TCONS_00003800 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003800
Unique NameTCONS_00003800
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2419

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=transcript|length=2419bp
cttgTTTAATGTCGAATTCGTCAACAAATGATGTCTGACTTGTTTTGTTA
AGCGAGACATGTTCGTTTTAAAATTCCCTGTAGTTCAGTTTTAGGAAAAC
CCATTTTTTTATAACGTAGACAAAACATCAACCTTTAGATCATATGAATT
TTCGAACTAGTATGAGAAACAgagtttggattttttttatgaagtttGAA
AAACCAATACTTCGATTAAGCGCGTAGTAGTACTCTTAAACAGCTTTCTC
AATAGAAACGTGAAGCATAAGCATCAGGTACTTCTAATGGCTTCAGATAA
GGTTTGCATTCTCACTGATCAAGACGAATTAAGTGAAGAGAATCTGGAGG
ATGATCAGAACTTTGGAATTTCATTCTCCAACAGTACACTGGTGATGGAA
AATGACAACCAGGAcgaaaaatcaccaaaaattgaaaaccaaCAGGAGAA
TCGGTTTCAAGAATCAAGAAGAGAGCAATCTGAAAGCATGTCTCTGAATG
AGTCAGAAAGTAATTCATCCGAAAGCAACCCTAGTGAGGACTCAAGTTAT
AAACCAACAAAGAAGAATCGATCCAAAAGCAATCCCACTGAAGATTCTAC
CTTTGCAAAAAGAGTCAAAAATCGATCAAAAAGCGACCCATCTAGGACAT
CTATCTCGTCGTTAGGATCAATCAACTTTACTGGATCCTCAGTGATTTCG
CCAGTGATCGAATCTGCCAACAATTCAACCGAAGACGAAAACAGAGACTT
CGAGATTGTGAGAATTCCTGCTGAGAATGAAATGGAGATTATGAAGAACA
ACAATGATCCACAAAATGAAGACCAGATCTTGGAGAATATCAATATTTAT
AAATCATGGTGGAAATACCCGTTAATTTTTTCAGGACTCTTAGGATCACA
GCCTGCTCCTCGAGAAAAGAAATCCAAAAGATATTGTAGCACATTATGCT
TTAGGCGTCTCCTTATATtcgttttatttctatttcttctGGTCCTGAAA
TTTGATGGATTATTCCAAATGAGTTGGATACTACTTGAATCAAAGTTTCC
GTTCACCGTTATCAATAATGTGGTCTGGGAGCTGCGATGGATTTTAACGT
TCTTTCTCTGCATGCTTTTTATGGATAAAGGTGGATTTCATAATTTCTTG
AGTCATGTAGAAATCTCACGAAAAAAATGGTATGAAAATGCAAGAAAGAT
GCGGACCTACATCGGTGTTGTTTTTGTCATCACAGTTTTCGCCCCACCGA
TGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTCTTGCAAAA
CCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTCTTGTATCG
TTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTTGTATCTGT
TGGGTGATCATATAAGGATGACTGGGAAACgaatttcccaacaaaaaacA
GCAAACGATGCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGA
GACTGAGCACTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGT
TTTGTGTCTCCTTCACCACAGCTATGTCTACGTTAGAAAGATTGGAATTC
ACATACAAGTCGAACGATGGAAACAATACGTCAGGTGGAGTTGTTCGAGT
AAAAATTATCGATCAAGGACCTGCAGCAAATCTCCCAATCACCGActtaa
taaatttgaaaactaaTTTCATTGAAATGAAGAagcattttgagaaaatg
aacAAAGCTGTTGGACCAGAGACCAACGACTCCAAAGAAAACGATGGTAA
CGGTCAACAAAGTGAAATCAAAGCTGAAGATCTCCAAAAAGCTTACGAAC
TCATTGGAGATGTCCAACAACGCCAAATCCAATTGATGGAGAAGCTAGTC
CAAAATAATTATCACCACAAGCAAAACACAACAATCGAATCTAGCCTGCA
ATCGACACCCTACATCATGAACGTATTGGGTTCCATACCAGACAGCTATC
GCAAAGTTCGTGTTGTGTTAGACATGTCCATGATGTTAATCGAGATCTTA
CTTCTATACATGGCGCCATTATGTCTTATTGTACGGACCGACTACCAGCT
ACGGGAAGTTATCCACAAAGCATGGGATATCAATATCAGTcaacaaatca
ataaaaatcTGGCAATTACTACTTATAGTATGAAAGAACATTTGATAGCA
CAAATTAAAGATATAAAAGGCTTTAGAGTGTGTGGATACAGGGTTGAATT
CTTCAAAACTTTGATTATAGCATCTTTCGGACCTTTCTTAGCCATTGCTA
TGAGAGCAACTTTACAACACTATGGAATCAAGTAATCCTGTGGGAAAAGA
ATTAAGATGGTTCGAAAAATCGAAAACGAATTTGATGAAaatgtctcccg
aatagacggggggaggggg
Run BLAST on NCBI

protein sequence of TCONS_00003800-protein

>TCONS_00003800-protein ID=TCONS_00003800-protein|Name=TCONS_00003800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MASDKVCILTDQDELSEENLEDDQNFGISFSNSTLVMENDNQDEKSPKIE
NQQENRFQESRREQSESMSLNESESNSSESNPSEDSSYKPTKKNRSKSNP
TEDSTFAKRVKNRSKSDPSRTSISSLGSINFTGSSVISPVIESANNSTED
ENRDFEIVRIPAENEMEIMKNNNDPQNEDQILENINIYKSWWKYPLIFSG
LLGSQPAPREKKSKRYCSTLCFRRLLIFVLFLFLLVLKFDGLFQMSWILL
ESKFPFTVINNVVWELRWILTFFLCMLFMDKGGFHNFLSHVEISRKKWYE
NARKMRTYIGVVFVITVFAPPMFVFLDQNWLNIASLAKPDMWKKILMAVL
VFLYRLIMTPSFCVLSAVLYLLGDHIRMTGKRISQQKTANDAHDLVRKMR
KLITETEHSLQINIVVHMFLVFCVSFTTAMSTLERLEFTYKSNDGNNTSG
GVVRVKIIDQGPAANLPITDLINLKTNFIEMKKHFEKMNKAVGPETNDSK
ENDGNGQQSEIKAEDLQKAYELIGDVQQRQIQLMEKLVQNNYHHKQNTTI
ESSLQSTPYIMNVLGSIPDSYRKVRVVLDMSMMLIEILLLYMAPLCLIVR
TDYQLREVIHKAWDINISQQINKNLAITTYSMKEHLIAQIKDIKGFRVCG
YRVEFFKTLIIASFGPFLAIAMRATLQHYGIK
Run BLAST on NCBI

transcript from alignment at sc0000031:464876..471623-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=transcript|length=6748bp|location=Sequence derived from alignment at sc0000031:464876..471623- (Clytia hemisphaerica)
CTTGTTTAATGTCGAATTCGTCAACAAATGATGTCTGACTTGTTTTGTTA
AGCGAGACATGTTCGTTTTAAAATTCCCTGTAGTTCAGTTTTAGGAAAAC
CCATTTTTTTATAACGTAGACAAAACATCAACCTTTAGATCATATGAATT
TTCGAACTAGTATGAGAAACAGAGTTTGGATTTTTTTTATGAAGTTTGAA
AAACCAATACTTCGATTAAGCGCGTAGTAGTACTCTTAAACAGCTTTCTC
AATAGAAACGTGAAGCATAAGCATCAGGTACTTCTAATGGCTTCAGATAA
GGTTTGCATTCTCACTGATCAAGACGAATTAAGTGAAGAGAATCTGGAGG
ATGATCAGAACTTTGGAATTTCATTCTCCAACAGTACACTGGTGATGGAA
AATGACAACCAGGACGAAAAATCACCAAAAATTGAAAACCAACAGGAGAA
TCGGTTTCAAGAATCAAGAAGAGAGCAATCTGAAAGCATGTCTCTGAATG
AGTCAGAAAGTAATTCATCCGAAAGCAACCCTAGTGAGGACTCAAGTTAT
AAACCAACAAAGAAGAATCGATCCAAAAGCAATCCCACTGAAGATTCTAC
CTTTGCAAAAAGAGTCAAAAATCGATCAAAAAGCGACCCATCTAGGACAT
CTATCTCGTCGTTAGGATCAATCAACTTTACTGGATCCTCAGTGATTTCG
CCAGTGATCGAATCTGCCAACAATTCAACCGAAGACGAAAACAGAGACTT
CGAGATTGTGAGAATTCCTGCTGAGAATGAAATGGAGATTATGAAGAACA
ACAATGATCCACAAAATGAAGACCAGATCTTGGAGAATATCAATATTTAT
AAATCATGGTGGAAATACCCGTTAATTTTTTCAGGACTCTTAGGATCACA
GCCTGCTCCTCGAGAAAAGAAATCCAAAAGATATTGTAGCACATTATGCT
TTAGGCGTCTCCTTATATTCGTTTTATTTCTATTTCTTCTGGTCCTGAAA
TTTGATGGATTATTCCAAATGAGTTGGATACTACTTGAATCAAAGTTTCC
GTTCACCGTTATCAATAATGTGGTCTGGGAGCTGCGATGGATTTTAACGT
TCTTTCTCTGCATGCTTTTTATGGATAAAGGTGGATTTCATAATTTCTTG
AGTCATGTAGAAATCTCACGAAAAAAATGGTATGAAAATGCAAGAAAGAT
GCGGACCTACATCGGTGTTGTTTTTGTAAGTATTATAATTTGTACCCATT
TCCTTTTGTTCCCATTTTAAGATCATTGTACTCATAAGAGATTTGGCCAT
CAGCATTACTTTGATATACATGGAGAGCCATGTCTTAAATAGCCTGTTAG
ACGAAAAGTTTCGATAAGTCATCTTTCGTGGGACGCGATTTCTACAAAAA
AATACACGTAGCACACAGTCTTGAAATTTCGTTACATCTAAGACCTTTTC
AATTCCAGGTCATCACAGTTTTCGCCCCACCGATGTTTGTTTTCTTGGAT
CAGAATTGGTTAAATATTGCCAGTCTTGCAAAACCGGATATGTGGAAGAA
GATATTGATGGCCGTTCTGGTGTTCTTGTATCGTTTGATCATGACGCCGA
GTTTTTGTGTTTTATCAGCCGTTTTGTATCTGTTGGGTGATCATATAAGG
ATGACTGGGAAACGAATTTCCCAACAAAAAACAGGTTTGTGAATCTACTT
TCTCATGATGATTTCACCAAAGTTTGATCGACTTTTAAAACAATAATATT
CTTTATTCTATAAAGTGCAGCGTTTTGTAAAAAATTACTGAGGAATTCTT
GTTTTACCATAGTGCCTAAAAGCTACACCCAGCAAATTCTAAAACTTCTA
CTATCTAAATGGAATTGCACACTAGTGAAGGTAGTAGAAAATAGGCCTGT
GACTGGAGGACCTTAAAATTATGTAAAGACATCATTACACAGACTTTCTT
TCAATCTCTCTCCACTCGTAGCAAACGATGCACATGATCTGGTCCGTAAA
ATGCGAAAGTTGATCACAGAGACTGAGCACTCCCTACAAATTAACATTGT
GGTTCATATGTTTCTTGTGTTTTGTGTCTCCTTCACCACAGCTATGTCTA
CGTTAGAAAGGTCAGTATTACATCTCTGTAACATAGTATTACATCTCTGT
AACATAGTATTACACTTCTGTAACATAGTATTACATCTCTGTAACATAGT
ATTACATCTCTGTAACATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATCTCTGTAA
CATAGTATTACACTTCTGTAACATAGTATTACACTTCTGTAACATAGTAT
TACATCTCTGTAACATAGTATTACATCTCTGTAACATAGTAATACACCTC
TGTAACATAGCAATACACTTCTGTAATATAGTATTACACTTCTGTAATCG
TCAGCCGTGCAAAATTACTCGAATCTGATTGGTTTAGAGGAGTGCGATTA
ATCGTTAATTGCACTATTACCACTTTTTGCACTCTTCGGCGGGGGGACAC
CTTTGTCCCCTTATTCTTTTCTCTCCCAAGTTCTGTGTCAGCAGACTTAG
AACACTCCTGTGTCATAGACCCGCTGGGGACCCCAGCATCACTAGAAAAT
TTGGCTAAAATTTCGTCCCCGGTGGGAAAAATTACAATTTCAGCTCCATT
TAAAGAGCTACATTGTTTAGAATACAACACCCAAAAGACTACAAAAAGTT
TCACTCAACGGTAGTATATGTGAGAGCATTGCTGTACAAAAATAGAACAC
CAGTTTAGCACTACTTTGTAAACACCCAAGCAGCACTAAACTTTACTCCG
ACGACCCATCTCAAGTTTTATCACTTAAAAGACCCCTGCCTCACAGCCCC
GGTGGAATATTTTTCTCAGTGTAGATAAAAATTCCTATTGAGACTCCTTT
GTTCCAAGTGTTCCAAGGTTAAAAATTCCATGGGGGATAGTTTTAGAGTG
TAATTTTTAAACATTAAATTTCGAATGGGGATGAATTAAAAGTTAATTTT
CAAGTGGAGTTGAAATTATAAGGTATTTTACCCCAGGGACAAATTTTATG
TCAATATTACCAGTAGGGATAGGCTCCCAGCAGGTCTGTGACACAGGGGT
ATCTTAAAGTATGCACTCTTTTTTATTACCATTTGGAAACCATCTCATTT
CAATTAGGGTGATTTTCTTGAGAGTGGTCTTTACATGGTAACAAGAAAGA
GTGCATCCTATATGGGCATTGCAATTTATAATATAAAATGTATTACTGTT
TTTGAAATCTGGCACTAGATTGGAATTCACATACAAGTCGAACGATGGAA
ACAATACGTCAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCT
GCAGCAAATCTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCAT
TGTAAGTAGATATCAAAACTCGTGGTGCCATTTTCCGAATGGAAACTTAT
CTGAGGCAAAGTTTGACTGAGTTATACGATTCAAGGAGCACCTTTTTCGA
TTTTTTTTTTCGATTTTTAAAAATGAAAGTTTTTCAATTCAACACTATTA
TTATTAAGCCTCCATAACTCGAACACGCAACAGGAACACAAAGTTAAGTT
CCAATTATGGAAATTTCATGCTATGGTTTATAAAGCATTATAAACTGGAA
CCACAAAAATCTTTTCAAAATTTTTCTTCTTCGCGAGTCCTCAAAGTTGA
AACACTTTTCCTCGCAAAAGTCTTCATTTTCTTTTTCATCACTTTTTTCT
TTACAATTTTTGAATTTTCAGATTCAAGAATAGTTGGCCTAACAGAAAAT
GTATAACATGCTATAGTTGTTTTGGTTACATCAAGCAGAAATCTATACTT
TGTAAATGTCAAATCNTTCAGGAATAGTTGGCCTAACAGAAAATGTATAA
CATGCCATAGTTGTTTTGGTTACATTAGGCAGAAATCTATACTTTGTAAA
TGTAAAATATAAAAATTTCACTATGATAGAAGTTCGAATTGTGGCTAGAA
GTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCG
CGGCCTTGAGCGGCTCGCCTGGTTTTTACACAAATGACAGATTGAAACTA
AAATTTACCGCTAAATTTCGAAAAAAATATCAATCGTAAACAATGGAATT
GCTAGATTCAATCTGTTAAGGCTTCACTTTTTCTTGCCTGAGAAATGGTC
TACACTGTATTCAGCCAACATTATTTAATTGACCACTGTTGAATTCTTTT
AGGAAATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAG
ACCAACGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAA
AGCTGAAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAAC
GCCAAATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAG
CAAAACACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAA
CGTATTGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAG
ACATGTCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTA
TGTCTTATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGC
ATGGGATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTA
CTTATAGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGC
TTTAGAGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGC
ATCTTTCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACT
ATGGAATCAAGTAATCCTGTGGGAAAAGAATTAAGATGGTTCGAAAAATC
GAAAACGAATTTGATGAAAATGTCTCCCGAATAGACGGGGGGAGGGGG

Coding sequence (CDS) from alignment at sc0000031:464876..471623-

>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=CDS|length=2049bp|location=Sequence derived from alignment at sc0000031:464876..471623- (Clytia hemisphaerica)
ATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACGAATTAAGTGA
AGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTCTCCAACAGTA
CACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACCAAAAATTGAA
AACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGCAATCTGAAAG
CATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGCAACCCTAGTG
AGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAAAAGCAATCCC
ACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGATCAAAAAGCGA
CCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAACTTTACTGGAT
CCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTCAACCGAAGAC
GAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGAATGAAATGGA
GATTATGAAGAACAACAATGATCCACAAAATGAAGACCAGATCTTGGAGA
ATATCAATATTTATAAATCATGGTGGAAATACCCGTTAATTTTTTCAGGA
CTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCAAAAGATATTG
TAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTATTTCTATTTC
TTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTGGATACTACTT
GAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCTGGGAGCTGCG
ATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGATAAAGGTGGAT
TTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAAATGGTATGAA
AATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTTGTCATCACAGT
TTTCGCCCCACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTG
CCAGTCTTGCAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTG
GTGTTCTTGTATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGC
CGTTTTGTATCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTT
CCCAACAAAAAACAGCAAACGATGCACATGATCTGGTCCGTAAAATGCGA
AAGTTGATCACAGAGACTGAGCACTCCCTACAAATTAACATTGTGGTTCA
TATGTTTCTTGTGTTTTGTGTCTCCTTCACCACAGCTATGTCTACGTTAG
AAAGATTGGAATTCACATACAAGTCGAACGATGGAAACAATACGTCAGGT
GGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCAAATCTCCC
AATCACCGACTTAATAAATTTGAAAACTAATTTCATTGAAATGAAGAAGC
ATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGACCAACGACTCCAAA
GAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAGCTGAAGATCTCCA
AAAAGCTTACGAACTCATTGGAGATGTCCAACAACGCCAAATCCAATTGA
TGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCAAAACACAACAATC
GAATCTAGCCTGCAATCGACACCCTACATCATGAACGTATTGGGTTCCAT
ACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGACATGTCCATGATGT
TAATCGAGATCTTACTTCTATACATGGCGCCATTATGTCTTATTGTACGG
ACCGACTACCAGCTACGGGAAGTTATCCACAAAGCATGGGATATCAATAT
CAGTCAACAAATCAATAAAAATCTGGCAATTACTACTTATAGTATGAAAG
AACATTTGATAGCACAAATTAAAGATATAAAAGGCTTTAGAGTGTGTGGA
TACAGGGTTGAATTCTTCAAAACTTTGATTATAGCATCTTTCGGACCTTT
CTTAGCCATTGCTATGAGAGCAACTTTACAACACTATGGAATCAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002116XLOC_002116Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003800-exon-sc0000031-1575043694:470399..471623TCONS_00003800-exon-sc0000031-1575043694:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:469940..470165TCONS_00003800-exon-sc0000031-1575043694:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:469514..469652TCONS_00003800-exon-sc0000031-1575043694:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:466423..466555TCONS_00003800-exon-sc0000031-1575043694:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:464876..465571TCONS_00003800-exon-sc0000031-1575043694:464876..465571Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:470399..471623TCONS_00003800-exon-sc0000031-1510915933:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:469940..470165TCONS_00003800-exon-sc0000031-1510915933:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:469514..469652TCONS_00003800-exon-sc0000031-1510915933:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:466423..466555TCONS_00003800-exon-sc0000031-1510915933:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:464876..465571TCONS_00003800-exon-sc0000031-1510915933:464876..465571Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:470399..471623TCONS_00003800-exon-sc0000031-1491911889:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:469940..470165TCONS_00003800-exon-sc0000031-1491911889:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:469514..469652TCONS_00003800-exon-sc0000031-1491911889:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:466423..466555TCONS_00003800-exon-sc0000031-1491911889:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:464876..465571TCONS_00003800-exon-sc0000031-1491911889:464876..465571Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003800-proteinTCONS_00003800-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:464876..471623 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0237757	0	0	0	0.61804	0.516397	0.81395	1.979	1.15099	0.35103	2.83527	2.50318	6.43639	6.33703	1.81473	1.99233	4.11798	3.34232	0.891878	0.717713	1.06	0.977825	3.37578	6.58931	0.124822	0.201587	4.5425	3.18765
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003800 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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