TCONS_00007275 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007275
Unique Name	TCONS_00007275
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2769

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000075:689837..699053+

transcript sequence

>TCONS_00007275 ID=TCONS_00007275|Name=TCONS_00007275|organism=Clytia hemisphaerica|type=transcript|length=2769bp
GCCAGGAGCTGTTTTCACCGAACGAGATGTTTGATTGAAACGTTTATCAT
TTTTAAACAGATTATACAAACGGTTGAAACAGAACGTTCTGTTTGCGTTT
CTCTTATAAACCCTGTTTATTGTTGGTTTATATCGTTtggttattttatt
tttgaatattaaaaattgaaaaaataaataaaaacaggttttgttgtttt
gttgttgttgcttaTTGGTGCTTATTTTCCTCCTTTCCTGAAAATCTTTT
AGGCACTTGTAATCATGAGAAAGAGTAAAGAAAACGATGCATCGGCACGT
GGTCCGGTCATCAACGGCGTACGTCGGCCGCCAAGACCTTTACATCAAAA
CAACACAAAAGAATCACCTATCCTGTCAGAAAAGAAAGAATCAATCGACC
AAAACAAATCATCAAAGACACCAAGAGAGAAATATACCAGGTCTTCATCC
TACGAAAAACACCAACAAAATCAAGAAATCCGAGCGTCGTACGACCCATC
CGGGCGCGCGCTTCAAACAGATGTTGTTCCACAATATAATCCAATCGCAA
TGCTAGAGGACGGTCAAGCAGTTCGTTCCGTATGCTTTCACCCGTCCGGA
CAATTACACGCTATCGGAGCGAATTCCAAAATCTTCCGGATCTGTAAAAC
TACCACGGTCAGCAGGCCTGAATCTGCTTCAAGGAATGGAGGAGTATCAA
CGATGCAGGTCGTATTCAGTCGTAACAAATATCACCGTGGTTCAATATAC
TGCATGTCTTGGGATCCCGAAGGTCGATTCATCGCCACAGGATCTAATGA
TAAGACTATCAAACTCATTCAATTTGACCCGCACAATTACACTCAGATCG
GCGATGATACTGAATTCAATATTCATTCGGGAACTGTCCGGGAACTAGCC
TTTGTACCGAATCGAAATGGTTATCTAATCTCTGGTGGAGCAGGTTCTGG
AAGTGTTAACATCACAGATGTCAACGCTCAGAAAGTAGTCGGAACATTCG
ATGGTCATTCCGGAAATATCTTGACAGTATACGTCGGAGAAGCTGGTGAT
CTTGTGGCGACCGGTGGAAGCGATAACACATTACGATTGTGGGATTTGAG
ATCTCAGCGATGCATCGACGTGATCGTTGTCGGTGAAAGTAGTCCAGCGT
CGGTCGCGTTGAGCGGACAAAACAGCTATGTAGCATCAGGACAAGAAGAT
GGTAGCATTTTACTTTATGATATCACCGCTGGTCGAACTTTACACACGAT
GCGACTCCACAAGAACGATTGTCGTAGCGTGCGTTTCTCGCCCGATTCAA
ATTACCTGATGACAGCATCGTATGACGCGTCGATCTCTTTAATGCACATA
CGCGCGGACCTTGAATGGAATCCACCAAGACATTATTCGGTAGCTCAACA
TGTTGATAAAGTGATTCAATGTCGTTGGCATCCTCATGAGAATTTATTGT
TATCTTCGTCTGCGGATAGAACGTCTATTCTATGGAAAGGTTCTGATTTA
TAACGTTgtgatttgtcaaaaaaaacttcaatttaACGTCGgtacgttga
aacaacgtcacAATTTAACGTCGgtacgttgaaacaacgtcacAATTTAA
CGCCGgtacgttgaaacaacgtcatTGTGTAATCTAGACTGTTACACTCA
TTCGGTTTTCCAAGTCAGTACAAAAAAACGTCTCCATAATATACGGTACG
TTGGAACAACGTTATGTTTCGTCTAGATTGTTTTATTTATTGGGTAGGGC
GACTGGATAAAAGAATGACATTCTTGACCATTATCGACGCGTAACGTTGC
GTTCTGACCATTCGGAGCATGGTAGGGTCgaattgaaagaaatgaaagcG
CCTATGATCGATTATTGATGGACAAAACACTCCATTAAACATTTAACGAT
ATTTTGCGCCCTTGTGAAGAtattttatattcatttaattTGATCTCAAC
AAAAACGATCAACAAATATTCAATGCTTAAATATCGTAAAATGGCGTGTT
TCACCAGCTCTTGTTTTGAACTCTTTGTTGGAAGTTACGTATACAAGGGT
TAGACGCAATTGCAATAAACATTTTTAGAAGAGATTTCTGGACCTAAAAA
TGACTTAGACGAATTGTTTATCGACAGTAGTAGTAGCaggttaaagattt
tttatcaaacGAAATTTTAAATTATATGTATTTGTAGATTCTTTTATTAA
ATTTGTCCATAAACTCAtatcattttattgtttattatttattttaaaaa
aaaagtcattccttgcaattattttttagtatttgGGGACAGAGAAGTTT
GAAACTTTACTAGTTCTAGAAATGACATCTAAATCGTAGATTTTAAAGCT
TACCAAAAAACTgggtattaaaaaaaaaattaaactgtcGACAGCGTCAA
ACTTAGAGTTAAACTGTCTGTCTACTATAGTGCTTAGAACTGTTTTGTCT
TTATTTTAAGATACTTAGATACCTAGCTAGTTGATAGTAGACTTTTTGAC
TTTAATGTGGTCCCCCAGCGGTTTGATTAATGGCGTGATTGGGCTTTTTT
CCATGAGTTCAAaattcgtgatgcgtgattacGTGACCAAAAACTCCGCT
GAAGGCTATTTTAATTAgagtaaagaagaaaaaatataatatatttaaaT
ACACATTTAACCAGAAATTTTCAAGCTTGTAAAACGAAATGTTTTTTATC
TAAATTattgaacaaaaagaaagatcGGTAGTATGCATTCATGAATATAT
CATTCCCTGGTCACTTGTG

Run BLAST on NCBI

transcript from alignment at sc0000075:689837..699053+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007275 ID=TCONS_00007275|Name=TCONS_00007275|organism=Clytia hemisphaerica|type=transcript|length=9217bp|location=Sequence derived from alignment at sc0000075:689837..699053+ (Clytia hemisphaerica)
GCCAGGAGCTGTTTTCACCGAACGAGATGTTTGATTGAAACGTTTATCAT
TTTTAAACAGATTATACAAACGGTTGAAACAGAACGTTCTGTTTGCGTTT
CTCTTATAAACCCTGTTTATTGTTGGTTTATATCGTTtggttattttatt
tttgaatattaaaaattgaaaaaataaataaaaacaggttttgttgtttt
gttgttgttgcttaTTGGTGCTTATTTTCCTCCTTTCCTGAAAATCTTTT
AGGCACTTGTAATCATGAGAAAGGTATATTGTTACTAAATATGACTTTGT
ATATCAGTATTACAGTATCTTGTAAAACGACGTCGATATCTTTTTATTAG
CCGCAAATGTATATGCAATTTCTCGCTTTTTACCTAACACCTTGCTTCCT
CCAAAAGCCACAAAGTCTAGTTTAAcagagtacacgtttttttttttata
agaacaaactatataagaacataaggcttcgaggcccaaaaatttaagaa
cattctaagaacatactaaggctttggagNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgcaatttcttaa
gaaattacattaaaatgctcaaaaaatgctgaaaataagaacattttaag
aacatttttaggcttcaaatccaaaaaactaagaacatccacatccgaag
gcttcgaaaatttttgacgttcttataaaaaaaaaaacgtgtatcttcaT
CAAAACTCTATGAGAAGTGTGTCTATAAGAAAATCAATGCAATGCCATTT
GACAGACCTTTGGAGTCCATGATAATTCGAACCCAGCTTCCTTACGCTTT
GAGGCTTGATAGGTGTCATGGGATCACCCCCTGGAAGATGGGGGATCAAC
TTTTGCCCTGCAGGGGGAAGTGAATATGTTTTACCTTGATGGGCGACTAA
TGCAAATGGGGGATTTCAGGAAATTTTATGGGGAGTGGAGGTAGAAAGTG
CAAAGATTGGGCATAATATTTCAAATAGATGATTAAATGTGTCTATATTT
GTGCGTACATTGCAGGAAACTGTTATTTTTGTtaagttacacgttttttt
tttattagaacacctaaaatttggctgagcctggatgtgcttattttttt
tagcaattttcagcctaaaatgttcttaaatacgttcttaatttttcaga
ctactctaaatcgacaatatgatacaaaataaggagcacttaaatttggc
aaaatttggacaatatttgactctcgacttttgaagatccacccctaaat
tcggttaaaactgcttaaaaagaggaaaaattgtagtttcttgtcatttt
tttccaaactgaggctgggcatgttctaaagatgttcttatagtagaggg
cattttgtaaaatcgctcgactgttttgttagaagcacttgttatacatt
tttggaaagctaaggggtaggggaatcNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtagagatatattgcaagtatagg
tgatttcagtacctaactcgagatattgaacttcaaaaagcgcaaaaact
ggacaaaatagctgtttctggctgaaaaacacggttttcaagggttaata
tctcgagttaggtacagaaatcaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAAATCaactatacttgcaatatatctctaatcttaatattttgagag
ctttccaaaaatatacaacaggtctccgttttctcgagctaaaattttca
ttatttttttaaccctatgatttttgcctgagaccgtcatatttgtccga
aaatcacaccaaagtgtccgaaaaaaaattggaaacatagtaatttcgat
tccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcccctaccccttagcttt
ccaaaaatgtataacaagtgcttctaacaaaacagtcaagcgattccaaa
aaatcgaacaaaattccccctactattaatTTTTCggcgaatttcagcct
atacgttcttataaactaggttctaataaaaaaaaaacgtgtattatgtA
ATATATAGCGAATCGGTTGgtcacaaaaatattcttccaatAGGGGGCAC
CCCGGAAAAAGGGTAGGTGGGGGAGAAGACCAAGTCTGGGGTTTTAGGCC
CCagatggggggggggttgaaaacCTGGAGGACACCATGGGTGTATTAAA
TATCAGCTCTCTCGGCTTTGATGAGTTTCAccattttttcttctattttt
tctATTAGAGTAAAGAAAACGATGCATCGGCACGTGGTCCGGTCATCAAC
GGCGTACGTCGGCCGCCAAGACCTTTACATCAAAACAACACAAAAGAATC
ACCTATCCTGTCAGAAAAGAAAGGTATGGTGATCTTAGGCTATCGGATAA
AGCTCATGTACTCATTGTGTTCAGGGGGATCACCCAGGTAAAACGGGTTA
TAGAAGATgtgtctttttcaaggtttGAAAATATATCTGAGTGGCTCGCA
AATTCACTGAATTTTGAAAGGTTTATCTTACAGGGTTGACTAATATGGTC
AATTTTAACCACTTTTATgtgttttcgaaaaaaaacacaatattTCACCT
GACAGGGTCCGAATATAATTTATCAGGTCAAAAATTATGTCGGTCGTGGT
CCTAATTTCTTCTGTAAGAGGGTAAAAAGTTGATTTCTGACAGGGTACAT
TTTTCGAACTCCAACGGCACGCGGAGGACAGTAGCCAAATGAGACAATGT
TATGGAATATTCAAGATATGTTAATCTGAAGTAATATTTTCTAGAATCAA
TCGACCAAAACAAATCATCAAAGACACCAAGAGAGAAATATACCAGGTCT
TCATCCTACGAAAAACACCAACAAAATCAAGGTCTGCACGTTTTTCTATT
ATTCTATTGGTTGTTTACTTATCGGAGATAAAATTGTAATACTTTCCAAT
CAATTAATAGGGAGGaattttacaagcttttttgtgaattggttggttgt
taacctgtaataaaaaattttttctattacttcaaataaccaattactAA
AAAcgtattttgaaaaaagctcTAGCTTATCCAACCAAGAGATTTTTTAG
AGAGAAAAacatcatagtcattataaaaaatcccggtctggcaatgtatt
gttttagctttttgttcaaacaaaagacaagttgcggtttgcatactttt
tgatcacgttaccaaaatctcctcttgggattggtttattttccaatcac
atgatcaaaaagttagtaaaataaatagattttggtacgtaagctccatc
ttttaacaataaaaagagacaaaagccttccagaccagtgtttttataat
gactatggtaaAATGATCTCTCTCGTGATACTTTGGTAAACCGATCTGTA
ATTTCTACCCTTTTTTGATAACGTCTAATTCGTATTAACTTTTTAGAAAT
CCGAGCGTCGTACGACCCATCCGGGCGCGCGCTTCAAACAGATGTTGTTC
CACAATATAATCCAATCGCAATGCTAGAGGACGGTCAAGCAGTTCGTTCC
GTATGCTTTCACCCGTCCGGACAATTACACGCTATCGGAGCGAATTCCAA
AATCTTCCGGATCTGTAAAACTACCACGGTCAGCAGGCCTGAATCTGCTT
CAAGGTATTTATTAagatataccgggtgcgccacaaaaaagtttctcttt
ttgAAACTAACTTTCTAGAAGCCCAAAAATCTTAAGAGAACCattccttt
ttcattttagaaagaagaaagataaacttaaattttgatgggtcatttat
taaattcgatccattagatcaaaagttatcctcaattgaataaaaaagtt
actttctgaaagtgctcaaaaacgttaaaaatcgaccttttAGAtcgaaa
tttttagattttgagaaaattagttttgtaaagagaaaaacttttttgtg
gtgcacCTGGTAGTTTACTGATTTACTACTccgacaaaaaaacataattc
ttACCAATGGAttaaatcaacatttttcatcCATGTTCGCTCGCTCAccg
aatttttttaaataatattatAGTTTATAATATAGAAGTTCCTTAACTTA
TTTAGTTTGTCTCAAAGGTATGTTTTGCACTGCTGGAAATATATTTTAGA
GGAGGAAAGTTAAATAGATAAaggtttttgataatttttgaaaatgaaaa
agagaaaaacagatTTTGTGTATAACTTTTGgttatattttaaatatatc
GATGAAGTCAAACATTTTGTTATTTACCCTCTTGCTCTATCTAACAACAT
GTTACAACTAATCTGGACTTGAGCCAATATCTAGGACCAAATCCTtctgg
aattctgaaatttttgTAGTTGTTTTTAAAGCTAAATAGGCCATTTGACA
GTCGCAAAGCGTGGGTAGTCAGGACTACTGCGTgttaatgacgacttact
attggtctaaagttttgaaatttttggaagatttttgcgtctagccaaca
gaaAGCCGTTAAATGatggcgcaatcagtcctgattacccatgatccatt
tcgactgtgaaatggcctataacTATAAGCAACATTTCCaccattttcaa
taaaatttcaaaaatatgaaaaaaaacagccaaatttcaatcaaaaacgA
CATCACCTGGCAAGATTTTGATCCCTGATGAAGATGCGAGTGACAGCAAT
CGATGTACCGAACATAATTGTATAAAAGACGATAAAAAATGAGAATCCAA
TGTCATAAATGCCAACGAACGCTACATTATGCTTGCACTGGACTACCACC
ATACCagttaaatatgtttttaaataaaggttaCCGAAAATACGTGTGTA
TAACTTATTGCTCTTCGGCAAAAGAACTCGGTAGAAAAGTTCATAATCAA
GTGGGAAGAATTAAAAGCTGCACGCACAGCTATAAAGAAATTGAAGCGTG
CGAAAGCATAATAAAAgtcaaaagtgaaagtgaaaatagTCTAAACACAA
TGATCAAAGATTTACAGGCAAGATATCAGGAATACATCAAGGATAAAAAT
CAAGTTACCAATCTAATACAAAGCCAGTTTTCCACGCTAGAAAAAAAACT
AACAGCCAAGATAGAAGAGACGTTGAATAACAAGACTCCAAAAATTCAAA
CCGCAACAGAACCacgaaagaaaagtttttctgGAGCGACTAAAAACAAT
GATCAATAAAGCGTAAATAGCATGAAACAGCTACTACGAAAGGCTGCGAA
AGGAGAAAATTGACGAACAAATTGAGGACCAAAGGAAGCTATCGACAGGC
GCAAATATCATTATCCATGgggtaaatgaaaatgaaaataaagaagatat
CGATTTCGTTACTGAGCTTCTGAATGACGTTAATTTAAAGACTCAACCAA
CCTACGTCTCTCGTATTGAAAAAGAATCTGAAGTTATGCGCCCAATCAAA
GTTGTATTCAAAGACAGTCATAACAAATACAGATTCATGAAGAAGTTGGC
TGAATTGAAACAACACGAGAAGAACGTGAAATTAATTATTACCGACGACT
TGACAAAAATGGAGAGGGAACAAATCAAAGAGTGGAAAAAGAGAGCAGAC
GAGATGAATAAAGCCAGATCGAATGACGATTTTAAATGGAGGGTACGAGG
AAGCCcttgtgaaaaattatattttaagaagattttttgtacaagaacgg
tttagaggcccttgtGCCTGAACTGTAATTCTGGTAATCCTCTATAATaa
tgtttcatagaggtcaatagacctctatattgctataaaataaaataaaa
taaataaaaaagtatctCAAATACGTAAGAGTAGAAATGAATCTCCCATT
GGGGAGGGGTGTGTACCGTTTGTAAAATCCCAATTATTTATTACTCAACG
GTGATAGTAATCATTGACGATTCTTTATTTCAAACTATCTTTTCCAGGAA
TGGAGGAGTATCAACGATGCAGGTCGTATTCAGTCGTAACAAATATCACC
GTGGTTCAATATACTGCATGTCTTGGGATCCCGAAGGTCGATTCATCGCC
ACAGGATCTAATGATAAGACTATCAAACTCATTCAATTTGACCCGCACAA
TTACACTCAGATCGGCGATGATACTGAATTCAATATTCATTCGGGAACTG
TCCGGGAACTAGCCTTTGTACCGAATCGAAATGGTTATCTAATCTCTGGT
GGAGCAGGttcgttttattttgtttacatttttagtAATTCAAATGATAA
TCTAAAGTGTCTTGGTTGTTTTTGCGAGATTAGGCTTCTTTAACATTTAA
TTCTGATAAGGCTAATTTCTTCATCTTTGACAACCGATTTCacctacctt
aaaggaagaaatttgttGGATTTTAGTTAAATCTACCGAACCCACCAAAT
TTTATTTCCGCCAAAATATTTCCCTTTAAGGTATAActttgaaaatcgaa
gaaattgctttttctgttgttttttatttgttggGTAGTTTCAAATATTG
TTCCCTTTTTTAGAAAGTCTCTACCCTCACTTTTAGAATTGAGGAGCGAA
TTATTATGTATGAGTATGTGTTTATTCTCTTTAGGTTCTGGAAGTGTTAA
CATCACAGATGTCAACGCTCAGAAAGTAGTCGGAACATTCGATGGTCATT
CCGGAAATATCTTGACAGTATACGTCGGAGAAGCTGGTGATCTTGTGGCG
ACCGGTGGAAGCGATAACACATTACGATTGTGGGATTTGAGATCTCAGCG
ATGCATCGACGTGATCGTTGTCGGTGAAAGTAGTCCAGCGTCGGTCGCGT
TGAGCGGACAAAACAGCTATGTAGCATCAGGTAATGATACATGTTTTATA
ATACATTGTATGACACAATGAAGAAAGGCAAATAATGACGAATATCTTGT
AATTCGATTACCTATGGAACCACAAAGAACATTCAACTAGACCAGCTTAT
gagaaatctttttgtttaaCTACATTTAGTTTCAACCTAAAATAAGTAGT
CTGTTTAAACTAACTACTAAGGTCTTGAAtagtttttcaaatatttctgt
gGCAATTTACTTAGGAttgcttgaaatattatataaatTGAGCGACAAAA
TTAGATCAGGGTACTGTTTATATGACCCACTTATGCAATTATTCCGAATC
ATTTTAAAATCATGTTTATTATCTTTTCATTTCCCAGGACAAGAAGATGG
TAGCATTTTACTTTATGATATCACCGCTGGTCGAACTTTACACACGATGC
GACTCCACAAGAACGATTGTCGTAGCGTGCGTTTCTCGCCCGATTCAAAT
TACCTGATGACAGCATCGTATGACGCGTCGATCTCTTTAATGCACATACG
CGCGGACCTTGAATGGAATCCACCAAGACATTATTCGGTAGCTCAACATG
TTGATAAAGTGATTCAATGTCGTTGGCATCCTCATGAGAATTTATTGTTA
TCTTCGTCTGCGGATAGAACGTCTATTCTATGGAAAGGTTCTGATTTATA
ACGTTgtgatttgtcaaaaaaaacttcaatttaACGTCGgtacgttgaaa
caacgtcacAATTTAACGTCGgtacgttgaaacaacgtcacAATTTAACG
CCGgtacgttgaaacaacgtcatTGTGTAATCTAGACTGTTACACTCATT
CGGTTTTCCAAGTCAGTACAAAAAAACGTCTCCATAATATACGGTACGTT
GGAACAACGTTATGTTTCGTCTAGATTGTTTTATTTATTGGGTAGGGCGA
CTGGATAAAAGAATGACATTCTTGACCATTATCGACGCGTAACGTTGCGT
TCTGACCATTCGGAGCATGGTAGGGTCgaattgaaagaaatgaaagcGCC
TATGATCGATTATTGATGGACAAAACACTCCATTAAACATTTAACGATAT
TTTGCGCCCTTGTGAAGAtattttatattcatttaattTGATCTCAACAA
AAACGATCAACAAATATTCAATGCTTAAATATCGTAAAATGGCGTGTTTC
ACCAGCTCTTGTTTTGAACTCTTTGTTGGAAGTTACGTATACAAGGGTTA
GACGCAATTGCAATAAACATTTTTAGAAGAGATTTCTGGACCTAAAAATG
ACTTAGACGAATTGTTTATCGACAGTAGTAGTAGCaggttaaagattttt
tatcaaacGAAATTTTAAATTATATGTATTTGTAGATTCTTTTATTAAAT
TTGTCCATAAACTCAtatcattttattgtttattatttattttaaaaaaa
aagtcattccttgcaattattttttagtatttgGGGACAGAGAAGTTTGA
AACTTTACTAGTTCTAGAAATGACATCTAAATCGTAGATTTTAAAGCTTA
CCAAAAAACTgggtattaaaaaaaaaattaaactgtcGACAGCGTCAAAC
TTAGAGTTAAACTGTCTGTCTACTATAGTGCTTAGAACTGTTTTGTCTTT
ATTTTAAGATACTTAGATACCTAGCTAGTTGATAGTAGACTTTTTGACTT
TAATGTGGTCCCCCAGCGGTTTGATTAATGGCGTGATTGGGCTTTTTTCC
ATGAGTTCAAaattcgtgatgcgtgattacGTGACCAAAAACTCCGCTGA
AGGCTATTTTAATTAgagtaaagaagaaaaaatataatatatttaaaTAC
ACATTTAACCAGAAATTTTCAAGCTTGTAAAACGAAATGTTTTTTATCTA
AATTattgaacaaaaagaaagatcGGTAGTATGCATTCATGAATATATCA
TTCCCTGGTCACTTGTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004085	XLOC_004085	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000075	supercontig	sc0000075:689837..699053 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.601536	0.864887	0.552187	0.212776	0	0.344453	13.6354	15.1079	8.53443	6.39598	5.36752	5.7022	12.6308	10.933	7.35999	18.5198	12.0944	9.16107	1.82134	1.15849	8.25794	7.95268	6.66111	6.14367	4.433	7.61709	3.10146	1.92204	0.985199	1.00068

Blast

[Close]

BLAST of TCONS_00007275 vs. Swiss-Prot (Human)
Match: WDR47 (WD repeat-containing protein 47 OS=Homo sapiens GN=WDR47 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 3.161e-76
Identity = 144/325 (44.31%), Postives = 198/325 (60.92%), Query Frame = 1

Query:  532 QYNPIAMLEDGQAVRSVCFHPSGQLHAIGANSKIFRICKTTTVSRPESASRNGGVSTMQVVFSRNKYHRGSIYCMSWDPEGRFIATGSNDKTIKLIQFDPHNYTQIGDDTEFNIHSGTVRELAFV--PNRNG-YLISGGAGSGSVNITDVNAQKVVGTFDGHSGNILTVYVGEAGDLVATGGSDNTLRLWDLRSQRCIDVIVV----GESSPASVALSGQNSYVASGQEDGSILLYDITAGRTLHTMRLHKNDCRSVRFSPDSNYLMTASYDASISLMHIRADLEWNPPRHYSVAQHVDKVIQCRWHPHENLLLSSSADRTSILW 1485
            Q+  I +LED QAVR+V FHP+G L+A+G+NSK  R+C    V  P   S +       V F RNK+H+GSIYC++W P G+ +ATGSNDK +K++ F+       G D EF++H GT+R+LAF+  P   G  LIS GAG  ++  TD    + +    GH+G+IL +Y   +G ++A+G  D T+R WDLR   C+ V+        S+ ASVA+      +A+GQED S +LYDI  GR + +   H +D RSVRFSP ++YL+T SYD  I +  ++ DL    P    V +H DKVIQCRWH  +   LSSSADRT  LW
Sbjct:  596 QFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDP---SAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTW-SGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMV-VGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 915

The following BLAST results are available for this feature:

BLAST of TCONS_00007275 vs. Swiss-Prot (Human)

BLAST of TCONS_00007275 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
WDR47	3.161e-76	44.31	WD repeat-containing protein 47 OS=Homo sapiens GN...	[more]

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TCONS_00007275 (transcript) - C. hemisphaerica