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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007264 ID=TCONS_00007264|Name=TCONS_00007264|organism=Clytia hemisphaerica|type=transcript|length=4004bp
CAACGCCATAAAAGAgaagaaaacaattttcaattaatttgttATTGTGT
TGTTACGAGTTCAGTTCTAGAGAAAGGAATTAATACCATGCTAGTCAGCA
TGCTGTGATGAGCACATTTTATACGAAGATCCTTAGGGCTGGAACAAATT
GATAAAGAAGGACCATATTGTTGAAGAAAAATGGGAATTGCAATGTTATT
GTTGAGCTTGTTTGCTTTATCGTTAACAgGTGTGATATGCAGCGAAGTGT
TCATATCTCAATCGACCGGTATTGATTCACTCAACTGTGGTACATCACAA
TTGCCATGCAAAAGCATTGAATTTGCCTTAAAGAAAGATGATCAAATCTC
CGTACTATCTTTAATGGAATCTTACCGTTCGATTGGTCCAATTGCAATTT
CGggaaatcaaattttgattcGACGCGCTACTCAAGTTAAAAGCCCAATA
ACACTTTCCTTTAACGGTATAAGTTTATTCAACTATGAAAACACTACTAC
TAACAGCAGTCTTCGATTTTCATTCCAAAACTTAGAATTAAACAATGTAA
CGTTATTCTCGGATGAAACTGTCAATACCAACGTCTATTTTACAATCAAT
GATTGTACCATACAAGGATCAAAACCAATTATCAAGACTTTGCCAAATCG
AAACCAAActaaaacaaatgatttccTAGCGATTGATATCCGGAATTCCA
CCATCGACATCTCAGGCTATATCATTCAACATTCTGCAGCCTCTCTTCTG
AAAATCAACATTCAAGATTCATCCATTTTGACCGGAGCTATCTTCACCAA
CACTTCATTGAACCTTAACATTCATAACACTCGTTTTGAAGGAGGAGTTA
CGAGTAGGCAGCAAACCACACAGGCCAAGATTCTCGAAATATCTGGTAAT
CCTCAACAGACCTTGATCAACTTAACCAACATTGAAATCACCGGGAACCA
CTTTAGAAAGACTTTCCTACATTGTAAAAATAGTGATATTTACATCCACA
ACATTTCCCTTAGAGATTGCAAAATCGGTCAATTATTTGATTTCACTGAT
GTTACCAGTATAATTGAAGGTGGAATCTCTTTAATTGGTGTCCAAAGCGA
GGGTGCATATCTTATCGATACTAAAAAATCCATTGTCAAGTTCACTGGAC
TTGTTAATCTTTTAGACTCCCATGCAAAGTTATTAAAGGGGCAACagaaa
agtcatttgattttcGATCATCTTCAAGTTATTGACACAGTCGCAGAACA
CATTCTTATGCAGTTGGCACACTCGCAAATGACTGTACGTGAATTGAAAC
TCCAGCGTCATCACTGTACTCACACGGcggtttttattcaaaattcaaac
GTAACAATCGAAAATgctgaaattttgaactctAAATTCCAGTTTggttt
cttccttttttccaaCTCTCGTTTAATCATCAACAGGGGACGATATTTAG
AGAATGAAGTATCTACTAATTTCTGGGGAATTGCTGGCTCTCATATTGCG
CTTTATAACACggaatttcataaaaacaaagGCTGGCAAGGGCATAAACT
GGCTATGAACAATATCATTGCCGCTGAACAAAAGAGTAacgttatcttca
aaaatataaatatcaCTGAAAATGCTTATTTCTCTGGAATCAAAGCCTCC
TCCTCGAACATGGACTTGAATTACATCAATTTCGTGGACAATCGAGCTTA
TTCGCATGGTAAAACCGTGATTTACGAGGGTGAAACTTGTGACCAATCTT
TCAATATCAGCATTCAGAATATCTTCGCCAGAATCACCAATCAACAAGAC
TTTGAACACATGAGCGCTATATTCTCAATTGATATCATCCATTCAGCTCT
AATTTTGGACAATGTTGTTATTGATGTCCAAAGCATGTCATACCCTCAAA
TCAGTACACTCCATCTCAGATTCGCAACGTTAAACACGAAGGTGTTACAA
AATCCTAATAACACGGCGTATATTGTTAAATGCCCACCAAGCTATAACCC
AAGCGGTATCCCCAAGCTACAGTTTGATTTTTATTCGTACACACTACTAT
GTATACCTTGCTCACGTGGGACATATACGTTGGCACGTGGTTCTGAGAGC
TTAAGATACATCGATAATGTTGATTGGGATGTTGAGACTTGGAAAAACAA
TGACCGGACATTTGACGTTAAAGATTTCACTCACGTCCAGGGCTGTACTG
CTTGTCCGGCAGGAGGAAATTGCACCTTTGGTATTAAAAGCCAGGGCAAT
TATTACGGACAGATAAAAAAAGAGACTGAGGAGAGTGAAGAGGTAGAGTT
TATTCCATGCCCTTCTTTTTATTGCTGTTCAAATTTACAGAAAACATGCC
AAAATATCACAAGTTGTAATACAAATCGAAAAGGAACACTCTGCGGCTCA
TGTGAAGATGGTTtcttcgaaaattatttttacccaACATGCATTTCGAA
TAATGAATGCACTGCTGTTAAGATGAGACGATTCTGGCTTGTTTACACTG
CAACCGCTTTTGTGTtaaccattttgattttcagcaTCAAAGATTTGAGT
TATTTTTTAGCAGGTGTGGCGCTATATCTCAAAGTAAAACTGACCGCGTT
ACAAAAGAAATTCATGAAAACACGAAGTCTTGAACGTTATAAGAAAACAC
CTGGTTCGATTAATTACAATGGTCATCAAATTATCAACGACTGTCTAGCA
GAGCCTGAAAAACCAAGACGTTTTATTTTCTCCGCGGTTCTACAAATCAC
CTTAGCATTTTTCCAGATCGTTAGTTTAATCAAGTTACGTAACCAATCGA
ATACGAGTAAAACCATGACCCGAATCTTCGACTTGTTCAATTTACAGATC
GCGTTAGATGAAGCTGAAATTGTATGTCCATTTGAATCTATGAATGTTGT
TTGgaaatatttcatcaaaaatgttcttttcaTCATCTGTATGGTCATGT
TTCTCATCATCGCTACCCTCATCAACCAATTCATCCGATTATTCAAATGT
AAAAGTATATGCAAATCGAaaagttttgaatatttttcaccACCAGAACA
TCAACGTCTAAACTTTTTGGATAAACTTGTGGTTTGTTATACCAAAGTTC
TTGCGTTTGGGTACAAGAACATTTCATTATTTGCTATCATTTCGTTAAAT
TGTGTTGAAGTGAACTCAGAATCTGTACTTTACATCTCAGGTAATATCAA
ATGCTTTCAAGGATGGCAGTATGCTGTCGCTTTACTACTGTTCCTATGGA
TTATTCCCTTCCCAGCGGCTCTTGTTTATTCATATAAGCTATTCGATCGA
GGCTTAATTAgcgagaaaatgtttttgttgagCTTATGCTTTCCGGCTCT
TTCCGTatactttttcatcaaatacCGGAACAGTCATGACGGACGCTTCA
TAGAGCGACATGGACTAAAGGCTGTCTTGTACGATATATTTGAAGAGCCA
TACCGGGTTATTTCCGTAAACGAATTCGGTGTACCGGCCACAATGTACTG
GTGGAACGCGTGGCGCTTATACGAACGTCTTATTATTGTCGTTCTAGTGA
ACTTCTTTATTGAGCCGTTGCTTCGAATGTGTGTCATAGCCCCTATTATG
ATATTCCTATTGATGTTACACTATCATGTCAGACCGTATAAAGAGACAAT
GACTCTACTATCGTGGCTTGATATTTCGTCATTCGCCTGTTTGTCGTTTT
ACGTCGTTGATAACATGTTCCGGTCGTTTGCTTACATTTTTGATATACCG
TTGAAAAACCAAATTGCGAAAGCTTTGACAGTGTTGGAAATTTTCGAAGC
GATTTTAACACCTTTGACTGTCATTTGTATCTTTATTGTGACTTTTGGCT
TTGAAGCTGTTTATGAATTCACTAggaatttggccaaaaaaactacgtga
ttttgttttaaaataatttagttTTTGGTGAACTATCTATAATTCGCTTT
CTAGTATTCTCTTACTCTTTAAATACTTTAACGATACAAACTGGGGAATT
TCGT Run BLAST on NCBI protein sequence of TCONS_00007264-protein >TCONS_00007264-protein ID=TCONS_00007264-protein|Name=TCONS_00007264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1239bp
MGIAMLLLSLFALSLTGVICSEVFISQSTGIDSLNCGTSQLPCKSIEFAL
KKDDQISVLSLMESYRSIGPIAISGNQILIRRATQVKSPITLSFNGISLF
NYENTTTNSSLRFSFQNLELNNVTLFSDETVNTNVYFTINDCTIQGSKPI
IKTLPNRNQTKTNDFLAIDIRNSTIDISGYIIQHSAASLLKINIQDSSIL
TGAIFTNTSLNLNIHNTRFEGGVTSRQQTTQAKILEISGNPQQTLINLTN
IEITGNHFRKTFLHCKNSDIYIHNISLRDCKIGQLFDFTDVTSIIEGGIS
LIGVQSEGAYLIDTKKSIVKFTGLVNLLDSHAKLLKGQQKSHLIFDHLQV
IDTVAEHILMQLAHSQMTVRELKLQRHHCTHTAVFIQNSNVTIENAEILN
SKFQFGFFLFSNSRLIINRGRYLENEVSTNFWGIAGSHIALYNTEFHKNK
GWQGHKLAMNNIIAAEQKSNVIFKNINITENAYFSGIKASSSNMDLNYIN
FVDNRAYSHGKTVIYEGETCDQSFNISIQNIFARITNQQDFEHMSAIFSI
DIIHSALILDNVVIDVQSMSYPQISTLHLRFATLNTKVLQNPNNTAYIVK
CPPSYNPSGIPKLQFDFYSYTLLCIPCSRGTYTLARGSESLRYIDNVDWD
VETWKNNDRTFDVKDFTHVQGCTACPAGGNCTFGIKSQGNYYGQIKKETE
ESEEVEFIPCPSFYCCSNLQKTCQNITSCNTNRKGTLCGSCEDGFFENYF
YPTCISNNECTAVKMRRFWLVYTATAFVLTILIFSIKDLSYFLAGVALYL
KVKLTALQKKFMKTRSLERYKKTPGSINYNGHQIINDCLAEPEKPRRFIF
SAVLQITLAFFQIVSLIKLRNQSNTSKTMTRIFDLFNLQIALDEAEIVCP
FESMNVVWKYFIKNVLFIICMVMFLIIATLINQFIRLFKCKSICKSKSFE
YFSPPEHQRLNFLDKLVVCYTKVLAFGYKNISLFAIISLNCVEVNSESVL
YISGNIKCFQGWQYAVALLLFLWIIPFPAALVYSYKLFDRGLISEKMFLL
SLCFPALSVYFFIKYRNSHDGRFIERHGLKAVLYDIFEEPYRVISVNEFG
VPATMYWWNAWRLYERLIIVVLVNFFIEPLLRMCVIAPIMIFLLMLHYHV
RPYKETMTLLSWLDISSFACLSFYVVDNMFRSFAYIFDIPLKNQIAKALT
VLEIFEAILTPLTVICIFIVTFGFEAVYEFTRNLAKKTT Run BLAST on NCBI transcript from alignment at sc0000075:502756..509412+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007264 ID=TCONS_00007264|Name=TCONS_00007264|organism=Clytia hemisphaerica|type=transcript|length=6657bp|location=Sequence derived from alignment at sc0000075:502756..509412+ (Clytia hemisphaerica)
CAACGCCATAAAAGAgaagaaaacaattttcaattaatttgttATTGTGT
TGTTACGAGTTCAGTTCTAGAGAAAGGAATTAATACCATGCTAGTCAGCA
TGCTGTGATGAGCACATTTTATACGAAGATCCTTAGGGCTGGAACAAATT
GATAAAGAAGGACCATATTGTTGAAGAAAAATGGGAATTGCAATGTTATT
GTTGAGCTTGTTTGCTTTATCGTTAACAggtatgtgtttttttttcatag
tcCTCGTTTGAATTAGGAATTTCATTTTGGCGTCACTGTATAACATATAG
TCGGGATAGTCGTTGTCAAGgcaaaggaaaaaaaaatctcaaatcaataT
CTTAGGAAAGTGAGAGTTTTTCTATTACAGGCCCCCCAGCTGtctgcgtg
aatgggctttttcatttgcgtgaatgcgtgaaaatcaaaaaaattgcttg
aatgcgtgaattggaaagctttgcgtgaacaaaaattgcgtgaatttaGG
AAAAAGAATTGCGTGAGGTCTGCTGGGTGGACCTCCTATAAGATAAACCT
TTTAACAACGAGATTTGGCCCTGGGTCATGTGGATGAATCTCTCCTCTAT
AGCACCCCTGTCTAAAGATTTCTATCGAaatttcaatggggatagaNAAT
GTTATTGTTGAGCTTGTTTGCTTTATCGTTAACAggtatgtgtttttttt
ttttttcatagtcCTCATTTGAGTTAGGAATTTCATTTTGCCGTCACTGC
ATAACATATAGTCGGGATAGTCGTTGTCAAggcaaaggaaaaaaaatctc
aaatcaataTCTTAGGAAAGTGAGAGTTTTTCTATTAGAGGCCCCCAGCT
Gtctgcgtgaatgggctttttcatttgcgtgaatgcgtgaaaatcaaaaa
aaattgcttgaatGCATGAATTGGAAAGgtttgcgtgaacaaaaattgcg
tgaattgcgaaaaaaacattgcgtgaattTAGGAAAAAGAATTGCGTGAG
GTCTGCTGGGTGGACCTCCATAAGATAAACCTTTTGACAACGAGATTCGG
CCCTAGGTCATGTGGATGAATCTCTCCTCTATAGCACCACTGTCTAaaga
tttctatcgaaatctcaatggggatagaagttctattgttccaaggttag
aAAATCCAGTGGGGGTGGTTTTCGAGTGCAGTTTTTTAAACATTTGATTT
GGAggggggatgaaatcaaagtaaattttccagtgggactgaaattccat
ggtgttttcccactggggacgaaatttttaataaattttccagtggtgCT
AGGGTCCCAGcggtctgtgacacagaggtGTTCTATAAGATGAAAGGGCC
AATTTTATTGTCAAAGGTTCATTTTATAAAAAGATTCTCAATAAGCCAAG
AAGAGACTCGCATTTTGAGATTGGTCCTTCTGCTTTGACAACGACGATAT
TTAATATTATTTTTCTGTATTTCCATATCACCAATGTTAGAAGGCTCTCC
CTCCTAACCCAGAGAAAAGAGCAAGAGAGAGAGATAGATGAAAGGAGACA
GGAGAGGGAGATGGCAGAGAGAGGATAATTCATTATTGCCAAATTATCAA
ATCTGATCttaagtctattcacgataagtgtgcactaaattttgctttgc
tTGTTATTTCTCAACCAATGCTTCAATCTTAAAAAGCTTGGTATCGTTGG
GAAGGTAGGAAGGAGCTTATTAATTTAGTGTTAGTTTTTTTcgtgaaatt
taaaaagaacatgaataaaaatgaagaagaaaaaattcaacttttaataG
ATAGGTCGTATAAACGTTATTTTTACATCTTCGGAAAGCTTAAAGCttga
caatttcaaaaaatatatactttgactaggaaatataatttgaaatttgc
aataTTCAACAGAATGTAAAGTAAACCACTTTGTCACCCCCGGAATTTTA
CATTGTGTaagaaatttcttttcagaaaaatcagtcaATCTACCTTCCCA
ACGATACCAAGCTTTTTAAGATTGAAGCATTGGTTGAGAAGTAACAagca
aagcaaaatttagtgcacacttatcgtgaatagactttaataagAGAAAT
GAAGATTGTTATGCAAAGGTTTAAAAAGACAACTTGAACTGAACTTGAGT
GGTTAAATCGTTACTTTTGAGAAAGCTCAATGTCACTTGTAAATCTTGAA
AACTACATTTTTCTTATTTGCAATGAATGGTCCTTCCTTTAAATATTGTG
TGTCAAATTCAATGTTAaacttttttgccaaaaaatcaCGAGAGTGAAAA
GGTTAAAAGGTTAACAGTTAAACATATTCGGCGTAATGGTTACAACACAA
CAAAGAGTCAACTCTATTAGAAACTGACATAAAGTATTCCTATCTATTAT
TCAATTCAAGTAAAAATCTCGGGCCAATCCTTAGGATCTTTAGTATCTTT
CATGAGAGGCAACTGcatttgattggttcgaaaaagtagataggatttaa
gatttttttttaaagaggggGCCCGCAGAAGTTGGTggtaaattatttta
tttttcgctAAATTCAACTTTATGAGTAATCGTCTATTTTGGTTATTGAG
GTTGTTGCTAGACCTTATTGGAAAGTATCTTTAAAAACTAATaatatttt
tgagttttgaacCATTCACATGCGGTTATGTAGCACGAAGCATGATGCGG
TTCCTAAGGTTTGGCCTGCTACTAATATTCAGACTTAAATAAGGCTAATA
CACCCACCGAagaaggactgggacggttttagtgggataaagcggacaac
aaatgcccgcgcggcaattggtggctacggtcgaaaggTGTATAAAGATT
ATTTTCTAAAGATTTATCCCATTTACTTTCAGGTGTGATATGCAGCGAAG
TGTTCATATCTCAATCGACCGGTATTGATTCACTCAACTGTGGTACATCA
CAATTGCCATGCAAAAGCATTGAATTTGCCTTAAAGAAAGATGATCAAAT
CTCCGTACTATCTTTAATGGAATCTTACCGTTCGATTGGTCCAATTGCAA
TTTCGggaaatcaaattttgattcGACGCGCTACTCAAGTTAAAAGCCCA
ATAACACTTTCCTTTAACGGTATAAGTTTATTCAACTATGAAAACACTAC
TACTAACAGCAGTCTTCGATTTTCATTCCAAAACTTAGAATTAAACAATG
TAACGTTATTCTCGGATGAAACTGTCAATACCAACGTCTATTTTACAATC
AATGATTGTACCATACAAGGATCAAAACCAATTATCAAGACTTTGCCAAA
TCGAAACCAAActaaaacaaatgatttccTAGCGATTGATATCCGGAATT
CCACCATCGACATCTCAGGCTATATCATTCAACATTCTGCAGCCTCTCTT
CTGAAAATCAACATTCAAGATTCATCCATTTTGACCGGAGCTATCTTCAC
CAACACTTCATTGAACCTTAACATTCATAACACTCGTTTTGAAGGAGGAG
TTACGAGTAGGCAGCAAACCACACAGGCCAAGATTCTCGAAATATCTGGT
AATCCTCAACAGACCTTGATCAACTTAACCAACATTGAAATCACCGGGAA
CCACTTTAGAAAGACTTTCCTACATTGTAAAAATAGTGATATTTACATCC
ACAACATTTCCCTTAGAGATTGCAAAATCGGTCAATTATTTGATTTCACT
GATGTTACCAGTATAATTGAAGGTGGAATCTCTTTAATTGGTGTCCAAAG
CGAGGGTGCATATCTTATCGATACTAAAAAATCCATTGTCAAGTTCACTG
GACTTGTTAATCTTTTAGACTCCCATGCAAAGTTATTAAAGGGGCAACag
aaaagtcatttgattttcGATCATCTTCAAGTTATTGACACAGTCGCAGA
ACACATTCTTATGCAGTTGGCACACTCGCAAATGACTGTACGTGAATTGA
AACTCCAGCGTCATCACTGTACTCACACGGcggtttttattcaaaattca
aacGTAACAATCGAAAATgctgaaattttgaactctAAATTCCAGTTTgg
tttcttccttttttccaaCTCTCGTTTAATCATCAACAGGGGACGATATT
TAGAGAATGAAGTATCTACTAATTTCTGGGGAATTGCTGGCTCTCATATT
GCGCTTTATAACACggaatttcataaaaacaaagGCTGGCAAGGGCATAA
ACTGGCTATGAACAATATCATTGCCGCTGAACAAAAGAGTAacgttatct
tcaaaaatataaatatcaCTGAAAATGCTTATTTCTCTGGAATCAAAGCC
TCCTCCTCGAACATGGACTTGAATTACATCAATTTCGTGGACAATCGAGC
TTATTCGCATGGTAAAACCGTGATTTACGAGGGTGAAACTTGTGACCAAT
CTTTCAATATCAGCATTCAGAATATCTTCGCCAGAATCACCAATCAACAA
GACTTTGAACACATGAGCGCTATATTCTCAATTGATATCATCCATTCAGC
TCTAATTTTGGACAATGTTGTTATTGATGTCCAAAGCATGTCATACCCTC
AAATCAGTACACTCCATCTCAGATTCGCAACGTTAAACACGAAGGTGTTA
CAAAATCCTAATAACACGGCGTATATTGTTAAATGCCCACCAAGCTATAA
CCCAAGCGGTATCCCCAAGCTACAGTTTGATTTTTATTCGTACACACTAC
TATGTATACCTTGCTCACGTGGGACATATACGTTGGCACGTGGTTCTGAG
AGCTTAAGATACATCGATAATGTTGATTGGGATGTTGAGACTTGGAAAAA
CAATGACCGGACATTTGACGTTAAAGATTTCACTCACGTCCAGGGCTGTA
CTGCTTGTCCGGCAGGAGGAAATTGCACCTTTGGTATTAAAAGCCAGGGC
AATTATTACGGACAGATAAAAAAAGAGACTGAGGAGAGTGAAGAGGTAGA
GTTTATTCCATGCCCTTCTTTTTATTGCTGTTCAAATTTACAGAAAACAT
GCCAAAATATCACAAGTTGTAATACAAATCGAAAAGGAACACTCTGCGGC
TCATGTGAAGATGGTTtcttcgaaaattatttttacccaACATGCATTTC
GAATAATGAATGCACTGCTGTTAAGATGAGACGATTCTGGCTTGTTTACA
CTGCAACCGCTTTTGTGTtaaccattttgattttcagcaTCAAAGATTTG
AGTTATTTTTTAGCAGGTGTGGCGCTATATCTCAAAGTAAAACTGACCGC
GTTACAAAAGAAATTCATGAAAACACGAAGTCTTGAACGTTATAAGAAAA
CACCTGGTTCGATTAATTACAATGGTCATCAAATTATCAACGACTGTCTA
GCAGAGCCTGAAAAACCAAGACGTTTTATTTTCTCCGCGGTTCTACAAAT
CACCTTAGCATTTTTCCAGATCGTTAGTTTAATCAAGTTACGTAACCAAT
CGAATACGAGTAAAACCATGACCCGAATCTTCGACTTGTTCAATTTACAG
ATCGCGTTAGATGAAGCTGAAATTGTATGTCCATTTGAATCTATGAATGT
TGTTTGgaaatatttcatcaaaaatgttcttttcaTCATCTGTATGGTCA
TGTTTCTCATCATCGCTACCCTCATCAACCAATTCATCCGATTATTCAAA
TGTAAAAGTATATGCAAATCGAaaagttttgaatatttttcaccACCAGA
ACATCAACGTCTAAACTTTTTGGATAAACTTGTGGTTTGTTATACCAAAG
TTCTTGCGTTTGGGTACAAGAACATTTCATTATTTGCTATCATTTCGTTA
AATTGTGTTGAAGTGAACTCAGAATCTGTACTTTACATCTCAGGTAATAT
CAAATGCTTTCAAGGATGGCAGTATGCTGTCGCTTTACTACTGTTCCTAT
GGATTATTCCCTTCCCAGCGGCTCTTGTTTATTCATATAAGCTATTCGAT
CGAGGCTTAATTAgcgagaaaatgtttttgttgagCTTATGCTTTCCGGC
TCTTTCCGTatactttttcatcaaatacCGGAACAGTCATGACGGACGCT
TCATAGAGCGACATGGACTAAAGGCTGTCTTGTACGATATATTTGAAGAG
CCATACCGGGTTATTTCCGTAAACGAATTCGGTGTACCGGCCACAATGTA
CTGGTGGAACGCGTGGCGCTTATACGAACGTCTTATTATTGTCGTTCTAG
TGAACTTCTTTATTGAGCCGTTGCTTCGAATGTGTGTCATAGCCCCTATT
ATGATATTCCTATTGATGTTACACTATCATGTCAGACCGTATAAAGAGAC
AATGACTCTACTATCGTGGCTTGATATTTCGTCATTCGCCTGTTTGTCGT
TTTACGTCGTTGATAACATGTTCCGGTCGTTTGCTTACATTTTTGATATA
CCGTTGAAAAACCAAATTGCGAAAGCTTTGACAGTGTTGGAAATTTTCGA
AGCGATTTTAACACCTTTGACTGTCATTTGTATCTTTATTGTGACTTTTG
GCTTTGAAGCTGTTTATGAATTCACTAggaatttggccaaaaaaactacg
tgattttgttttaaaataatttagttTTTGGTGAACTATCTATAATTCGC
TTTCTAGTATTCTCTTACTCTTTAAATACTTTAACGATACAAACTGGGGA
ATTTCGT Coding sequence (CDS) from alignment at sc0000075:502756..509412+ >TCONS_00007264 ID=TCONS_00007264|Name=TCONS_00007264|organism=Clytia hemisphaerica|type=CDS|length=3720bp|location=Sequence derived from alignment at sc0000075:502756..509412+ (Clytia hemisphaerica)
ATGGGAATTGCAATGTTATTGTTGAGCTTGTTTGCTTTATCGTTAACAgG
TGTGATATGCAGCGAAGTGTTCATATCTCAATCGACCGGTATTGATTCAC
TCAACTGTGGTACATCACAATTGCCATGCAAAAGCATTGAATTTGCCTTA
AAGAAAGATGATCAAATCTCCGTACTATCTTTAATGGAATCTTACCGTTC
GATTGGTCCAATTGCAATTTCGggaaatcaaattttgattcGACGCGCTA
CTCAAGTTAAAAGCCCAATAACACTTTCCTTTAACGGTATAAGTTTATTC
AACTATGAAAACACTACTACTAACAGCAGTCTTCGATTTTCATTCCAAAA
CTTAGAATTAAACAATGTAACGTTATTCTCGGATGAAACTGTCAATACCA
ACGTCTATTTTACAATCAATGATTGTACCATACAAGGATCAAAACCAATT
ATCAAGACTTTGCCAAATCGAAACCAAActaaaacaaatgatttccTAGC
GATTGATATCCGGAATTCCACCATCGACATCTCAGGCTATATCATTCAAC
ATTCTGCAGCCTCTCTTCTGAAAATCAACATTCAAGATTCATCCATTTTG
ACCGGAGCTATCTTCACCAACACTTCATTGAACCTTAACATTCATAACAC
TCGTTTTGAAGGAGGAGTTACGAGTAGGCAGCAAACCACACAGGCCAAGA
TTCTCGAAATATCTGGTAATCCTCAACAGACCTTGATCAACTTAACCAAC
ATTGAAATCACCGGGAACCACTTTAGAAAGACTTTCCTACATTGTAAAAA
TAGTGATATTTACATCCACAACATTTCCCTTAGAGATTGCAAAATCGGTC
AATTATTTGATTTCACTGATGTTACCAGTATAATTGAAGGTGGAATCTCT
TTAATTGGTGTCCAAAGCGAGGGTGCATATCTTATCGATACTAAAAAATC
CATTGTCAAGTTCACTGGACTTGTTAATCTTTTAGACTCCCATGCAAAGT
TATTAAAGGGGCAACagaaaagtcatttgattttcGATCATCTTCAAGTT
ATTGACACAGTCGCAGAACACATTCTTATGCAGTTGGCACACTCGCAAAT
GACTGTACGTGAATTGAAACTCCAGCGTCATCACTGTACTCACACGGcgg
tttttattcaaaattcaaacGTAACAATCGAAAATgctgaaattttgaac
tctAAATTCCAGTTTggtttcttccttttttccaaCTCTCGTTTAATCAT
CAACAGGGGACGATATTTAGAGAATGAAGTATCTACTAATTTCTGGGGAA
TTGCTGGCTCTCATATTGCGCTTTATAACACggaatttcataaaaacaaa
gGCTGGCAAGGGCATAAACTGGCTATGAACAATATCATTGCCGCTGAACA
AAAGAGTAacgttatcttcaaaaatataaatatcaCTGAAAATGCTTATT
TCTCTGGAATCAAAGCCTCCTCCTCGAACATGGACTTGAATTACATCAAT
TTCGTGGACAATCGAGCTTATTCGCATGGTAAAACCGTGATTTACGAGGG
TGAAACTTGTGACCAATCTTTCAATATCAGCATTCAGAATATCTTCGCCA
GAATCACCAATCAACAAGACTTTGAACACATGAGCGCTATATTCTCAATT
GATATCATCCATTCAGCTCTAATTTTGGACAATGTTGTTATTGATGTCCA
AAGCATGTCATACCCTCAAATCAGTACACTCCATCTCAGATTCGCAACGT
TAAACACGAAGGTGTTACAAAATCCTAATAACACGGCGTATATTGTTAAA
TGCCCACCAAGCTATAACCCAAGCGGTATCCCCAAGCTACAGTTTGATTT
TTATTCGTACACACTACTATGTATACCTTGCTCACGTGGGACATATACGT
TGGCACGTGGTTCTGAGAGCTTAAGATACATCGATAATGTTGATTGGGAT
GTTGAGACTTGGAAAAACAATGACCGGACATTTGACGTTAAAGATTTCAC
TCACGTCCAGGGCTGTACTGCTTGTCCGGCAGGAGGAAATTGCACCTTTG
GTATTAAAAGCCAGGGCAATTATTACGGACAGATAAAAAAAGAGACTGAG
GAGAGTGAAGAGGTAGAGTTTATTCCATGCCCTTCTTTTTATTGCTGTTC
AAATTTACAGAAAACATGCCAAAATATCACAAGTTGTAATACAAATCGAA
AAGGAACACTCTGCGGCTCATGTGAAGATGGTTtcttcgaaaattatttt
tacccaACATGCATTTCGAATAATGAATGCACTGCTGTTAAGATGAGACG
ATTCTGGCTTGTTTACACTGCAACCGCTTTTGTGTtaaccattttgattt
tcagcaTCAAAGATTTGAGTTATTTTTTAGCAGGTGTGGCGCTATATCTC
AAAGTAAAACTGACCGCGTTACAAAAGAAATTCATGAAAACACGAAGTCT
TGAACGTTATAAGAAAACACCTGGTTCGATTAATTACAATGGTCATCAAA
TTATCAACGACTGTCTAGCAGAGCCTGAAAAACCAAGACGTTTTATTTTC
TCCGCGGTTCTACAAATCACCTTAGCATTTTTCCAGATCGTTAGTTTAAT
CAAGTTACGTAACCAATCGAATACGAGTAAAACCATGACCCGAATCTTCG
ACTTGTTCAATTTACAGATCGCGTTAGATGAAGCTGAAATTGTATGTCCA
TTTGAATCTATGAATGTTGTTTGgaaatatttcatcaaaaatgttctttt
caTCATCTGTATGGTCATGTTTCTCATCATCGCTACCCTCATCAACCAAT
TCATCCGATTATTCAAATGTAAAAGTATATGCAAATCGAaaagttttgaa
tatttttcaccACCAGAACATCAACGTCTAAACTTTTTGGATAAACTTGT
GGTTTGTTATACCAAAGTTCTTGCGTTTGGGTACAAGAACATTTCATTAT
TTGCTATCATTTCGTTAAATTGTGTTGAAGTGAACTCAGAATCTGTACTT
TACATCTCAGGTAATATCAAATGCTTTCAAGGATGGCAGTATGCTGTCGC
TTTACTACTGTTCCTATGGATTATTCCCTTCCCAGCGGCTCTTGTTTATT
CATATAAGCTATTCGATCGAGGCTTAATTAgcgagaaaatgtttttgttg
agCTTATGCTTTCCGGCTCTTTCCGTatactttttcatcaaatacCGGAA
CAGTCATGACGGACGCTTCATAGAGCGACATGGACTAAAGGCTGTCTTGT
ACGATATATTTGAAGAGCCATACCGGGTTATTTCCGTAAACGAATTCGGT
GTACCGGCCACAATGTACTGGTGGAACGCGTGGCGCTTATACGAACGTCT
TATTATTGTCGTTCTAGTGAACTTCTTTATTGAGCCGTTGCTTCGAATGT
GTGTCATAGCCCCTATTATGATATTCCTATTGATGTTACACTATCATGTC
AGACCGTATAAAGAGACAATGACTCTACTATCGTGGCTTGATATTTCGTC
ATTCGCCTGTTTGTCGTTTTACGTCGTTGATAACATGTTCCGGTCGTTTG
CTTACATTTTTGATATACCGTTGAAAAACCAAATTGCGAAAGCTTTGACA
GTGTTGGAAATTTTCGAAGCGATTTTAACACCTTTGACTGTCATTTGTAT
CTTTATTGTGACTTTTGGCTTTGAAGCTGTTTATGAATTCACTAggaatt
tggccaaaaaaactacgtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007264-exon-sc0000075-1491911889:502756..502984 | TCONS_00007264-exon-sc0000075-1491911889:502756..502984 | Clytia hemisphaerica | exon |
| TCONS_00007264-exon-sc0000075-1510915933:502756..502984 | TCONS_00007264-exon-sc0000075-1510915933:502756..502984 | Clytia hemisphaerica | exon |
| TCONS_00007264-exon-sc0000075-1575043694:502756..502984 | TCONS_00007264-exon-sc0000075-1575043694:502756..502984 | Clytia hemisphaerica | exon |
| TCONS_00007264-exon-sc0000075-1491911889:505638..509412 | TCONS_00007264-exon-sc0000075-1491911889:505638..509412 | Clytia hemisphaerica | exon |
| TCONS_00007264-exon-sc0000075-1510915933:505638..509412 | TCONS_00007264-exon-sc0000075-1510915933:505638..509412 | Clytia hemisphaerica | exon |
| TCONS_00007264-exon-sc0000075-1575043694:505638..509412 | TCONS_00007264-exon-sc0000075-1575043694:505638..509412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:502756..509412 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011050 | Pectin_lyase_fold/virulence |
Blast
The following BLAST results are available for this feature:
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