TCONS_00007615 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007615
Unique NameTCONS_00007615
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1768

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007615 ID=TCONS_00007615|Name=TCONS_00007615|organism=Clytia hemisphaerica|type=transcript|length=1768bp
aaaaaataaaattattaaaaaatattcaaaagataATAATCAGACATATA
ATGACGGAATGGGTGCGAACAGTTTGGTTTGAAGACGGGCAACAGTGTGA
GTGTTCCGTACCCAAAGATtggatacaaaatcaaattgTCAACCTGCCAG
GTGGTGTCAAGATATTAGACGAACGGAAAACGACCAACGACAACAACCTC
AATTTCCGGCCTCATTCAGTTTCGAACGACTCAGAGGAACAACAGGGTTA
CAATTCTCACACGTCAAACTCATATCCATCGGTACCGCCCTCTCTACAAA
GACACAGCGCCGCTCATTTGATGCACACCCCAACGCAAACAAATATGCAA
ATGCCTGACCCCCGTCTCCATCACAACATGCAAAATACAGACCCCCGTCA
AACTCATCCAATACAAAGTTTAGACCCACGGTCAACAAACAATATACAAA
ATAACCGGCCTGATAACACACTACAGAGCTTAGACCCTCGACTAACGGTG
TTAAATAACACACAGACGGGCGCTTCGAACGATCAAAGGGATCAACAAAT
CGGACAAAAACGGGACCGCTCGTCTGATATGGTTTCCATGGTACCGCCAA
ATAAACTTACCATTTCTGAAAAGATGATTTCGAACCAGCAAGAAGTCAAG
ATTGCACATTGTACAACTTGCAATTGTCATGTTAATAATGACTCTTTCCC
TATGCGCGAACAAGATTTCCAACGGACGGTGGTGAACGTCCTCTTAGACA
TGAAGCAAGAAATCCGGAAGTTAGCCAGAGGTCCGGTCGATTTACCGGAC
ATGCGTATCGAACCGGCTGACGATTTTGTGGACTTCATACGACTGGAAGA
ATCGTTGAAAGATCCAGACACATACAATACCTTTAAATTCCAACTGGCGA
AGATTGGTGGGATCGATACAATGGACTGTACCAAGAGAATCATGATTGTC
CTGATGACCAATAAGCTGATGTCCGAATTCAATATGGAAGGAAAAGGGAA
CAAAAAGAAACGGcccttcaaaaacaccaaagcATTGGAGCTAATAACCG
GTGCAATCCATTTACAAATCAAGACAACCGACAAACTAGTATACGACGCC
GTTAAAGATTTACTACGTCGTGCTCCTGACCGTAAAGGAGGTGCAGGTCG
GACGGAGCACCTTTCGGAAAGCCCCAGTTTCATCGTTGCGACCTCGACGA
CACCCACTCAACCCACACAACAAGTTGCTAGCATCTCGCAACATCCGCAA
CAGAGCTCGCAACCACCTCAACCACACCAACAAACTCATCCAAACCCTAA
CACCAATAATGTACAGCCACCTTCTTGAAAGACATACAAGACATTTGTTT
TGACCTCTGGCATTGTTGAGTTTCATTTGGTTTTTTCTCTCTATATTAAA
GTCGAAAATGTAGACTTTTTTTGCCGTTCTGTAAGAGATAGTCCAGATCA
AGAAAGAGTTCTTTCACACTCTTGAATTGAACATTGGACTTTCAATCAAT
TCAAGTCAGAAGTAATCAGCAGGAATATTCTTtcctttttgaagattttc
aatGTGCAGTAGGCAACATTTACTCAAATTGCGTCTCACTGTTAGAACTA
CTTTATAATTTCTTTATATGATTCAATCGGTGATGATTTTAAactaaata
tattcaaattataatttattattttcttaatattctgttgttattttagt
ttaaattatttttaactttttttttaaattttattctgTAGGAAACTACT
TTTTCTGCTCCAAACTCT
Run BLAST on NCBI

protein sequence of TCONS_00007615-protein

>TCONS_00007615-protein ID=TCONS_00007615-protein|Name=TCONS_00007615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
KIKLLKNIQKIIIRHIMTEWVRTVWFEDGQQCECSVPKDWIQNQIVNLPG
GVKILDERKTTNDNNLNFRPHSVSNDSEEQQGYNSHTSNSYPSVPPSLQR
HSAAHLMHTPTQTNMQMPDPRLHHNMQNTDPRQTHPIQSLDPRSTNNIQN
NRPDNTLQSLDPRLTVLNNTQTGASNDQRDQQIGQKRDRSSDMVSMVPPN
KLTISEKMISNQQEVKIAHCTTCNCHVNNDSFPMREQDFQRTVVNVLLDM
KQEIRKLARGPVDLPDMRIEPADDFVDFIRLEESLKDPDTYNTFKFQLAK
IGGIDTMDCTKRIMIVLMTNKLMSEFNMEGKGNKKKRPFKNTKALELITG
AIHLQIKTTDKLVYDAVKDLLRRAPDRKGGAGRTEHLSESPSFIVATSTT
PTQPTQQVASISQHPQQSSQPPQPHQQTHPNPNTNNVQPPS
Run BLAST on NCBI

transcript from alignment at sc0000078:437220..446339-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007615 ID=TCONS_00007615|Name=TCONS_00007615|organism=Clytia hemisphaerica|type=transcript|length=9120bp|location=Sequence derived from alignment at sc0000078:437220..446339- (Clytia hemisphaerica)
AAAAAATAAAATTATTAAAAAATATTCAAAAGATAATAATCAGACATATA
ATGACGGAATGGGTGCGAACAGTTTGGTTTGAAGACGGGCAACAGTGTGA
GTGTTCCGTACCCAAAGATTGGATACAAAATCAAATTGTCAACCTGCCAG
GTGGTGTCAAGATATTAGGTATGTTTTCCCATGATATCCACTGCAATATC
TACAGTTCTCTATCATGGGAGGAACAGTTCTTCGATTATGATATATCAAA
GACTCGATTTTTTGTGGCTTCTTGCCCTAGCTCATCCTTTAAATGGTTTC
TTTGTTTGTTCAGCTGAGTTTCCCCGGGGCTTTAGATAGGTCTAAGTCTG
GATCTTTTAACATTTCATCACGATTTGCTATAGTAATTGTGTCCCATCTG
TCCCTCTTAACATTAGCTCTCTGAACCTTTCATCACGAATTTTATAAGGA
CTCTAGTAACTTACTAAGTAAGGGTATCCTTCCATTCTCCAAATTCACAA
GCATGTACTCCTATACTCTTATGAATCCTTCCCTGGAAACTGTTCAATAC
ATGAATCATTTATTGAATGATTTATGGAGAGCTCGGCAATCTAATCAACC
ACTTTTCCGAGTGTGAAAGTCACCAAGGTTAACATAAATCAAGATAAAAC
TGCAAATAGTCCTTCTTGGGTGTTTCTTTCCGTTCATATTCAAATTTATA
TCAAAATAGCTCGAAAAATACTCGGTAGAAAGTCAAAAATGAACACGATT
CCGCAAATAATTGACCAGAAAAATCTTGAAAATCTTGAAACCTTGAAACT
GGCTAAACCAACAGTGTGCTCTTGTATCAATTAGCTCCTAATTAAAACCA
CTTTCAACATATTTCAGACGAACGGAAAACGACCAACGACAACAACCTCA
ATTTCCGGCCTCATTCAGGTACCCTTTTATAATGAATTTTGAAGCATGTT
CCTTATATAAGATTTGCCTTAAATTTCACTTTGATTTCATTAAACCTATA
TCAGAAAGGTAAAAATAAACCTGAAATCGAGCAAAAAATGTAAACATTTC
ACACAAAGTCGAGCGACAAGATTGACAACTTTTCGGAGGACAAAATTGGA
GTGTGCATATAGAGCCCTTTCCAACATTAACAAATCGTTTTTCTACCATT
TTCAGTTTCGAACGACTCAGAGGAACAACAGGGTTACAATTCTCACACGT
CAAACTCATGTAAGTGAAATCAGGAGAGAGTTCTTAACTCTTATTAAATA
GTTGAGTTTCTTTAATCAGATATCAGCGAGGTTAAGCAAGAAGCTATCTA
TTACGTACGGAATCCATTACGTGAGTTTTTAGACTGGATCCGAGGCGTTT
TAGCCTGATTCCTAAAGCTTCACGGCATAGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTATAATTTCATAATTTCATTCCTAGTTTACATAGGTACCAATCAA
AAATTACTGCTTTATTTATAAACAAAAAAATAATCTGTAAGAGCATAGTG
TATACAGTCAACAGTCTGTCATTCTTATTTAGCTGCATTTCTATATGAAT
GCTTCACCATTAGCATTACCAATAAAAAAGTGTACAAACCAGGTCTCGAG
GTTCATATCTGGCAGGTGTTCCTTCTTCTGCTTCTTTACATTCCAAGGTA
TCAATATCACCTTTTTAGGAAGGGAGATGTCTCCTTTAGAATCAACCAAA
CTTTCTGGAACGTATAACATTATAATGTCGAAGAAGTTGAAGGATGACCA
GTCAATAAACATTTTTCAGTAAAGGATTGAGAACTTAAAGCAGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTTCACGGGACAGAGTTAGCCTTGAGATTCGGGCTC
TAGCCCGCGAAAAACTCACGTAATAGATTCCGTACGTAATAGATAGCTTC
TTGCTTAACCTCGCTATCGTGTTGAAAACCTTTACAGTAATCACTGTTCT
TGATTCAGAAAGGTTTATAAAAATAACTATCAAAAGTTGTTTTTGGAATG
TTTTTTTTCGTTTCCACAGATCCATCGGTACCGCCCTCTCTACAAAGACA
CAGCGCCGCTCATTTGATGCACACCCCAACGCAAACAAATATGCAAATGC
CTGACCCCNAATAAACCTGAAATCGAGCAAAAAATGTAAACATTTCACAC
AAAGTCGAGCGACAAGATTGACAACTTTTCGGAGGACAAAATTGGAGTGT
GCATATAGAGCCCTTTCCAACATTAACAAATCGTTTTTCTACCATTTTCA
GTTTCGAACGACTCAGAGGAACAACAGGGTTACAATTCTCACACGTCAAA
CTCATGTAAGTGAAATCAGGAGAGAGTTCTTAGCTCTTATTAAATAGTTG
AGTTTCTTTAATCAGATATCGTGTTGAAAACCTTTACAGTAATCACTGGA
TTCAAGGGTTCTTGATTCAGAAAGGTTTATAAAAGTAACTATTAAAAGTT
GTTTTTGGAATGTTTTTTTTTCGTTTCCACAGATCCATCGGTACCGCCCT
CTCTACAAAGACACAGCGCCGCTCATTTGATGCACACCCCAACGCAAACA
AATATGCAAATGCCTGACCCCCGTCTCCATCACAACATGCAAAATACAGA
CCCCCGTCAAACTCATCCAATACAAAGTTTAGACCCACGGTCAACAAACA
ATATACAAAATAACCGGCCTGATAACACACTACAGAGCTTAGACCCTCGA
CTAACGGTGTTAAATAACACACAGACGGGCGCTTCGAACGATCAAAGGGA
TCAACAAATCGGACAAAAACGGGACCGCTCGTCTGATATGGTTTCCATGG
TACCGCCAAATAAACTTACCATTTCTGAAAAGATGATTTCGAACCAGCAA
GAAGTCAAGATTGCACATTGTACAACTTGCAATTGTCATGTTAATAATGA
CTCTTTCCCTATGCGCGAACAAGGTCAGTGTGTTTTGAGAATATGTTTTA
ATCTTTGAGAAACAAAAGTTAGAAAGGGGCCAGTGAAAAAATATACCGGG
TGCGCCACAAAAAAGTTTCTCTCTTTAAAGTTAATTTTCTCGAAGTCTGA
AAATTTTAAAAGACCCATTCCTTTTTCATTGGAAAGAAGAATGATAAACT
TAAATTTTGATAGGTCATATATTGAATTTGGTTTATGAGACCAAAAGTTA
TGCTCGATTGAATAAAAAAGTTACTTTCAGAAAGTGCTCAAAAACGTTGA
AAATCGACCTATCAAATNACTTAAATTTTGATAGGTCATATATTGAATTT
GGTTTATGAGACCAAAAGTTATGCTCGATTGAATAAAAAAGTTACTTTCA
GAAAGTGCTCAAAAACGTTGAAAATCAACCTATCAAATTTTATTTTAAAA
TATGGCAGTCGTGATAACCTTTGTACGAATAAGAGCATTTCTTAGCAATT
ATACGCATAGATTTTGAAACTTAAGCCTAAAAAGGGTTTATAACCTTTAT
GAAAATCATTTTATTTGTTTTCACCGAGTTTAGCATTAGATTTTTGGTTC
TAGACTGGATAATGTCAATGTAAGGCTGGATTTATCTCGAAACCTATATT
TCATGCATTTTGATTAATTTTGCCAGAATTTTTGGCATTTTCTGAAGAAT
TTTCTTCCTTTAGTTGAAATTCTACTTTCCTTTGTAAAACAAAAGGTCAC
TTTGACAGCTAATTATATTTTTTAATGACTAGAACAACAATACTGATGTA
TCATGTGATCGAGCTTCCGTTTAATTTGATAGGCTGATTTTCAACGTTTT
CGAGCACTTTTTGAAAGTAATTTTTTTATTCAATCGAGCATAACTTTTGA
TCTAATAAACCAAATTTAATAAATGACCCATCAAAATCTAAGTTAATCTT
TCTTCTTTACGATAAGAAAGGATTCGTTCTTTAAAAAATTTTAGATCTCG
GAAAAGTTCACTTTAAAAAGAGAAACTTTTTTGCGGCGCACCCGGTATTA
GTTTTGGTTTTTGAAAATTTAGAATTTAAATTTGTTACGCCAAAAATTAT
TGTTTTGAGATCAGAGGAATGTAAAGAGATGGAAAAACAGCTTCTTGAAA
ACATTGGAAAAACGGCTCGTCATATACCAGGTCTCTTGCCCTTAAGGGAG
TTTATGTCGAGTAAATAGGTTGCTTTTGTTGTCGCTATAAAAAATCTGCA
TAATTAGCGTGTTGTGACAAAATTCTTTTGTTTCAAGCTTGATTATGCGC
AAACTTTTAGGGCTTATATTTTGGGTACACCTCTCCTATACGAAAAGGTA
CCTATATCTTCTTGCTCAGAATTTCCTAGCGATTCTACTGATATAACCGC
ATCATGACCGCACTATAATATGGAAAGCTAGAGATCGAGAAAATTATAAC
TTCATCTTGATTTTACTCGACTTCTGACAGCTTTACAAGAACCAATTTAA
TATCATTGCGTTAAGAATTTCTTTTGCTATACATTGGTAAAAATATTGCT
ACTTATTCTTAAAAATTGAACTAGTAATCGGCAAAAAAGGAAAAACAAAT
TTTCATTTTTATCGTTTAATCATGTAGAAACCGTCCGATTTGTATGGCGA
GCCGTCTTTGCTTCCAGCTTTTAGCTCATTTTTGCTATTTTAGTATTCGC
AAATTCTTCCTTTATTTTCCTTTATTTTGTTTTTCATGTAGATTTCCAAC
GGACGGTGGTGAACGTCCTCTTAGACATGAAGCAAGAAATCCGGAAGTTA
GCCAGAGGTCCGGTCGATTTACCGGACATGCGTATCGAACCGGCTGACGA
TTTTGTGGACTTCATACGACTGGAAGAATCGTTGAAAGATCCAGACACAT
ACAATACCTTTGTAAGTTTCTTTCGACTGAGGATTGTTTGAATAAGACAT
GAAACTGTCAGTATTGAGATACAATTATTTTCACTGTTTCAACAATTTCA
ATTTAATCTGATTTTGGTTGGTTAAGCACTCTTATTGATGAATAAAAGCA
TCACATCAACAAAATAAGTTTCTTTATATATGATACCAGTTGTGACCATT
TTGAAAATGTCACCAAGGGGACATTCTAAAAGTTTTATCATCAGTTTTCA
ATATGAAACCTAACCTCATTCCCTGCGTATTATCGGTTTTTTGATGCTCA
CTGATAACGCAAAATAATTCTCCAACCATCAGTTGCAAAATAAAGCGTGG
GATACACGGAGTTGATTTTACTGATTATAAACTTGATACAATCGTGAGCG
TGTCCTTTCGTGAGCGATACCAGGTTCATAAAAAAATCAAACTAAATGTT
TGGATTAGAGTTTGATCAATTTGATGTTTGAACCAGCGAAGTAAATTTTT
TTGAGCTAAACCCCCAAATCGTAGAAGTTGTGGCTTCCTAGGAGAATATT
TGGAGGGACGTGTATGGATCTGAACCAGTCCCCCTGTGACTTTAGCAGGC
ATTCTTTAATTCTTCCCATAGAAATTCCAACTGGCGAAGATTGGTGGGAT
CGATACAATGGACTGTACCAAGAGAATCATGATTGTGTAAGACATGTACC
GAATTTCTGTTTTACACTTTTGAATGTCTGATGATGGGGAATTTCTATTT
CTTTTGAAAAAAATAAAACTTTTACCCTGGTACTAATATTTATCGGCGAT
CCAAAAAATATCTGCAATCTGATTGGTTAAAAAGAGTACAATATATCTTG
TATTTTACATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAAATATTTCA
CTCGTTCCGGATTTTCCGTATATTTTCCTCGCCTAAAGGCTCGGAAAATA
TTGTACGGAAAAATCTCGGAACTCGTAAAATATTTCTCATTTTGTACTCG
CAACTGTCCGATAACTATTACGTATATAACAGTTTATTTGATATTGATGA
AAAGGTAACAACAAATTCCAATAAAAGTCAACGCTACTTCACAATTGAGA
AATAGATTCGTTTTTGTGGCATCTCATCGTCACTGCTAGACACTCTGGTC
GGGATCTGCCTATATTGGTAGACGGAATTTTTCGGTGCCTTTATTAGGCG
AAAGTTTCAGGTTCTAACTGCATCTCTTGCAAAATCAATCAAATAGCAGT
AACGATAAACTATTTGTTTTCGTTCACTATTTGTTTAGCCTGATGACCAA
TAAGCTGATGTCCGAATTCAATATGGAAGGAAAAGGGAACAAAAAGAAAC
GGCCCTTCAAAAACACCAAAGCATTGGAGCTAATAACCGGTTGGTGAAGC
TGTTGCTCGTTCAGTTTTTTGAATTGTGTTTTTATTTTCATTCTTTGGTC
TTTTCCTGGCTGGCTGCTTTTGTTTTGCAATTGTTTGTTAAACTCGAGAT
TAATTGAGTTAAATCATGTGATCTGAGCATTTCTGAATATTTCTAACAAA
TTTTGTAAATTAACTAATTACGTATAAGTTTGAATAATTTTCTCAATGGA
CTTTGCCCTGTTTGAAGGGTGTCTATTTATGAAACCTGAGGGGTAACTTT
GCAGCCTTCAGTTAACAGCATTTTCTAGTCTTTGATCTGTTAANGGCTGG
CTGCTTTTGTTTTGCAATTGTTTGTTAAACTCGAGATTAATTGAGTTAAA
TCATGTGATCTGAGCATTTCTGAATATTTCTAACAAATTTTGTAAATTAA
CTAATTACGTATAAGTTTGAATAATTTTCTCAATGGACTTTGCCCTGTTT
GAAGGGTGTCTATTTATGAAACCTGAGGGGTAACTTTGCAGCCTTCAGTT
AACAGTATTTTCTAGTCTTTGATCTGTTAAAGACAGAATTCACAACGTGA
CTTGTTTACATTCCAGTATAATCCCCAATTTACTTACCAGAGAAGTCCAT
TGCTTAGAGGTTATGGGACTTAACCCCTTACTATGAAAATAACCCGAATC
GATGGTAATACGCGAAGAATCCAGTCTTAATGTTCTATAACTTAATCTCT
AGGTGCAATCCATTTACAAATCAAGACAACCGACAAACTAGTATACGACG
CCGTTAAAGATTTACTACGTCGTGCTCCTGACCGTAAAGGAGGTGCAGGT
CGGACGGAGCACCTTTCGGAAAGCCCCAGTTTCATCGTTGCGACCTCGAC
GACACCCACTCAACCCACACAACAAGTTGCTAGCATCTCGCAACATCCGC
AACAGAGCTCGCAACCACCTCAACCACACCAACAAACTCATCCAAACCCT
AACACCAATAATGTACAGCCACCTTCTTGAAAGACATACAAGACATTTGT
TTTGACCTCTGGCATTGTTGAGTTTCATTTGGTTTTTTCTCTCTATATTA
AAGTCGAAAATGTAGACTTTTTTTGCCGTTCTGTAAGAGATAGTCCAGAT
CAAGAAAGAGTTCTTTCACACTCTTGAATTGAACATTGGACTTTCAATCA
ATTCAAGTCAGAAGTAATCAGCAGGAATATTCTTTCCTTTTTGAAGATTT
TCAATGTGCAGTAGGCAACATTTACTCAAATTGCGTCTCACTGTTAGAAC
TACTTTATAATTTCTTTATATGATTCAATCGGTGATGATTTTAAACTAAA
TATATTCAAATTATAATTTATTATTTTCTTAATATTCTGTTGTTATTTTA
GTTTAAATTATTTTTAACTTTTTTTTTAAATTTTATTCTGTAGGAAACTA
CTTTTTCTGCTCCAAACTCT

Coding sequence (CDS) from alignment at sc0000078:437220..446339-

>TCONS_00007615 ID=TCONS_00007615|Name=TCONS_00007615|organism=Clytia hemisphaerica|type=CDS|length=1326bp|location=Sequence derived from alignment at sc0000078:437220..446339- (Clytia hemisphaerica)
AAAATAAAATTATTAAAAAATATTCAAAAGATAATAATCAGACATATAAT
GACGGAATGGGTGCGAACAGTTTGGTTTGAAGACGGGCAACAGTGTGAGT
GTTCCGTACCCAAAGATTGGATACAAAATCAAATTGTCAACCTGCCAGGT
GGTGTCAAGATATTAGACGAACGGAAAACGACCAACGACAACAACCTCAA
TTTCCGGCCTCATTCAGTTTCGAACGACTCAGAGGAACAACAGGGTTACA
ATTCTCACACGTCAAACTCATATCCATCGGTACCGCCCTCTCTACAAAGA
CACAGCGCCGCTCATTTGATGCACACCCCAACGCAAACAAATATGCAAAT
GCCTGACCCCCGTCTCCATCACAACATGCAAAATACAGACCCCCGTCAAA
CTCATCCAATACAAAGTTTAGACCCACGGTCAACAAACAATATACAAAAT
AACCGGCCTGATAACACACTACAGAGCTTAGACCCTCGACTAACGGTGTT
AAATAACACACAGACGGGCGCTTCGAACGATCAAAGGGATCAACAAATCG
GACAAAAACGGGACCGCTCGTCTGATATGGTTTCCATGGTACCGCCAAAT
AAACTTACCATTTCTGAAAAGATGATTTCGAACCAGCAAGAAGTCAAGAT
TGCACATTGTACAACTTGCAATTGTCATGTTAATAATGACTCTTTCCCTA
TGCGCGAACAAGATTTCCAACGGACGGTGGTGAACGTCCTCTTAGACATG
AAGCAAGAAATCCGGAAGTTAGCCAGAGGTCCGGTCGATTTACCGGACAT
GCGTATCGAACCGGCTGACGATTTTGTGGACTTCATACGACTGGAAGAAT
CGTTGAAAGATCCAGACACATACAATACCTTTAAATTCCAACTGGCGAAG
ATTGGTGGGATCGATACAATGGACTGTACCAAGAGAATCATGATTGTCCT
GATGACCAATAAGCTGATGTCCGAATTCAATATGGAAGGAAAAGGGAACA
AAAAGAAACGGCCCTTCAAAAACACCAAAGCATTGGAGCTAATAACCGGT
GCAATCCATTTACAAATCAAGACAACCGACAAACTAGTATACGACGCCGT
TAAAGATTTACTACGTCGTGCTCCTGACCGTAAAGGAGGTGCAGGTCGGA
CGGAGCACCTTTCGGAAAGCCCCAGTTTCATCGTTGCGACCTCGACGACA
CCCACTCAACCCACACAACAAGTTGCTAGCATCTCGCAACATCCGCAACA
GAGCTCGCAACCACCTCAACCACACCAACAAACTCATCCAAACCCTAACA
CCAATAATGTACAGCCACCTTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004300XLOC_004300Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007615-exon-sc0000078-1575043694:446172..446339TCONS_00007615-exon-sc0000078-1575043694:446172..446339Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:445422..445472TCONS_00007615-exon-sc0000078-1575043694:445422..445472Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:443135..443188TCONS_00007615-exon-sc0000078-1575043694:443135..443188Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:442517..442957TCONS_00007615-exon-sc0000078-1575043694:442517..442957Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:440629..440798TCONS_00007615-exon-sc0000078-1575043694:440629..440798Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:439954..440018TCONS_00007615-exon-sc0000078-1575043694:439954..440018Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:438651..438751TCONS_00007615-exon-sc0000078-1575043694:438651..438751Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1575043694:437220..437937TCONS_00007615-exon-sc0000078-1575043694:437220..437937Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:446172..446339TCONS_00007615-exon-sc0000078-1510915933:446172..446339Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:445422..445472TCONS_00007615-exon-sc0000078-1510915933:445422..445472Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:443135..443188TCONS_00007615-exon-sc0000078-1510915933:443135..443188Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:442517..442957TCONS_00007615-exon-sc0000078-1510915933:442517..442957Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:440629..440798TCONS_00007615-exon-sc0000078-1510915933:440629..440798Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:439954..440018TCONS_00007615-exon-sc0000078-1510915933:439954..440018Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:438651..438751TCONS_00007615-exon-sc0000078-1510915933:438651..438751Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1510915933:437220..437937TCONS_00007615-exon-sc0000078-1510915933:437220..437937Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:446172..446339TCONS_00007615-exon-sc0000078-1491911889:446172..446339Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:445422..445472TCONS_00007615-exon-sc0000078-1491911889:445422..445472Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:443135..443188TCONS_00007615-exon-sc0000078-1491911889:443135..443188Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:442517..442957TCONS_00007615-exon-sc0000078-1491911889:442517..442957Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:440629..440798TCONS_00007615-exon-sc0000078-1491911889:440629..440798Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:439954..440018TCONS_00007615-exon-sc0000078-1491911889:439954..440018Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:438651..438751TCONS_00007615-exon-sc0000078-1491911889:438651..438751Clytia hemisphaericaexon
TCONS_00007615-exon-sc0000078-1491911889:437220..437937TCONS_00007615-exon-sc0000078-1491911889:437220..437937Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007615-proteinTCONS_00007615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:437220..446339 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15876	1.24272	1.00494	0.805662	16.1918	12.4009	11.8389	12.9975	5.04854	6.84532	5.37034	3.64519	4.90269	4.11236	4.75988	4.78507	7.16262	7.42682	3.24158	3.33215	3.51601	4.36258	7.18846	7.51981	5.73085	5.6462	3.7863	4.56234	6.01145	6.1894
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032071DUF4806
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007615 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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