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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007675 ID=TCONS_00007675|Name=TCONS_00007675|organism=Clytia hemisphaerica|type=transcript|length=3123bp
AAGTTGAGTCTCGTGATTTGAATCTCGTGATTTTTGTAATCTATTAAAAA
CAGAGTCTGAGGGTGTTGTATGTTTGATAGAGAGAGTACATACGTGGCAG
CAGCAACAATGAATATTTTTCATCAGCAGAAAAACTACCCTACGCAACAA
CAGAAAAATGGATTCAAACAACAACTCTTACGCGAGAAATCTACCAAATG
CTTACTTGATTtatttcacaaaaagttttcaagaaatcCTGTGACATTGT
ATCAAGAATTGTCACAGACAAAACACAAGAGAAAGTTGGATAAATTAAAA
GGGAAAATGGTTCTGAATGACGATCAATATGATCTTGTTTATCCAGCATC
ACAACAAACAGATTCAACACAATTTGACATcactttgctttttcttttga
tacGAACATTATGTGGTCACAGGACACCTTCCAATGGTTGGGATAAAGAA
CCAGATGTCAACGATGTTGATGACATTGCAAATGCTCTTCGTTTGAAACT
CGAAAGAAATCGAATGCAGCATGGCCAGCTATCAATCTCCACAGTAGAGT
ATCGAAGATCGTTTCAGTatataaaaaaacctttattaGCTCTTGGATGC
TCGCAGAACGACCTGAACGACTTGCTACCCTCTTTTGAATATAATCCACC
TCAACCGAACGTGAATTTCACCGGACGAGACGACGAATTAAAGGAGATCA
ATGATAGTTTTAACCTCAAGAAAGCCTGTAATGTCGTTATCACAGGGATT
CCAGGTGTTGGGAAAAGCGAAACTGCAAACCATTATTACGTCACCCATCA
AACTGATTACGACCACGTGATCAAAATCAATGTAGATAACATCGAAAACG
ATTTTAAAAATGTTGCCACTATTTTAAAACTGGACGAGAAGACGAATATC
CAAGTCATTATAGCTTTACTGAAAACATACTTCCAAAACGAAATGGTCCT
TTATATCTACGATAATTGTACCGCGGTTGAGCAGTTGACCAAATATCTCG
ATCCAGGTCACCATAACTTGATCACCACTCAATGGAAACATTGGGGAGCT
GGGTACAAAATAGTGACTATTGATAAATGGTCAGAACAAAGCGCTATCAA
GTTCCTTAAGAGCCAATTGAAAACAGCTGATCCAAAAGAATTGTCTGAAT
TATCGAAAGAGTTGGAGTTCCATCCATTAGGACTTCAGCATGCAGTAGCC
TCGATAACCCAAACTCAATTACCGATTAATGAATACCTCGATGAGCTAAG
AAAACATAAAGTTGATATGTTGTCTGAACAAGTAGCACTTGGTTATGGAA
TAACAACGTCAGTCTTTGCCTCGTTCTTCATAACAATTGAAAAGATTGAA
CGAGAGAGTCCGGAGGTGATGAAACTTTTGTCTTTGTTTGGGATTCTCGA
TGGAACTTTTATGTTGGAGGAGTTTCTTAAAAGGTGTTATGAGACAAAGA
CAGAATACAATACATCCAAACGCATCTTGTTTAATTATTCAATCATCCAA
GCTAAGCAACAAATGACTGAATTCACCAACAAAAAAGTCAACTATCTAAC
CGTCCATTCTCTCTATCAGGAGGCAGTTAAGATCTACATCACTAAAAATA
GAGCCTTACAAAAATCACTAGAGCAGTTTATTGAGATGTTTTCATCCGAG
AAGTGGCTGTCTTTTGATACAACCTCAGAATACAAATTATGGCTAAACCA
CCTCCAGCACCTTTGGGAGCAAGATTGTTACAAAGATATCATTGTCAGTC
AATTATCAAACTATCCAGCGGTAGAAATATTTTCGCCTTCGGAATGTATT
CTCAAAGACATCGCAAGGCGAATTTATGACTCGACAAAAAACGACTTGAA
AAATCCAGTATCTTACTACCTGGATTGTTGTTATGCTGATCAAGAACTGG
CATATTGGGAAAACTTCGAGCAACGAGTGAATGAAAATCTTGAAGAAAGC
CCAGTGAAAAGGAATTTGTTAGAACGTATAACAAATACGAAAGCAGTGCT
AAACACTGACAACAGTGAAAACGTAATgagaaaatttattgttttttatc
tGAATGGCCATTTTGAACAGATGCCCAGCTTCTTACAAATACTACCTGCT
CAAACTATCGAGATGAACTTTTTTCGAAGCATCTGTTATAAAGAAACACA
AGAGTTTGATAAAGCTTTGGATTTACTTTACACGATATCAGATTATAAAC
ATGAAGAATCGAGTGCTAAAGTCCAAATCGGCTGTTGTATGATCTTAAAT
GGAGAAATTCAAAAAGGGATGAAAGTGATAGAAGAATCAGAGCCTTTGAG
TAATGACTCAATATGCGATGCTGGGCGAGCATGTTTCGATGTTGGTTTGT
TTGATGAAAGTAACAAATACTTTAAAAGGTGGCTCGCAAGCTCACCAATT
CCTTGTACTGCGATTGCTGTTGACGCCTTCTGCAAAATACTGATGTTACC
CGATAATCTACCGGTGGATTCTCTTTATTCTGTGATAATAAGGATGCGGC
CACGTGACCCGactatttgcttcaaaatccgCGGTCTGATACTCCTTTAC
TGTCTGTATGTGAAAAATGATGAAGCTTCAATGGCTGAACAAGTTTCAAT
GAGTTTTTCGTACGCAGAGATTGAAGAAAAGAGATACACGAGTAATATTT
TTCGGGAAGCATTTATCCTGGCTGACCATTGGCTAAAAACTTGTCGGTTT
TATAAAGCGCTGGTTGTTTATCGCATGATCGATGAGTTAGGTGATAAAAT
TGACGATCATGAACAAATATGTGTTGAGCTTGATTGGGATTTGCTTGACG
TGGATGAACAGATCGATTTTTGTATTGCAAtgttgagaaaaatatttcat
ttttaaagctCATGTATTTTCTAATTATTTTATTACTAAAAGATTTTACT
acgatttaaaataaaatattatactTAAAGCTTAATTTAACAAAATGAAC
ATTAGTATATGTAATtgcatgataacgagtgcattTCGGAAATAATTTCA
AGagtgaattttttgtttttaattttccgagtccgaaaggacaattcgtt
cgttcgttcgtcagAATTAGAATTAGctgataagattttttaaatttttg
gcataataaagatgcaaaatggt Run BLAST on NCBI protein sequence of TCONS_00007675-protein >TCONS_00007675-protein ID=TCONS_00007675-protein|Name=TCONS_00007675-protein|organism=Clytia hemisphaerica|type=polypeptide|length=928bp
MFDRESTYVAAATMNIFHQQKNYPTQQQKNGFKQQLLREKSTKCLLDLFH
KKFSRNPVTLYQELSQTKHKRKLDKLKGKMVLNDDQYDLVYPASQQTDST
QFDITLLFLLIRTLCGHRTPSNGWDKEPDVNDVDDIANALRLKLERNRMQ
HGQLSISTVEYRRSFQYIKKPLLALGCSQNDLNDLLPSFEYNPPQPNVNF
TGRDDELKEINDSFNLKKACNVVITGIPGVGKSETANHYYVTHQTDYDHV
IKINVDNIENDFKNVATILKLDEKTNIQVIIALLKTYFQNEMVLYIYDNC
TAVEQLTKYLDPGHHNLITTQWKHWGAGYKIVTIDKWSEQSAIKFLKSQL
KTADPKELSELSKELEFHPLGLQHAVASITQTQLPINEYLDELRKHKVDM
LSEQVALGYGITTSVFASFFITIEKIERESPEVMKLLSLFGILDGTFMLE
EFLKRCYETKTEYNTSKRILFNYSIIQAKQQMTEFTNKKVNYLTVHSLYQ
EAVKIYITKNRALQKSLEQFIEMFSSEKWLSFDTTSEYKLWLNHLQHLWE
QDCYKDIIVSQLSNYPAVEIFSPSECILKDIARRIYDSTKNDLKNPVSYY
LDCCYADQELAYWENFEQRVNENLEESPVKRNLLERITNTKAVLNTDNSE
NVMRKFIVFYLNGHFEQMPSFLQILPAQTIEMNFFRSICYKETQEFDKAL
DLLYTISDYKHEESSAKVQIGCCMILNGEIQKGMKVIEESEPLSNDSICD
AGRACFDVGLFDESNKYFKRWLASSPIPCTAIAVDAFCKILMLPDNLPVD
SLYSVIIRMRPRDPTICFKIRGLILLYCLYVKNDEASMAEQVSMSFSYAE
IEEKRYTSNIFREAFILADHWLKTCRFYKALVVYRMIDELGDKIDDHEQI
CVELDWDLLDVDEQIDFCIAMLRKIFHF Run BLAST on NCBI transcript from alignment at sc0000078:704934..708056 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007675 ID=TCONS_00007675|Name=TCONS_00007675|organism=Clytia hemisphaerica|type=transcript|length=3123bp|location=Sequence derived from alignment at sc0000078:704934..708056 (Clytia hemisphaerica)
accattttgcatctttattatgccaaaaatttaaaaaatcttatcagCTA
ATTCTAATTctgacgaacgaacgaacgaattgtcctttcggactcggaaa
attaaaaacaaaaaattcactCTTGAAATTATTTCCGAaatgcactcgtt
atcatgcaATTACATATACTAATGTTCATTTTGTTAAATTAAGCTTTAag
tataatattttattttaaatcgtAGTAAAATCTTTTAGTAATAAAATAAT
TAGAAAATACATGagctttaaaaatgaaatatttttctcaacaTTGCAAT
ACAAAAATCGATCTGTTCATCCACGTCAAGCAAATCCCAATCAAGCTCAA
CACATATTTGTTCATGATCGTCAATTTTATCACCTAACTCATCGATCATG
CGATAAACAACCAGCGCTTTATAAAACCGACAAGTTTTTAGCCAATGGTC
AGCCAGGATAAATGCTTCCCGAAAAATATTACTCGTGTATCTCTTTTCTT
CAATCTCTGCGTACGAAAAACTCATTGAAACTTGTTCAGCCATTGAAGCT
TCATCATTTTTCACATACAGACAGTAAAGGAGTATCAGACCGcggatttt
gaagcaaatagtCGGGTCACGTGGCCGCATCCTTATTATCACAGAATAAA
GAGAATCCACCGGTAGATTATCGGGTAACATCAGTATTTTGCAGAAGGCG
TCAACAGCAATCGCAGTACAAGGAATTGGTGAGCTTGCGAGCCACCTTTT
AAAGTATTTGTTACTTTCATCAAACAAACCAACATCGAAACATGCTCGCC
CAGCATCGCATATTGAGTCATTACTCAAAGGCTCTGATTCTTCTATCACT
TTCATCCCTTTTTGAATTTCTCCATTTAAGATCATACAACAGCCGATTTG
GACTTTAGCACTCGATTCTTCATGTTTATAATCTGATATCGTGTAAAGTA
AATCCAAAGCTTTATCAAACTCTTGTGTTTCTTTATAACAGATGCTTCGA
AAAAAGTTCATCTCGATAGTTTGAGCAGGTAGTATTTGTAAGAAGCTGGG
CATCTGTTCAAAATGGCCATTCagataaaaaacaataaattttctcATTA
CGTTTTCACTGTTGTCAGTGTTTAGCACTGCTTTCGTATTTGTTATACGT
TCTAACAAATTCCTTTTCACTGGGCTTTCTTCAAGATTTTCATTCACTCG
TTGCTCGAAGTTTTCCCAATATGCCAGTTCTTGATCAGCATAACAACAAT
CCAGGTAGTAAGATACTGGATTTTTCAAGTCGTTTTTTGTCGAGTCATAA
ATTCGCCTTGCGATGTCTTTGAGAATACATTCCGAAGGCGAAAATATTTC
TACCGCTGGATAGTTTGATAATTGACTGACAATGATATCTTTGTAACAAT
CTTGCTCCCAAAGGTGCTGGAGGTGGTTTAGCCATAATTTGTATTCTGAG
GTTGTATCAAAAGACAGCCACTTCTCGGATGAAAACATCTCAATAAACTG
CTCTAGTGATTTTTGTAAGGCTCTATTTTTAGTGATGTAGATCTTAACTG
CCTCCTGATAGAGAGAATGGACGGTTAGATAGTTGACTTTTTTGTTGGTG
AATTCAGTCATTTGTTGCTTAGCTTGGATGATTGAATAATTAAACAAGAT
GCGTTTGGATGTATTGTATTCTGTCTTTGTCTCATAACACCTTTTAAGAA
ACTCCTCCAACATAAAAGTTCCATCGAGAATCCCAAACAAAGACAAAAGT
TTCATCACCTCCGGACTCTCTCGTTCAATCTTTTCAATTGTTATGAAGAA
CGAGGCAAAGACTGACGTTGTTATTCCATAACCAAGTGCTACTTGTTCAG
ACAACATATCAACTTTATGTTTTCTTAGCTCATCGAGGTATTCATTAATC
GGTAATTGAGTTTGGGTTATCGAGGCTACTGCATGCTGAAGTCCTAATGG
ATGGAACTCCAACTCTTTCGATAATTCAGACAATTCTTTTGGATCAGCTG
TTTTCAATTGGCTCTTAAGGAACTTGATAGCGCTTTGTTCTGACCATTTA
TCAATAGTCACTATTTTGTACCCAGCTCCCCAATGTTTCCATTGAGTGGT
GATCAAGTTATGGTGACCTGGATCGAGATATTTGGTCAACTGCTCAACCG
CGGTACAATTATCGTAGATATAAAGGACCATTTCGTTTTGGAAGTATGTT
TTCAGTAAAGCTATAATGACTTGGATATTCGTCTTCTCGTCCAGTTTTAA
AATAGTGGCAACATTTTTAAAATCGTTTTCGATGTTATCTACATTGATTT
TGATCACGTGGTCGTAATCAGTTTGATGGGTGACGTAATAATGGTTTGCA
GTTTCGCTTTTCCCAACACCTGGAATCCCTGTGATAACGACATTACAGGC
TTTCTTGAGGTTAAAACTATCATTGATCTCCTTTAATTCGTCGTCTCGTC
CGGTGAAATTCACGTTCGGTTGAGGTGGATTATATTCAAAAGAGGGTAGC
AAGTCGTTCAGGTCGTTCTGCGAGCATCCAAGAGCtaataaaggtttttt
tatatACTGAAACGATCTTCGATACTCTACTGTGGAGATTGATAGCTGGC
CATGCTGCATTCGATTTCTTTCGAGTTTCAAACGAAGAGCATTTGCAATG
TCATCAACATCGTTGACATCTGGTTCTTTATCCCAACCATTGGAAGGTGT
CCTGTGACCACATAATGTTCgtatcaaaagaaaaagcaaagtgATGTCAA
ATTGTGTTGAATCTGTTTGTTGTGATGCTGGATAAACAAGATCATATTGA
TCGTCATTCAGAACCATTTTCCCTTTTAATTTATCCAACTTTCTCTTGTG
TTTTGTCTGTGACAATTCTTGATACAATGTCACAGgatttcttgaaaact
ttttgtgaaataAATCAAGTAAGCATTTGGTAGATTTCTCGCGTAAGAGT
TGTTGTTTGAATCCATTTTTCTGTTGTTGCGTAGGGTAGTTTTTCTGCTG
ATGAAAAATATTCATTGTTGCTGCTGCCACGTATGTACTCTCTCTATCAA
ACATACAACACCCTCAGACTCTGTTTTTAATAGATTACAAAAATCACGAG
ATTCAAATCACGAGACTCAACTT Coding sequence (CDS) from alignment at sc0000078:704934..708056 >TCONS_00007675 ID=TCONS_00007675|Name=TCONS_00007675|organism=Clytia hemisphaerica|type=CDS|length=2787bp|location=Sequence derived from alignment at sc0000078:704934..708056 (Clytia hemisphaerica)
ttaaaaatgaaatatttttctcaacaTTGCAATACAAAAATCGATCTGTT
CATCCACGTCAAGCAAATCCCAATCAAGCTCAACACATATTTGTTCATGA
TCGTCAATTTTATCACCTAACTCATCGATCATGCGATAAACAACCAGCGC
TTTATAAAACCGACAAGTTTTTAGCCAATGGTCAGCCAGGATAAATGCTT
CCCGAAAAATATTACTCGTGTATCTCTTTTCTTCAATCTCTGCGTACGAA
AAACTCATTGAAACTTGTTCAGCCATTGAAGCTTCATCATTTTTCACATA
CAGACAGTAAAGGAGTATCAGACCGcggattttgaagcaaatagtCGGGT
CACGTGGCCGCATCCTTATTATCACAGAATAAAGAGAATCCACCGGTAGA
TTATCGGGTAACATCAGTATTTTGCAGAAGGCGTCAACAGCAATCGCAGT
ACAAGGAATTGGTGAGCTTGCGAGCCACCTTTTAAAGTATTTGTTACTTT
CATCAAACAAACCAACATCGAAACATGCTCGCCCAGCATCGCATATTGAG
TCATTACTCAAAGGCTCTGATTCTTCTATCACTTTCATCCCTTTTTGAAT
TTCTCCATTTAAGATCATACAACAGCCGATTTGGACTTTAGCACTCGATT
CTTCATGTTTATAATCTGATATCGTGTAAAGTAAATCCAAAGCTTTATCA
AACTCTTGTGTTTCTTTATAACAGATGCTTCGAAAAAAGTTCATCTCGAT
AGTTTGAGCAGGTAGTATTTGTAAGAAGCTGGGCATCTGTTCAAAATGGC
CATTCagataaaaaacaataaattttctcATTACGTTTTCACTGTTGTCA
GTGTTTAGCACTGCTTTCGTATTTGTTATACGTTCTAACAAATTCCTTTT
CACTGGGCTTTCTTCAAGATTTTCATTCACTCGTTGCTCGAAGTTTTCCC
AATATGCCAGTTCTTGATCAGCATAACAACAATCCAGGTAGTAAGATACT
GGATTTTTCAAGTCGTTTTTTGTCGAGTCATAAATTCGCCTTGCGATGTC
TTTGAGAATACATTCCGAAGGCGAAAATATTTCTACCGCTGGATAGTTTG
ATAATTGACTGACAATGATATCTTTGTAACAATCTTGCTCCCAAAGGTGC
TGGAGGTGGTTTAGCCATAATTTGTATTCTGAGGTTGTATCAAAAGACAG
CCACTTCTCGGATGAAAACATCTCAATAAACTGCTCTAGTGATTTTTGTA
AGGCTCTATTTTTAGTGATGTAGATCTTAACTGCCTCCTGATAGAGAGAA
TGGACGGTTAGATAGTTGACTTTTTTGTTGGTGAATTCAGTCATTTGTTG
CTTAGCTTGGATGATTGAATAATTAAACAAGATGCGTTTGGATGTATTGT
ATTCTGTCTTTGTCTCATAACACCTTTTAAGAAACTCCTCCAACATAAAA
GTTCCATCGAGAATCCCAAACAAAGACAAAAGTTTCATCACCTCCGGACT
CTCTCGTTCAATCTTTTCAATTGTTATGAAGAACGAGGCAAAGACTGACG
TTGTTATTCCATAACCAAGTGCTACTTGTTCAGACAACATATCAACTTTA
TGTTTTCTTAGCTCATCGAGGTATTCATTAATCGGTAATTGAGTTTGGGT
TATCGAGGCTACTGCATGCTGAAGTCCTAATGGATGGAACTCCAACTCTT
TCGATAATTCAGACAATTCTTTTGGATCAGCTGTTTTCAATTGGCTCTTA
AGGAACTTGATAGCGCTTTGTTCTGACCATTTATCAATAGTCACTATTTT
GTACCCAGCTCCCCAATGTTTCCATTGAGTGGTGATCAAGTTATGGTGAC
CTGGATCGAGATATTTGGTCAACTGCTCAACCGCGGTACAATTATCGTAG
ATATAAAGGACCATTTCGTTTTGGAAGTATGTTTTCAGTAAAGCTATAAT
GACTTGGATATTCGTCTTCTCGTCCAGTTTTAAAATAGTGGCAACATTTT
TAAAATCGTTTTCGATGTTATCTACATTGATTTTGATCACGTGGTCGTAA
TCAGTTTGATGGGTGACGTAATAATGGTTTGCAGTTTCGCTTTTCCCAAC
ACCTGGAATCCCTGTGATAACGACATTACAGGCTTTCTTGAGGTTAAAAC
TATCATTGATCTCCTTTAATTCGTCGTCTCGTCCGGTGAAATTCACGTTC
GGTTGAGGTGGATTATATTCAAAAGAGGGTAGCAAGTCGTTCAGGTCGTT
CTGCGAGCATCCAAGAGCtaataaaggtttttttatatACTGAAACGATC
TTCGATACTCTACTGTGGAGATTGATAGCTGGCCATGCTGCATTCGATTT
CTTTCGAGTTTCAAACGAAGAGCATTTGCAATGTCATCAACATCGTTGAC
ATCTGGTTCTTTATCCCAACCATTGGAAGGTGTCCTGTGACCACATAATG
TTCgtatcaaaagaaaaagcaaagtgATGTCAAATTGTGTTGAATCTGTT
TGTTGTGATGCTGGATAAACAAGATCATATTGATCGTCATTCAGAACCAT
TTTCCCTTTTAATTTATCCAACTTTCTCTTGTGTTTTGTCTGTGACAATT
CTTGATACAATGTCACAGgatttcttgaaaactttttgtgaaataAATCA
AGTAAGCATTTGGTAGATTTCTCGCGTAAGAGTTGTTGTTTGAATCCATT
TTTCTGTTGTTGCGTAGGGTAGTTTTTCTGCTGATGAAAAATATTCATTG
TTGCTGCTGCCACGTATGTACTCTCTCTATCAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007675-exon-sc0000078-1491911889:704934..708056 | TCONS_00007675-exon-sc0000078-1491911889:704934..708056 | Clytia hemisphaerica | exon |
| TCONS_00007675-exon-sc0000078-1510915933:704934..708056 | TCONS_00007675-exon-sc0000078-1510915933:704934..708056 | Clytia hemisphaerica | exon |
| TCONS_00007675-exon-sc0000078-1575043694:704934..708056 | TCONS_00007675-exon-sc0000078-1575043694:704934..708056 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:704934..708056 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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