTATGCAAGTTATCGCGGGAAA
AGTAGCGGAAAAATTCCGGAAAAGTGACAAGAATCTTATTGCGGAAATAA
GAAACTTATACAAAACGACAATACGAAAATTGGGAATGCAGCGCACGCGC
ATTTACTCAACAAGTTATTGCATGCAGTTAAGAGTTAGGATTAGACTCCC
AGAGTATAAATTTTTAGAATATGGTATGGCGAAGTAAATTTATTTTATAA
GATTCTGAGTCTGGACATTAAGACTGCATTTCCTGAAGATTACTTGTGTA
AAACTTCAGAGCGCCTCTAGAATTTGAAATATCGTAGTGGGTATACACGT
TGTTTTTTAAAAGAATGTCTAAAGATCTTGAAGTCATAGTTTTAAGCCTA
AAAATGCTCTTCTTTATAGCTTGTTCTTATAAAAAACGTTTATCCCCTCG
CACTAGCTAGGCTTGATTTGCTATATATTTTTGTTTTGCGGTACGGGTCG
AACATTTAAGAGGGTTGATCAGTCGTTAGTTAAAAGAAAGTTTTAATGAG
AAAAGTTTGATGAAAAAGTTTGATTGATGACGAAGGAATATGATAAAACT
CTTGAAGAGGTTTTGAGTCTAGTTTACTGCTTGGATATCCAGCCTAAGGA
AGAGACCCGGGGAGGGGGTACTATGGTTGGCAGATGAGGACTCCGAAAAC
CGACCTTAGAGAGACCAAATTTTTAGTGAACAAGCGCCCCTTAGAGAGAC
TTTTTTGAAAAATGTTCTTCGACTTTTGAAAATATCTTACCCTAAGAGAG
AATTTTTTACAATCTTTTCTCTCGAAATGAAAAAAATTTCCCTTAAAAAT
CCTGAATTTTCAAACCCTTTCAAAACCAAGTCATTTGATAAGGTTTGTCG
TTGTCGAAAAAAAGTTTAATGAAAAAGTTAAAAAAGTATAAGGAAAGTAT
AAAATTTGAGTCATTTTCCAAAACTTCAGGCGTGGAAAATTTACTAATTA
ATTCACACCATAGATATGTTTTAATGATTTAAAATTTAAACCTGGATAAA
AAGATGAGAAAGGGTCTTAAAATGAATTTTTCTTTATTTAGCCGTTTCTT
NCCATAGATATGTTTTAATGATTCAAAATTTAAGCCTGGATAAAAAGATG
AGAAAGGGTCTTAAAATGAATTTTTCTTTATTTAGCCGTTTCTTGAAACT
GGCTTCAGCTTAAATCGAACCTCGTATATTTTTATAAAAAGATTGTTGTT
TTTATAAAAAAAGCCTGGAAACCAGATAAAAAATGGAAGAAAATGAGAAA
GAGAATCGGTTCCCGTCTATTTTCAACAATGCGGGCACGGCGATTGCCAA
TGTTGGTAAAATGAGTGGGACAGCGATCGCTGATAGAGCTGGTAGAATTG
GTGGTACCGTTGCTAACTTTGCCCGAAAAACTAAGAAAAAGGTGTTGGAT
TTTATACAAGATCTTTTGATTGAGTCTAGGCCATCTATTCAAATTTAGTT
TGAAAATAACAAAAAACACATTTCAAGTTATATGTCGTATACCATAGTTT
ATATGCTAGACGACTACTTTAAAAGACGATGGGGTGGGGTATGGTATAGT
ACTCCAGGCAAGATATAACTTGGCCATAACTGATGCACATAATTGGTTTA
ACATAGAAGTTAGATACAGTTGACGCTCTTTAATTCGACGTTCTACTATT
CGATAGGCTCCCTTATTCGATGAAATTTAAAGTCCCCGTCAACAAGAAAT
TCTCATATATGACGCTCCCTTATTCGATAAGCTCCCTTATTCGAAAATCC
AATTCCCCTTGGAGGTCGAATTAGAGAGCGTCAACTGTATTTATGTTTCT
TATCTCTATAGTTGATGTAAAAATTTTACAGACTATTATAGTACAGATGT
CTTTGCTTGAGACTAATTAATATCAACTATGGAACATAGCGCTGTCTTAC
TGAAACCGTTTTCGTTCTTGTTTTTTTTAGAGTCAACAAAGTTTATCTGA
CAGCTTGACAATCGAAGAAATAAACGGTATGTCTATTTCAAATTCTTTCA
GGTGAAGAAAAGCCGTTACCCTAATTTGTGTATTCAATGTCAGATGGCAT
CCCCTTTAAACCTACATACGCTTTAGAGCCATTCAGAGAAATCGTCAACC
ATACGATTCGAAATATTACCGAGTTTATGTATCGGAGGATATCGAGGGCG
ACGGTTGTGAAATCGATACAAAGCAAAGTCGATAGTCGATGTACGGCTCT
ATATCGTCTTTGCTCACCTAAACAGACGGAGACGACGGTATTTTGGTGTT
TTTACCGTCGTCGAGCAAAGTGGCCGGTGATTTTGGAGACATGTCAACAT
TGCTTTATACCGTCCCCCTCGATTTATCTCGAATACAGAAACTTGCTATT
CAATGAAAGAAAGTGGAAATGCTAAAATGGCAATACTCGCCCGAATTTTA
AATTCTGAAAAACGTGAAAATACACTAAAATCCGAACATATTTCGACCAT
GATTGTACATACGCTGTGCTCGAGGTTGGCTATTTTTCCGAAAAAAACTG
ATTTAGGTACAGAATTTACAACATTAATCCTGTTGAAAATTTTGTGAAAG
GTATGGAAAAAATTTAAGTCTGAAAAATATAACATCAGGAATCAAAAATT
ATAGCCTAGTAAACTAAACCCGTACTCACAAGGCTAATGACTATTTTTTT
CCGAAAAAAAACTGATTGTGATATAGGTTAGATATGGGTAATAGCCAAAA
AATAAGTTTTGTGGAGAATCCCCCTTTTGTTTTGCATATTACAACCTCAT
AATTGTAGGAACAAATGTATGAGTTGTATATGTTTTTTTATAAGAACAAA
CAATATGAGGCCACATAAAGCTTCGATGGCCAAAATATTAAGAATACGTT
AAGAATATTTCAAGGCGGAATCCATTTCTTGAGAACACGGACAGAAATAC
TCAGAAAATGGTGAAAATAAGAACATGTTAAGAACATTTTAAACTGGAAA
CTTAAAAAGTAAATGCCATCCGAAGTCTTCAAAGATTTGGATAATTTATA
AATAAAAATGTGCACACTAACAAGGGAAGCGGTAGATTATTCAGTTCATT
TTTTGTATAATAAGGATCCTGTTGGACCCATCAAAAATTTCTAAACGGAA
ATATAAGAGAGACCTTAAAACCATAAAACACTGACATGCATAGTTTGTCT
AACCTTACACGAAGTCAAATCACTTGTGGTTAGATACAAGAGGTTTTTTT
CTAACCGTTATAATTGAATAGGAGTATCACTCTTTTTTATAAGCACAATC
CTATACAAACAATGAAACTTATAAGTAAAAGTTGGTGTTTTGGCCGAAAA
AGCCTCAGTGCACGAATTTCCTATTAGCAAATTTATGTAAAAAATTCACG
TAAATACATCGAGCAAAGCTCTGATTATCTGATGTGTCAGTTTTACTCGA
CGTTTTTACGTGACCTTCTTAAAAAAAGTACAGAATTCAGATTAGTCCTG
TAGAAAACTTTATAAAAGGTATGGAAAAAAATATACCATCAGAAAGCAAA
GTTGATGAAATGGAGATTTAAAAAAATCTACGAAATCAATTTTTTTATAG
AATGTTGGGTAATAGATGATGATGTTTTTCTCACAACGGGAAGGGGAGCA
ATTTTTAGGTGAATCTTTTTTATCATTCATAGGGCACTGACATGTATTCT
TATATCAAATTCCATAAAATCAATCATTATTTGTTTTTCTTAAGAATATA
AACAAGCTTTCGCGTTGTACGATCGAAACTCGAATGGAACTATCAACCAA
AATGAATTACTAAGCGTCTTGAGAAGCCTGGGACAGAATCCAACTGAACA
AGAAGTCCAAGACATTATTAATGAGGTACGCGCATGCGCTATGATGTGAA
AAATCTTCAGAATTGTTTACTTCACTGCATGCTTTTTTATAAGAATAGGA
ACATTCATGTTATTCACACAAATTTAGAATAGGCTAAGAATATCACAATC
AAGGAATTCGGCAACTAAGCCTAAGAATGCCATTATTTTAAAATTTGAAT
TTTCAATTACCCCCAGTGTTCAGTAACTCTAAAACCTTCACAAAAATGTC
ATATTTTTGGCTTAAGGTTAAGGTACATGTTAATTTTAGCTTGAACCTTG
AGCCTAAGAAGGGGGGGTTTCACGGTTGGCGGAGGAGCGGAATCGGCCNA
GCTTTTTTTATAAGAATAGTAAGTAATATTCATGTTATTCACACAAACTT
AGAATATGCTAAGAATATCACAATCAAGGAATTCGGCAACTAAGCCTAAG
AATGCCATTATTAGAGCATTTTCAAAATTGAATTGCCACTTACCCCCAGT
AAGTTGTTCAGTAACTCTGAAACCTTCACAAAAATTGTCATATTTTGCCT
AAGGTTTTTATACCATCTTAATTTTAGCTTGAACCTAGGTAGAACCCAAG
AATACCGTAACAATATTTTTTGTCCCAAAGAATTAAAAAAACCATTCTTA
TAAATAATAAGCCGTGTAGGGTGGAAATAAATGCAGCAAAGTCAAAAATT
TCCGTTTGCCCATGCTGAGGAAGTGAATCTTTGTCAAATCAACCAGGTGA
TTTATATCCAATTTTTACCTTAGATTTTCGTCAAAATTTCAGAGACCTAC
CTCCAGGATTGTAGCATGCTTTTAGAGCCCCCCCCGGGGGAGATTGTCGA
GGTTTTTGGGGTCATCCCATAGAGGAAAAAAAATCTCTTGACTCTCTTTC
TTTTTTCATTACAGATGGATGCTAACAAGAACGGAAAGATTGAATTTCAA
GAATTTTTAGAGAAAATGGCAGAACGAAATGAGAGAAATGATATGAGTGA
AGACCTAAGAAACGTAAGTGACAGTTAGTGGTGAATCTATGAGGGATTCA
AAATTTGTGACGGAGGAGTGTTTCTTTTAGCCATACTCCTTATAATGAAA
CAAAGACTATCCATCATAAACTTTGAACCCCCTTCGGATCCGCCACAGAA
CACTTCATCTTAATAACGAGTAGTAGACATAGTGTGCAGAGTGGTCTGAG
CCCCCCCCCCCATTAATATTTCATCCCCCCTATAAAGGTATCCCCCCTAT
TTTTAAAATTTTTTGATCTCGCACCATTTACAGGGGTCCGAGCCCCCAGC
ATATAATTTGTATTCCCAGTATTGGGGAAGAATTTTGATGAATGAAATAT
ATTTTTCANNNNNNCCCCCATTTTAACTGGAAAATTGCCCATCCCTTGAA
AACTCGGATCCCCCCTTAAAAAAAGGGGGGGTTCATACTATGGTAGATCC
CAAGTTTCATGAAAAGATCGAAGGGGAAGAAATTAATCTCATACCGAGAG
GCCCTTACGCCACTTTTTGATTTTATTGATGGACTTGATTCAATCTTTCG
TGAACAATATCAGATCCAAGAAAATGCAAGAGACACGAAACATGTAATTC
ATTTGAAAGAGAATTTGATCTTACTGAAAGGTGCAATCTCGCTTCTGGGT
GTTTGATGCCATAATTAATGAATCTGAAGTCATAATTGATGACGCGATCA
CTTCACATCTAGTTTCTATGAATGAAAAGTGAATAAATTTCATCAGATAA
ATTTTACCTATTTAATTTTTTTAAAAGGTCAAACGTATACTTTTTCACCG
ACCTATTTCACGACAGGATATATCATGCCAGAAAGCTGTTTTCACTGTCC
TAACCAACTTTTTTTTTCGCGCAATCCTTTCTTTAGGCAAAAAAGGTTGA
GAAAAAAACTGTCGCCCATTTCGCGTGAAAGTGGAGACCGGCCTTTAGGA
ACTATAGCGTCTGAACATGATTTTAGTATAAGCTTACTACACTGATGTAC
TCCAAAAGTTACAACTACCAATCAACTCTTTAAAATAATCCTATGCTGCT
GGCTATTCCTGTTCCTTTTACTACAGGTGGCTTTTTGCAGAGGTATTCAT
TAAAATAGTCCCCAAATAATAAAAATCAATTTAACGTTTTTGTTAAATTT
GGCTAACCGAGCAGCTGTAATCTTTTTATTTTTCCTATTTTATATTTACA
GGCTTTTAGAGTATTCGATGCAAATGGTGATGGACGAATCAGCGTTGAAG
AATTACGTCACGTGATGGTGAATTTGGGCGATCCATTAACGGATGAAGAG
GTCGATGAAATGATGCGAGAAGCAGACAAAGATAATGATGGTTATGTTGA
TTATGAAGGTGAGTGGGCGGAAGGGCGGAAAGACAGAAGAGTGGGTGTAG
AAGAATAGAAGCATGGGTGAAGAGTGTGTCAGAAAAAATCGAAACAGATA
GTAAAATCTCGTATATCTAACTGGAGTTTAGAATAATTAAAATCAAAATG
CTTAACAATCAATAGATTTTAATTTTAGATTTCAAAGGTAATTGAAATGG
AATTTTTGAAAAAGGAATTTAGTAATTAGTTCATAAAGGTCGATATATTA
TGAGGATTTTTTATCAATTCTGTTCCACTTTTTTCCGAACACACTGTAGA
ATGATAGAAGGCTAAGGACGCTCTGATTCTTGAACTCAGAGGTAGGATAT
GAAGTCAAATATAATGATAAATATGTTGGTTATGAAAGCAGGGGGATTGA
TAGGCAGAAACAAGGGTGTCAACCCTCTCAACCCTCTCCACCCTAGTTAA
AGTCCTCGCCGTGTTATTATAGAGACAGGGGTATCGATTTGAAAAAAGTT
TTGCCTATGTCAATTTGGACAAAGTTTAGCCTAAGAAACAGGGGGTGTCG
ATTTTGAAAAAGTTTAGCCTAAGAGACAGGGGTGTCGATTTGGACAAAGT
TTAGCCTAAGAGACAGGGGTGTCGATTTGGACAAAGTTTAGCCTAAGAGA
CAGGGGTGTCGATTTGGACAAAGTTTAGCCTAAGAGACAGGGGTGTCGAT
TTGGACAAAGTTTAGCCTAAGAGACAGGGGTGTCGATTTGGACAAAGTTT
AGCCTAAGAGACAGGGGTGTCGATTTGGACAAAGTTTAGCCTAAGAGACA
GGGGTGTCGATTTGGACAAGGTTTAGCCTAAGAGACAGCGGTGTGGATTT
TGACAAAGTTTAGACTAAGAGACAGGGTCGTCGATTTTAACTAAGCCTAA
CAATAATACCATTTTTTTAACCATTTTCTTCTACCATTTTTTTCAGAGTT
TGTAACCATGATGACAGAATGAAAAGACAAACAAAATATTGGATGACATG
AATGATGGACAAGAATTTTAAAACAAATTTCTTGAGATTCGGTTGGTTAC
GTGTCAAGCTAGTGAGACATTTAGAAATATTTATCCAAATNTTCTTGAGA
TTCGGTTGGTTACTGTGTCAAGCTAGTGAGACATTTAGAAATATTTATCC
AAATTCCATTGTGTATCTAATTTCCAAAGTAGTCGATTTAGTTGCCCAAA
AGATCCACTTTTTTCGGGTATGACTGAAGAAAAATGATGAACCATGACAA
AAAAAACAATTGTAAATATTGAATTATCTCTATCTAATGATATACTTATT
TTGAAATTAAAAAGATTTATCGTTGTATTGTTAATTAACGTAAACATTTA
TCAAGGTCAAAAATTATTTATGTATATTTTACATATTATATATTTCCATC
AAGAAAAAAAGACATTTGAAAAGTATAAAACTTAATTTACAGTATACACT
AAATTTATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001932XLOC_001932Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003476-exon-sc0000028-1575043694:203099..203252TCONS_00003476-exon-sc0000028-1575043694:203099..203252Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1575043694:199077..199122TCONS_00003476-exon-sc0000028-1575043694:199077..199122Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1575043694:197228..197358TCONS_00003476-exon-sc0000028-1575043694:197228..197358Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1575043694:196240..196338TCONS_00003476-exon-sc0000028-1575043694:196240..196338Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1575043694:194895..195051TCONS_00003476-exon-sc0000028-1575043694:194895..195051Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1575043694:193442..193956TCONS_00003476-exon-sc0000028-1575043694:193442..193956Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:203099..203252TCONS_00003476-exon-sc0000028-1510915933:203099..203252Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:199077..199122TCONS_00003476-exon-sc0000028-1510915933:199077..199122Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:197228..197358TCONS_00003476-exon-sc0000028-1510915933:197228..197358Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:196240..196338TCONS_00003476-exon-sc0000028-1510915933:196240..196338Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:194895..195051TCONS_00003476-exon-sc0000028-1510915933:194895..195051Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1510915933:193442..193956TCONS_00003476-exon-sc0000028-1510915933:193442..193956Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:203099..203252TCONS_00003476-exon-sc0000028-1491911889:203099..203252Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:199077..199122TCONS_00003476-exon-sc0000028-1491911889:199077..199122Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:197228..197358TCONS_00003476-exon-sc0000028-1491911889:197228..197358Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:196240..196338TCONS_00003476-exon-sc0000028-1491911889:196240..196338Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:194895..195051TCONS_00003476-exon-sc0000028-1491911889:194895..195051Clytia hemisphaericaexon
TCONS_00003476-exon-sc0000028-1491911889:193442..193956TCONS_00003476-exon-sc0000028-1491911889:193442..193956Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:193442..203252 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39963	0	0.318432	0	0	0	17.7239	19.8775	50.9039	27.9274	30.9536	43.5799	0	0.163583	0.744456	0.53261	11.8175	18.222	0.432367	1.69391	42.537	43.5898	7.09543	12.9202	15.4838	11.906	0.620999	0	0	0
Blast
[Close]
BLAST of TCONS_00003476 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.246e-57
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 2 
Query:  167 LSDSLTIEEINEYKQAFALYDRNSNGTINQNELLSVLRSLGQNPTEQEVQDIINEMDANKNGKIEFQEFLEKMAERNERNDMSEDLRNAFRVFDANGDGRISVEELRHVMVNLGDPLTDEEVDEMMREADKDNDGYVDYEEFVTMMT 607
            ++D LT E+I E+K+AF+L+D++ +GTI   EL +V+RSLGQNPTE E+QD+INE+DA+ NG I+F EFL  MA + +  D  E++R AFRVFD +G+G IS  ELRHVM NLG+ LTDEEVDEM+READ D DG V+YEEFV MMT
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00003476 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM34.246e-5761.22Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top