XLOC_004081 (gene) - C. hemisphaerica

Overview
NameXLOC_004081
Unique NameXLOC_004081
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000075:502756..509412+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004081 ID=XLOC_004081|Name=XLOC_004081|organism=Clytia hemisphaerica|type=gene|length=6657bp|location=Sequence derived from alignment at sc0000075:502756..509412+ (Clytia hemisphaerica)
CAACGCCATAAAAGAgaagaaaacaattttcaattaatttgttATTGTGT TGTTACGAGTTCAGTTCTAGAGAAAGGAATTAATACCATGCTAGTCAGCA TGCTGTGATGAGCACATTTTATACGAAGATCCTTAGGGCTGGAACAAATT GATAAAGAAGGACCATATTGTTGAAGAAAAATGGGAATTGCAATGTTATT GTTGAGCTTGTTTGCTTTATCGTTAACAggtatgtgtttttttttcatag tcCTCGTTTGAATTAGGAATTTCATTTTGGCGTCACTGTATAACATATAG TCGGGATAGTCGTTGTCAAGgcaaaggaaaaaaaaatctcaaatcaataT CTTAGGAAAGTGAGAGTTTTTCTATTACAGGCCCCCCAGCTGtctgcgtg aatgggctttttcatttgcgtgaatgcgtgaaaatcaaaaaaattgcttg aatgcgtgaattggaaagctttgcgtgaacaaaaattgcgtgaatttaGG AAAAAGAATTGCGTGAGGTCTGCTGGGTGGACCTCCTATAAGATAAACCT TTTAACAACGAGATTTGGCCCTGGGTCATGTGGATGAATCTCTCCTCTAT AGCACCCCTGTCTAAAGATTTCTATCGAaatttcaatggggatagaNAAT GTTATTGTTGAGCTTGTTTGCTTTATCGTTAACAggtatgtgtttttttt ttttttcatagtcCTCATTTGAGTTAGGAATTTCATTTTGCCGTCACTGC ATAACATATAGTCGGGATAGTCGTTGTCAAggcaaaggaaaaaaaatctc aaatcaataTCTTAGGAAAGTGAGAGTTTTTCTATTAGAGGCCCCCAGCT Gtctgcgtgaatgggctttttcatttgcgtgaatgcgtgaaaatcaaaaa aaattgcttgaatGCATGAATTGGAAAGgtttgcgtgaacaaaaattgcg tgaattgcgaaaaaaacattgcgtgaattTAGGAAAAAGAATTGCGTGAG GTCTGCTGGGTGGACCTCCATAAGATAAACCTTTTGACAACGAGATTCGG CCCTAGGTCATGTGGATGAATCTCTCCTCTATAGCACCACTGTCTAaaga tttctatcgaaatctcaatggggatagaagttctattgttccaaggttag aAAATCCAGTGGGGGTGGTTTTCGAGTGCAGTTTTTTAAACATTTGATTT GGAggggggatgaaatcaaagtaaattttccagtgggactgaaattccat ggtgttttcccactggggacgaaatttttaataaattttccagtggtgCT AGGGTCCCAGcggtctgtgacacagaggtGTTCTATAAGATGAAAGGGCC AATTTTATTGTCAAAGGTTCATTTTATAAAAAGATTCTCAATAAGCCAAG AAGAGACTCGCATTTTGAGATTGGTCCTTCTGCTTTGACAACGACGATAT TTAATATTATTTTTCTGTATTTCCATATCACCAATGTTAGAAGGCTCTCC CTCCTAACCCAGAGAAAAGAGCAAGAGAGAGAGATAGATGAAAGGAGACA GGAGAGGGAGATGGCAGAGAGAGGATAATTCATTATTGCCAAATTATCAA ATCTGATCttaagtctattcacgataagtgtgcactaaattttgctttgc tTGTTATTTCTCAACCAATGCTTCAATCTTAAAAAGCTTGGTATCGTTGG GAAGGTAGGAAGGAGCTTATTAATTTAGTGTTAGTTTTTTTcgtgaaatt taaaaagaacatgaataaaaatgaagaagaaaaaattcaacttttaataG ATAGGTCGTATAAACGTTATTTTTACATCTTCGGAAAGCTTAAAGCttga caatttcaaaaaatatatactttgactaggaaatataatttgaaatttgc aataTTCAACAGAATGTAAAGTAAACCACTTTGTCACCCCCGGAATTTTA CATTGTGTaagaaatttcttttcagaaaaatcagtcaATCTACCTTCCCA ACGATACCAAGCTTTTTAAGATTGAAGCATTGGTTGAGAAGTAACAagca aagcaaaatttagtgcacacttatcgtgaatagactttaataagAGAAAT GAAGATTGTTATGCAAAGGTTTAAAAAGACAACTTGAACTGAACTTGAGT GGTTAAATCGTTACTTTTGAGAAAGCTCAATGTCACTTGTAAATCTTGAA AACTACATTTTTCTTATTTGCAATGAATGGTCCTTCCTTTAAATATTGTG TGTCAAATTCAATGTTAaacttttttgccaaaaaatcaCGAGAGTGAAAA GGTTAAAAGGTTAACAGTTAAACATATTCGGCGTAATGGTTACAACACAA CAAAGAGTCAACTCTATTAGAAACTGACATAAAGTATTCCTATCTATTAT TCAATTCAAGTAAAAATCTCGGGCCAATCCTTAGGATCTTTAGTATCTTT CATGAGAGGCAACTGcatttgattggttcgaaaaagtagataggatttaa gatttttttttaaagaggggGCCCGCAGAAGTTGGTggtaaattatttta tttttcgctAAATTCAACTTTATGAGTAATCGTCTATTTTGGTTATTGAG GTTGTTGCTAGACCTTATTGGAAAGTATCTTTAAAAACTAATaatatttt tgagttttgaacCATTCACATGCGGTTATGTAGCACGAAGCATGATGCGG TTCCTAAGGTTTGGCCTGCTACTAATATTCAGACTTAAATAAGGCTAATA CACCCACCGAagaaggactgggacggttttagtgggataaagcggacaac aaatgcccgcgcggcaattggtggctacggtcgaaaggTGTATAAAGATT ATTTTCTAAAGATTTATCCCATTTACTTTCAGGTGTGATATGCAGCGAAG TGTTCATATCTCAATCGACCGGTATTGATTCACTCAACTGTGGTACATCA CAATTGCCATGCAAAAGCATTGAATTTGCCTTAAAGAAAGATGATCAAAT CTCCGTACTATCTTTAATGGAATCTTACCGTTCGATTGGTCCAATTGCAA TTTCGggaaatcaaattttgattcGACGCGCTACTCAAGTTAAAAGCCCA ATAACACTTTCCTTTAACGGTATAAGTTTATTCAACTATGAAAACACTAC TACTAACAGCAGTCTTCGATTTTCATTCCAAAACTTAGAATTAAACAATG TAACGTTATTCTCGGATGAAACTGTCAATACCAACGTCTATTTTACAATC AATGATTGTACCATACAAGGATCAAAACCAATTATCAAGACTTTGCCAAA TCGAAACCAAActaaaacaaatgatttccTAGCGATTGATATCCGGAATT CCACCATCGACATCTCAGGCTATATCATTCAACATTCTGCAGCCTCTCTT CTGAAAATCAACATTCAAGATTCATCCATTTTGACCGGAGCTATCTTCAC CAACACTTCATTGAACCTTAACATTCATAACACTCGTTTTGAAGGAGGAG TTACGAGTAGGCAGCAAACCACACAGGCCAAGATTCTCGAAATATCTGGT AATCCTCAACAGACCTTGATCAACTTAACCAACATTGAAATCACCGGGAA CCACTTTAGAAAGACTTTCCTACATTGTAAAAATAGTGATATTTACATCC ACAACATTTCCCTTAGAGATTGCAAAATCGGTCAATTATTTGATTTCACT GATGTTACCAGTATAATTGAAGGTGGAATCTCTTTAATTGGTGTCCAAAG CGAGGGTGCATATCTTATCGATACTAAAAAATCCATTGTCAAGTTCACTG GACTTGTTAATCTTTTAGACTCCCATGCAAAGTTATTAAAGGGGCAACag aaaagtcatttgattttcGATCATCTTCAAGTTATTGACACAGTCGCAGA ACACATTCTTATGCAGTTGGCACACTCGCAAATGACTGTACGTGAATTGA AACTCCAGCGTCATCACTGTACTCACACGGcggtttttattcaaaattca aacGTAACAATCGAAAATgctgaaattttgaactctAAATTCCAGTTTgg tttcttccttttttccaaCTCTCGTTTAATCATCAACAGGGGACGATATT TAGAGAATGAAGTATCTACTAATTTCTGGGGAATTGCTGGCTCTCATATT GCGCTTTATAACACggaatttcataaaaacaaagGCTGGCAAGGGCATAA ACTGGCTATGAACAATATCATTGCCGCTGAACAAAAGAGTAacgttatct tcaaaaatataaatatcaCTGAAAATGCTTATTTCTCTGGAATCAAAGCC TCCTCCTCGAACATGGACTTGAATTACATCAATTTCGTGGACAATCGAGC TTATTCGCATGGTAAAACCGTGATTTACGAGGGTGAAACTTGTGACCAAT CTTTCAATATCAGCATTCAGAATATCTTCGCCAGAATCACCAATCAACAA GACTTTGAACACATGAGCGCTATATTCTCAATTGATATCATCCATTCAGC TCTAATTTTGGACAATGTTGTTATTGATGTCCAAAGCATGTCATACCCTC AAATCAGTACACTCCATCTCAGATTCGCAACGTTAAACACGAAGGTGTTA CAAAATCCTAATAACACGGCGTATATTGTTAAATGCCCACCAAGCTATAA CCCAAGCGGTATCCCCAAGCTACAGTTTGATTTTTATTCGTACACACTAC TATGTATACCTTGCTCACGTGGGACATATACGTTGGCACGTGGTTCTGAG AGCTTAAGATACATCGATAATGTTGATTGGGATGTTGAGACTTGGAAAAA CAATGACCGGACATTTGACGTTAAAGATTTCACTCACGTCCAGGGCTGTA CTGCTTGTCCGGCAGGAGGAAATTGCACCTTTGGTATTAAAAGCCAGGGC AATTATTACGGACAGATAAAAAAAGAGACTGAGGAGAGTGAAGAGGTAGA GTTTATTCCATGCCCTTCTTTTTATTGCTGTTCAAATTTACAGAAAACAT GCCAAAATATCACAAGTTGTAATACAAATCGAAAAGGAACACTCTGCGGC TCATGTGAAGATGGTTtcttcgaaaattatttttacccaACATGCATTTC GAATAATGAATGCACTGCTGTTAAGATGAGACGATTCTGGCTTGTTTACA CTGCAACCGCTTTTGTGTtaaccattttgattttcagcaTCAAAGATTTG AGTTATTTTTTAGCAGGTGTGGCGCTATATCTCAAAGTAAAACTGACCGC GTTACAAAAGAAATTCATGAAAACACGAAGTCTTGAACGTTATAAGAAAA CACCTGGTTCGATTAATTACAATGGTCATCAAATTATCAACGACTGTCTA GCAGAGCCTGAAAAACCAAGACGTTTTATTTTCTCCGCGGTTCTACAAAT CACCTTAGCATTTTTCCAGATCGTTAGTTTAATCAAGTTACGTAACCAAT CGAATACGAGTAAAACCATGACCCGAATCTTCGACTTGTTCAATTTACAG ATCGCGTTAGATGAAGCTGAAATTGTATGTCCATTTGAATCTATGAATGT TGTTTGgaaatatttcatcaaaaatgttcttttcaTCATCTGTATGGTCA TGTTTCTCATCATCGCTACCCTCATCAACCAATTCATCCGATTATTCAAA TGTAAAAGTATATGCAAATCGAaaagttttgaatatttttcaccACCAGA ACATCAACGTCTAAACTTTTTGGATAAACTTGTGGTTTGTTATACCAAAG TTCTTGCGTTTGGGTACAAGAACATTTCATTATTTGCTATCATTTCGTTA AATTGTGTTGAAGTGAACTCAGAATCTGTACTTTACATCTCAGGTAATAT CAAATGCTTTCAAGGATGGCAGTATGCTGTCGCTTTACTACTGTTCCTAT GGATTATTCCCTTCCCAGCGGCTCTTGTTTATTCATATAAGCTATTCGAT CGAGGCTTAATTAgcgagaaaatgtttttgttgagCTTATGCTTTCCGGC TCTTTCCGTatactttttcatcaaatacCGGAACAGTCATGACGGACGCT TCATAGAGCGACATGGACTAAAGGCTGTCTTGTACGATATATTTGAAGAG CCATACCGGGTTATTTCCGTAAACGAATTCGGTGTACCGGCCACAATGTA CTGGTGGAACGCGTGGCGCTTATACGAACGTCTTATTATTGTCGTTCTAG TGAACTTCTTTATTGAGCCGTTGCTTCGAATGTGTGTCATAGCCCCTATT ATGATATTCCTATTGATGTTACACTATCATGTCAGACCGTATAAAGAGAC AATGACTCTACTATCGTGGCTTGATATTTCGTCATTCGCCTGTTTGTCGT TTTACGTCGTTGATAACATGTTCCGGTCGTTTGCTTACATTTTTGATATA CCGTTGAAAAACCAAATTGCGAAAGCTTTGACAGTGTTGGAAATTTTCGA AGCGATTTTAACACCTTTGACTGTCATTTGTATCTTTATTGTGACTTTTG GCTTTGAAGCTGTTTATGAATTCACTAggaatttggccaaaaaaactacg tgattttgttttaaaataatttagttTTTGGTGAACTATCTATAATTCGC TTTCTAGTATTCTCTTACTCTTTAAATACTTTAACGATACAAACTGGGGA ATTTCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007264TCONS_00007264Clytia hemisphaericatranscript
TCONS_00007265TCONS_00007265Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:502756..509412 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0 0.09 0.04 0.08 0.18 0.81 0.95 0.15 0.41 0.26 0.16 3.72 3.69 3.17 5.57 1.56 2.28 0.35 0.64 0.05 0.04 0.06 0.11 0.01 0.08 0.16 0.06 0.11 0.09