TCONS_00007834 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007834
Unique Name	TCONS_00007834
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3705

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000080:438521..456522+
coding sequence from alignment at sc0000080:438521..456522+

transcript sequence

>TCONS_00007834 ID=TCONS_00007834|Name=TCONS_00007834|organism=Clytia hemisphaerica|type=transcript|length=3705bp
GGACTGGGGAGAGTTCAAATTGAACTTTGAAGCTTGCGTAAAAACATTGG
TGACAAGAAATTTTATCGAAAACAAAGATGACGACTGAGTAATATAATCA
AGGCAGTGAATGTCAAATTATGTAGAATTATGTTCAGGAAAACCCGTAAT
ACGATAATTGTATCATTAGTTAGCTATTGTATGCTTAGTTTGTAAGATTT
TCAACAAGAAATGAGTGCTCCATATCCAGGAATGCCACCACCCAATTCTC
TTGGTCATCAGACTGTCAATCGACCTCAAGTACCCAATGGATTGCCAATG
AATAATCAGCAAAGATCAAATATGAATCAAGCAAGAATGCCAGCAATGTC
ACAACCACCTACCTATACTCCTCAACCTTTGACCAAACCAATTAATAACA
TTGCTAGTCAACCAAGGTTGAATGCACCACCAGCACTCAACCAAATTCCA
TTTGGAGCACCAACTAATTTACGCCAACCAACATCTATGCCAAACACTCA
AATGAATGGACATCAACCTACAAACTCACCTGTAAAACCAGGACAAGTGG
TTCCTCCTGCAAGTCTTCCAAATGGACAAATGACACAACAGCCAGgaTTA
CCCAGAGGAAGAAGACCCTACCCAACTATGTCTGCCCCTGCTACACTACC
TACCACAACACAACAGCCTTCTGGACAAAGGGCCTCAACGCAGCCACAAA
CACAAACTATGACCTCACAAATGGACAGAATGCAATTAAGTGGACAAACA
AGTCCTAGGCAACCACCTCAAACACAAACTCAGCCTTCCAGAACGAATCA
ATACCCTCAAATGCCTGCTAACTCTTATAATCAATCTAATACTAACGACC
AAAATCAGCTAAACAAACGTCTCACAGTTCAGCAATCTCAAACTTTTGGT
TTGAATTTAATTGAACAACGCAACATCATTCCTCCGCAACCGATTTCACC
ACCAACTCCCCCAATATCTGAGGAATTACAAAGGAAAAATGCAAAGACAA
AAACAATGAGATGTACGTTCAATGCTGTTCCTCAAACATCAAACTTACTA
AAACAATCGAAACTACCTTTCGGAGTATATATACAACCATTCAGGGATGA
CCCGAATATTCCAATCGTGAGCTCAGTGATCACAAGATGTAGATCATGCC
GCTCTTATCTTAATCCTTTCGTTTCACTCATCGATCATCGTCGTTGGCAA
TGTAATATGTGCTTCAGAATCAATGACAttcCAGAAGAACTAACATTTGA
TTATAATAATAGACAATACCAAGATGTGCGGAAAAGGCCTGAACTAAATC
ATGCATCAATAGAATTCATAGCACCTGCAGAATATATGCTTCGTCCACCA
CAACCATCTTGTTTTGTTATCGCTCTTGATGTTTCATACAATGCAATCGG
AACAGGATATCTACGGAACGTTTGTAAGATCATTGCAAATAACCTTGACA
ACTTACCTGGAGATTCAAGAACAATGATTGGATTTGTTACCTTTAATAGT
TCAGTACAATTTTATAGCCTAAAGGCAAACCAAAGTCAACCACAGATGCA
CGTAGTTTCAGATGTCGATGATATTTATCTACCTGTTCCCGATGGTCTGC
TGGTCAATATCAAGGAAAACAAAGAGATGATTTTACAATTATTGGAATCT
CTTCCGACATCATTTGACAAAGAAATCGATACCAAATGTGCAACTGGTGC
TGCTATGTTGGGGGCAAAGAAATTAGTCACATCGGTTGGCGGTAGAATAA
CAGTCTTCCAATCCTGTCTTCCAAACGTTGGTCCCGGTAAATTAACTTTA
CGAGAAAGCTCAAACATATCTACTAATGCAAAAGATATTGCTAACTTGAA
CCCGACGACAGACTTTTACAAGAAATTGGCATTAGAATGTGCTGGAGAAC
AAATAGCTATTGATCTTTTCATATTGGCTGGCCAGTATTGTGATCTAGCT
TCAATGTCGGGTGTGTCAAGATATTCTAGTGGTGCAATCCACTATTATCC
TGATTATCATCACACACAAAATCAACCGATGGTTGAAAAGTTCACTCACG
ATTTCGCGCGATATCTGACAAGAGCTATCGGTCTCGAAGCAGTCATGAGG
TTGCGATGCACCAAAGGCATGAGTATCAACACATTCCATGGAAACTTCTT
TGTGCGGTCAACAGACCTTCTATCTTTACCCAACGTTAATCCTGATCACA
GCTTTGGAATGCAAATTGATATTGAGGATAACTTGACGGAAACCTCAATG
GTGGCATTCCAAGCAGCCCTATTATATACTAATACTAAAGGTGAACGAAG
GATACGTGTGCACACCATTGCTTTACCTGTCACTTCAAAACTAAGTGACA
TTTATGCTTATGCGGATCAAGAAGCTATTGTCAACACACTCTCAAAACTC
GCGGCCGACCGAACGTTAATGTCTTCCCTTGGAGACGCACGGGAGGCTCT
AATGAACGCATGTATCGATTGTCTGAAGTCGTACAAACACGAAGTGGCAA
ACCAGAAACATAATTCTGCACTGATATCACCTTTCCAACTACGTCTATTG
CCTGTCAATATCTTAGCCATGATGAAAAATGAAGCATTCAAGCTTGGCAG
TTCAGTATCTCTGGATCAACGAGTTTATTCTTTACTGGAATTCAAATGGC
AGCCGATAGATGATGCTCTTCTAAGGATATACCCAAGACTTTACCCTATC
CATGAATTGGGTGAACCTCATGATGAAAGCTACGCTGGACCATCGATATT
GAGTGCATCAGCTGAAAGATTGAGTCGACAAGGAATTTACCTCATGGATA
ACGGAAGGcaACTCTTATTTTTCGTTGGACGAAACGTGTCAGATGAATTT
ATACAACAACTTTTCAACATTCGAACCTTCAATGAACTTCCGGAACGGAT
GTTCCAAATACCCGAACTCAACAACGATTTCAACAAAGAGACGAGAAAAT
TCTTGGATAAAATTCGAAAGGACAAGACTTTCAATTCACCACTTCAAATT
ATTAGGGAGGATACGAAACACCGAGTaacatttttgaacaatttgATCGA
GGATCGAACAGAATCATCAATGTCTTACCACGAATTTCTACAACATGTTC
AGAGGCAAATCAATGGTTCTTGATGATGAAAAAAACATTGCACGGAATGT
TGTTGGCTGGTGGGATTTCCAGGATGAAACGGACCTGCTTTGTGTCCGAA
CTAGGTTGTACTTAATGCGCTGTAAGGGCTAACTGATGACCCTTCGATCT
TCGACATTAATAATAAACAACAGCTGGTTTTTCAGTTCACTGACGATGGT
GAccttaaaaataatttgaaaatcgCCTTTTTTACCGTTGAATCATAAAA
TGTATAGAGAAATTATTTACTAGAATTTATGTAAATTGCTAATTCCTCCC
TCTCTCTCtcctttctttacaattttttagaattcttAAAATACCTCCTC
ATTTTTTGATGCATGGTTTTTATTCCTTTTCTAATGCCATTCTCCATCAT
AACCTTTTACAAGATGCTAAAATTCCCATCCATTCCCATAAAATACACAG
TTTTAAAATTGTAGTGTCTGTTATCAAAATCttgtacttttttctttcaa
atgaatTCATAGAGTGCCATCCCCTCCGAGAATCTTCTTTTTTAGGGTCA
TAGTTTTTGACCAAATTATTGTTAAACAATTATAATGAATTAATTATAAA
GAATT

Run BLAST on NCBI

protein sequence of TCONS_00007834-protein

>TCONS_00007834-protein ID=TCONS_00007834-protein|Name=TCONS_00007834-protein|organism=Clytia hemisphaerica|type=polypeptide|length=970bp
MSAPYPGMPPPNSLGHQTVNRPQVPNGLPMNNQQRSNMNQARMPAMSQPP
TYTPQPLTKPINNIASQPRLNAPPALNQIPFGAPTNLRQPTSMPNTQMNG
HQPTNSPVKPGQVVPPASLPNGQMTQQPGLPRGRRPYPTMSAPATLPTTT
QQPSGQRASTQPQTQTMTSQMDRMQLSGQTSPRQPPQTQTQPSRTNQYPQ
MPANSYNQSNTNDQNQLNKRLTVQQSQTFGLNLIEQRNIIPPQPISPPTP
PISEELQRKNAKTKTMRCTFNAVPQTSNLLKQSKLPFGVYIQPFRDDPNI
PIVSSVITRCRSCRSYLNPFVSLIDHRRWQCNMCFRINDIPEELTFDYNN
RQYQDVRKRPELNHASIEFIAPAEYMLRPPQPSCFVIALDVSYNAIGTGY
LRNVCKIIANNLDNLPGDSRTMIGFVTFNSSVQFYSLKANQSQPQMHVVS
DVDDIYLPVPDGLLVNIKENKEMILQLLESLPTSFDKEIDTKCATGAAML
GAKKLVTSVGGRITVFQSCLPNVGPGKLTLRESSNISTNAKDIANLNPTT
DFYKKLALECAGEQIAIDLFILAGQYCDLASMSGVSRYSSGAIHYYPDYH
HTQNQPMVEKFTHDFARYLTRAIGLEAVMRLRCTKGMSINTFHGNFFVRS
TDLLSLPNVNPDHSFGMQIDIEDNLTETSMVAFQAALLYTNTKGERRIRV
HTIALPVTSKLSDIYAYADQEAIVNTLSKLAADRTLMSSLGDAREALMNA
CIDCLKSYKHEVANQKHNSALISPFQLRLLPVNILAMMKNEAFKLGSSVS
LDQRVYSLLEFKWQPIDDALLRIYPRLYPIHELGEPHDESYAGPSILSAS
AERLSRQGIYLMDNGRQLLFFVGRNVSDEFIQQLFNIRTFNELPERMFQI
PELNNDFNKETRKFLDKIRKDKTFNSPLQIIREDTKHRVTFLNNLIEDRT
ESSMSYHEFLQHVQRQINGS

Run BLAST on NCBI

transcript from alignment at sc0000080:438521..456522+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007834 ID=TCONS_00007834|Name=TCONS_00007834|organism=Clytia hemisphaerica|type=transcript|length=18002bp|location=Sequence derived from alignment at sc0000080:438521..456522+ (Clytia hemisphaerica)
GGACTGGGGAGAGTTCAAATTGAACTTTGAAGCTTGCGTAAAAACATTGG
TGACAAGAAATTTTATCGAAAACAAAGATGACGACTGAGTAATATAATCA
AGGCAGTGAATGTCAAATTATGTAGAATTATGTTCAGGAAAACCCGTAAT
ACGATAATTGTATCATTAGTTAGCTATTGTATGCTTAGTTTGTAAGATTT
TCAACAAGAAATGAGTGCTCCATATCCAGGAATGCCACCACCCAATTCTC
TTGGTCATCAGACTGTCAATCGACCTCAAGGTATATATTCTTTGTAGTTC
CTCAGAGATCAGCTTGAATCTTATGATTTTGCCTGGTATTCAGTTCCCTC
CCTGCCCCAGTATTAGTCTGGCTGATAAAAATTTGATGCAGCTTTTGTTG
CgcaaaattcagaaattttaacAAGAACGCCATTTTAGCATTTTAGTAGT
GTTAGTGTTGTTAAATTTCTTAACTCTTGCGTGATGAGCAGGCTCTCACA
AATCATAAACTAGTCAAAtcataccgtgagtggtccaaaatccgacagcc
ctgcctaaatccaatggggtctttcaaagataccgtcaactgctctaatt
tgggacgattggtcgaaacatgggactggttgatatctgcatggtctgta
ttttcacttactgttaaatctctttgacaacaaatttgttttcctgtgcc
tatattttttaatacgacgttcattaagtcaaatcaaatgactttggccg
aatggtggccgaattgctgtcccatgttttgtcagatagtcccaagttag
agcagttgacggtacaaactgaaataaaaacaaacctttagcTGTAACAC
AATGAAAATAGACAGTgtcttttcgcctttccatcagccatattgaattg
tatgcaaaaattatggttgccgaatgggttattccatttttaaaccatac
aggggtattgacgaacttttccagacgatctcaatcgaacggaatcgacg
atcgaaccagtcaaaccaaatcgaacgcaatcgaccgattgaaattcgat
tgtcgaacgcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNttgactggttcgatcgttgattccgttcgattgagattgtctgg
ctttattcttgcagcttcccaacatgcaagctctcaaacatcacaagccg
aatgaaattacttgcgatttcccgtagaaattatgcgatgaacaatccgg
gggtcaatgaatcgacgatcgaacgcaatcgaacgcaatcgaacatcaat
cgaacgNGGTCATCAGACTGTCAATCGACCTCAAGGTATATATTCTTTGT
AGTTCCTCAGAGATCAGCTTGAATCTTATGATTTTGCCTGGTATTCAGTT
CCCTCCCTGCCCCAGTATTAGTCTGGCTGATAAAAATTTGATGCAGCTTT
TGTTGCgcaaaattcagaaattttaacAAGAACGCCATTTTAGCATTTTA
GTAGTGTTAGTGTTGTTAAATTTCTTAACTCTTGCGTGATGAGCAGGCTC
TCACAAATCATAAACTAGTCAAAtcataccgtgagtggtccaaaatccga
cagccctgcctaaatccaatggggtctttcaaagataccgtcaactgctc
taatttgggacgattggtcgaaacatgggactggttgatatctgcatggt
ctgtattttcacttactgttaaatctctttgacaacaaatttgttttcct
gTGCCTATATTTTTTAANTGTTCGACAATGGAATTTCAAtcagtcgattg
cgttcgatttggttcgactggttcgatcgtcaattccattcgattgagat
cgtccggacttttccagggggtctgaaccttgattttccaaggggttttt
gttcctttttcagattttccaaggggttatTGAAGCtttccagggggttc
tctcctcctaaactgacatcaatagttattttccaggccctttttcactt
tccaggggtgTCGACCCCTAGTTTCCAGGGGATagtttgttatccaaaat
ttccaggggggttagtgaaaaaagttcgtcaatacccctgtacaattttt
ttttggaatagccctaATTggcgtggtgaaattccctttagaaagtatgc
aaaacatatgcaaaaagaaagtattaatatgaAATTACATGCCTAATTGG
CATtgtattaaagtgtaatcttgtagaagaaagattaaatttgcttcttt
tgaaaactagaaataatcaaattcgctcatctcttagaacaagcacttca
aaaaaccataacattagacataaactcaagctgaaaaattacccgcaaag
gtacaaaaataatccttatttggctaacagtaaattattctcctggaaat
agaaccgccaaacgatcaaatcaaaacgtgtgacgtcataattactgctt
tcagtttgcgtgttttaaaagtttcatttgtgtactccgtcttggtggaa
ttttttaatggcatgaaaacagaatatgcaatgactttaaaaataaattt
ctaaaaggcttttgttgttctgtatatatttctttttggatcaagaaatt
ccatcttttgttgttctaatgattataatatttctttatactGTAAGATG
CTTTGTTGGCTTTTAAATCTTTATTAAAACTTGCACATGTTTTGCATACT
TCCAACTAAAATCCAACCACAACTTTTTCGTTCctttatttttgcataca
attcaagatggcggatggaaaggcgaaaaggtctataacaaagtgtcaac
taaactgagagatttgatacactaaaccaattgaaccaaacaacaataat
tttttattacaaaattgttaacgttttaaacacgagcaacagattcagaa
taatagaggtatttatttttacaactcactttttttatcatatcaattga
cattatagtcatcttgttagatgttttgtttcgagaatTCTTGcaagttt
attgttcaacttggagaggaaatgtttgtaaacatagaatttttctcaTA
GCGGTTATTttgggggtcggatttaggcagggctgtcaaaTTTAGGAGCA
CTCACGGTACCATTTTATAAACAACCCACAAAAACCAGTTAGATTAGTTT
GTGGAAGCACTTGGCACACACAAAATGTCCAATGTTGAATCAGAACTTTT
ACCGCACCTGATGACAAATAAAATTACTAAGAAAAAAGTCAAGTGTCATC
AAGTTTTCGCGTAATCAGTGTACATAACACTAGACAAATACCAGATAGCT
TTGCTCGATGTAACTTACACCAGACGATGTTAACTGTACATTATTGTCCT
AATTTTCGTAATCGAACaattaaatttcatcgaactaatcgaacgataac
tgtttgattggttcggaaccaaatcgaacagtaatcAAACTTTACGGAAA
TTACTGAATTCGATTATATAGTTCAATAACAATATATTGTTCAATTAAGT
TCGTTTAGAGTTCTATTATAGTTTGTAGATCTTAAATAACGCTGTTTGTT
TTACAGGGCGGGCGCCAAATACTTCTTCCCCCCTGATGGGGCATTTGTTG
CCGCCCCTGAGAACAAATAATGGTCGAGGTCTACAGAATTGAAATTGAAC
ACATTGAACAGTTATCGAACAAAATCAAACTTTACCGGGATTTCTCGGTT
TGACAACTGTTCGATGcggttcggtaatcaaacagcTTTAATGGAGGacc
ttttttaacaaaatttatttagttttttaaaGGGAAAAAAGGGCTGGATG
AGCAATAAAGTGCTGCAGATATAATTTTTCACATGTTCAAAAATTCAACA
GAATCAACAAATCACCCAAAAAGACATGATTCAAAGGGCAAAATGCAGAA
AATGTATgctaccgtagagtcgtttaatctcgacatacgtcttgcaatct
cgacaccggatctgtagaataatcaaaacaaaccttgaatgaaattcttg
gtatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNaaaacgcatgcaaacttcctcgtaactttctcgtgt
ccatcattaaaattttacaacttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTAtcaaaaacacacgctctaggcgctaagaggcc
gcacgccgtgatggccagtatggcggtcacattaaattcaaaaggaaacc
gggttatttttattattttcggttcacggtaaaaatgtctactaaaaatt
cctcgcgtgcaaaatgttgtgttgttgtgatttagacatcttcgttgaaa
gcatgccaattagtttttagcgattactacatcgttaaagttttcttttc
aaatataagtataagtaataacacttcacatttttcatattatactgtta
tattaacaatctgtgacgtgatagagagagagtacattttagtgattgat
tgataactttggtatgtatttgtttatgtttgattttttatttcgaagac
cagcctacagctatgtcgagattgcaagacgtatgtcgagattaaacgac
tctacggtatcattcgattagtttgatgaaattcgattagtttgattgtt
cgATGGTTCGACTGACAATCGTCTGGCTTAAAATAATATATACTTTTCGG
CACCAGACAAAAACACTGGACAGTCATGTTGACAAAGTCGTGTTCGATCA
ATTAGGTATGAAATTAGATAAGGGATTTCAACATTGACCTTTTGAGGATA
CCATTTTGACTCCATGAAATTACACTTTAATCTGCTttaatgaaaaaagt
tttcaccTTTAGGATCTCAAAATTTTCTGCCTAggaatttttcataatca
ttTTTGACAGCAGGgctatttttgtcaaaaagtgttaCCATAAGTTGGTC
TGGTGACCTTTTGAAAAGATACCATTTCGACTCCATACCTtcgttttgca
taagattcctTTTCCTGCTTAGATTTCCATTGCCACTTTACCGGAAAAAG
ACCAGAACTctagttgaaaaatgagcttctAAAAGTTAGGCCGTTTCGTA
AGTAAACACAACATTTTCCTTTGAGAAAACCCTTTCCAAATGCATGCTGG
CTATCCCAAGAAAAAGGAGGAAAGATCATGTAAAGTCAGGAGAATCTTGG
GGGGAAGAGAATCTTATGCAAAGGGAAAACATTATGTTATGATTCCACAC
ACGCAATTAGCCTGATAGTAGCAGGGGGGTCGATACTAAAATCTACGACA
TCATGATGTTTAGTGACGTGTATAGCCAAAAAACTCAGAAATCCTTTTTC
TTTTAACAAAAAGGTGCTATCCAAGAAGGTGCTATCCAGACTAAAATTTG
GGAATTGTCTTAGTAAATCGGTACTAAAATTAGTagttttcataatttta
tgAATCTTtaattatgaattttttgtgtcttttttcagaatttttgcaaa
tttcaaaaaagaaataaaattttctcatttaaagaaaatttcccaagttc
aattatttttgcaTTCAGTCAAATGTCTTTAATGTTTGCTCAATTCATAA
AGCAGCATTGTTTAAAAGTATCAGTTTTTGAgaattaaggtatgtgttca
ccttccttgacacattctctttaattgatcatatctttagaacaacaaat
ttttatacatcaaaagtatatattttctgaaagccNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtga
caaaaaatcggaaaaaataaaaaagaaatgtgATTACAGCTTTTACTCAT
TTTTAGTTTGCatttttattttgcattttgCTCCTTTGGGTCATATTTTA
CCTGAATTCAGGATTCTTTTCTTGAAAAGAGGTCACTTAAAATTAGATAT
CTACACATTTAGAAGAACTGCTTTTTGATATACATGTGACCCTGGTATAC
CTAAAATCCAAATATGGTATACAAAGATACCTTGTAATTGAGTCCCACAT
TTTTCCAAACCAcggaaatagaaaaaaacatttccagGAATATCCCTAAA
GctaattttttcagattgtaAAAAAATCTGAAACAAATTTGGGCAGGGTT
TCATATCTTTGtccattttaatattttcttggaATCTAAAGAACTTGAAA
AAATAACAACTTTTGACTTTCCACCTTGTCCAGTAAAATGTTGACCATGA
ATACCCAAATTtgactcaaaatcaaaatttttacttaATTTGATTTGCAA
ACCCAGCAACTGGAGGATGTTATAATGATTTCCTTTTTTATAGAATGTTA
TGATAAAATCTTCTTTACTTGTTATAGTACCCAATGGATTGCCAATGAAT
AATCAGCAAAGATCAAATATGAATCAAGCAAGAATGCCAGCAATGTCACA
ACCACCTACCTATACTCCTCAACCTTTGACCAAACCAATTAATAACATTG
CTAGTCAACCAAGGTTGAATGCACCACCAGCACTCAACCAAATTCCATTT
GGAGCACCAACTAATTTACGCCAACCAACATCTATGCCAAACACTCAAAT
GAATGGACATCAACCTACAAACTCACCTGTAAAACCAGGACAAGTGGTTC
CTCCTGCAAGTCTTCCAAATGGACAAATGACACAACAGCCAGGTATTTAC
TGCAAACCACTTTATTTCGATTTCAAAGAAGGGTTAGAAAGAGGGATATT
CAgatgaaagatttttcattttttataacttATTATTTTGTCGATATTGC
CtgtcaaatattttcaattaataAGACTAAAATTTACTAGAATTAGATTC
ATCTAATGTGACTCTTTTAACTTAAACATTTTACCAGTCCTAGAAGATGG
TTGTGAAATTTCTATGCTGAATTAGTCATTGGTTGTCCGAATCAAAGGAT
TGATAAaaaggtgttttttttattttatttcaaacaattttagTTGTAAG
TGATgtctatttcatttttttaggaTTACCCAGAGGAAGAAGACCCTACC
CAACTATGGTATTTAGATTTTCACTTAAATTTATGGTATAGAGAGAGTTC
TTCTTTCATTAAGAAGGAAATTGGTTaacaatttgaagaaaatgatttta
aaacttatattacaaatctttaaaaagtgcTCTTGAAAAAGATGTTGCTG
GTGTCATTAGCATCCAGTGAtcattattttctatttcatcTTAGTCTGCC
CCTGCTACACTACCTACCACAACACAACAGCCTTCTGGACAAAGGGCCTC
AACGCAGCCACAAACACAAACTATGACCTCACAAATGGACAGAATGCAAT
TAAGTGGACAAACAAGTCCTAGGCAACCACCTCAAACACAAACTCAGCCT
TCCAGAACGAATCAATACCCTCAAATGCCTGCTAACTCTTATAATGTAAG
TACTTTAtacacaaaatttcaaatattaaaataatCCTCTCATCTTTGTG
TTCAAAGTTAATCAATCTAAAATTCATCACATTGAAGCACAACATATAAT
AACTTAAGTCTATCTCATCTTTTCACAGCAATCTAATACTAACGACCAAA
ATCAGCTAAACAAACGTCTCACAGTTCAGGTAACCCACATTCATCATATA
TAGAGCACTCATCATAAAACATTCATCAACATGCATGATCTTCCTTTAAA
TACaaatgttaagaaaaaaatccatcacagaaaatgtaaaaaaatttata
aagataTTATTTCTAATATTTCTAATATTTCTATCTAGCAATCTCAAACT
TTTGGTTTGAATTTAATTGAACAACGCAACATCATTCCTCCGCAACCGAT
TTCACCACCAACTCCCCCAATATCTGAGGTTTGTATCAATTTTGTTTTAT
ACTGTAAATGAAATTCTCTCAAAATTCTATATTTGATAACATGAAAATGa
ggttaactttttgagttttttttctgaaagtgtTAAAGTCTATTATTATT
TGCTCCCTCATAGGAATTACAAAGGAAAAATGCAAAGACAAAGTAAGTTT
TTGTTAGAAGCATCTCTCAACTGTTAAATTCCAgtgtgtctgtgtgtatg
tcccaaaactttggggtagcctggagacttcaaaaattgttcgatttggc
tgaaattttgcacacttgttccttgggtgaatatctgggggtgctttttg
catttttcaaaaatttagatttttggggcctagggacgagttttttgcca
aaacaaggctaaagctttgaagcagcctacaggcctccaaaatggtcgga
tttggttgaaatttggcacacttcattgggtaaatatctgggggtctaca
attgagcctatgaataatttgaagccactgatgttgagcccagtgcgttg
cgcacgttcgactattttttgattcttgctagtaaaaacaaaatgattga
tgtctttaaataaaattttacttaGAACAATGAGATGTACGTTCAATGCT
GTTCCTCAAACATCAAACTTACTAAAACAATCGAAACTACCTTTCGGAGT
ATATATACAACCATTCAGGGATGACCCGGTAAGCTCATGGCTTTTGtaat
gataaaaattttctaacttgcaatagaccttttcataaattacgtcacga
acatcacttgcctcgtattcaaataattaccatggtgattatgccCCTCG
AGACattaaatgacttttttatgaatagaaagtagttttgataaaatccg
ctgggagttaatcaccatggcattaattttaaaacgaggcaagtgatgtt
tgtgacgtaatttatgaaaagatctattGAAACTGTAAGGAAGCAGAACT
AAGCTGATATTATGATTTGGTATTATGATTGTTATATGTTATAggataat
atatattatataaagaagaaaacaaattccGAATAGGTGCATCTTCgaga
aactcaaaatttaagttatcaaaaagaaTAACACATGATGTAAAATATGG
TCGATATTTCGATTCACTTGCTAAATCATTATCAAGACAgagtaaaatga
aattctaaaagcatTACTTTATGTACAAGTTcagtaaaaattagaaaaat
tatgaaatgcaTCAAGGGAATAAAACGATtgctaaaacaaaagaaagaag
gaCTAAGGGGAATAGAGACGCAACAGAAGCGATATGTGTCAATGTAATAA
AATATAGTTTTGGATGAGACGATCATATTTCCGGAGATGTCGATCTGATA
CTTGTTTTTCGAACTTCGACATGACAAAATTGATACTGTAGATAATGCAT
TTACGTTTCATCCAGGTAGATTTTGATACAAGTTCATCCGTGCAATCTTT
CTGCTCCTTCTTGAGTACCTTCAAACGTTTATGTTTGgcagaaatttcat
taaatagaAGCTTACGGTAAAATTTTGAACGAGATTTCATGTCAATATCT
TTCAACTGTTTCAGTTTTGTAAAGTTTGGCGTGATGTTTGTGTCGCGACA
TTTACATAAAAAGTTTAAATCCAATTTGcatttcaaaactttcttgTTGA
TACGTTCTAACTTGACAGCAAGCTTATAGATTTCGTTGTCGGTGGTTCGG
AGGTGAAACCAGAATCCTTTTCCAGCCGAAACATTgattaaataaagaag
aaaacaaattccGATATATTATATGTACATGGATAATATGTttgtataat
atatattatagTTAGGTCTACCATCTTGCCCTGACAGTAGCGATCATTGT
TTGAACATGTGACTAGTCTAGATCTCTACTGACCCCCAGTGCACTTCTCC
TTTGAGTTCCTTGCTTTGAGATTGTGCCAAGTGAGTTCTCCTCCTTGTGC
CATGTGGTTTTGAGAGTCCATTCTCTCCAGCAAGGACAGTTGAAGCCTGA
CCATCGACAAGACAACAATGAATCTTTATATTCATTTAACTAGTATATTG
GCATGATAATCCAGATCAGCTAAGATAAAGTTTGGGATTATTTGGACAGT
ATGtcttcattgtcaaatatatatCTAGTATTTTCTTCACCTATCGTTCA
ATCTCATCCAGCCCACACTAGCATATTCTGCTTTCTCACAGAACATCATG
AAAACTTTTCAATAATAATTGtgaataaataattttaaaataaaaaagtt
ttgtaaTAATAGATTTTTACCAATCTAAATTTCTTCTATAGACTAAACAA
GCTATTTTATCTTTTACAGAATATTCCAATCGTGAGCTCAGTGATCACAA
GATGTAGATCATGCCGCTCTTATCTTAATCCTTTCGTTTCACTCATCGAT
CATCGTCGTTGGCAATGTAATATGTGCTTCAGAATCAATGACAGTAAGTT
TGCATtgttgagttttcttcattagATAATTAACTTTTCAACGCAgtatt
ttaaattgtttattCAAACTAAAGACCTTCAGATTAATAAAGAAAGAGCA
AAgctaatttattttttccttgttttattttcagttcCAGAAGAACTAAC
ATTTGATTATAATAATAGACAATACCAAGATGTGCGGAAAAGGCCTGAAC
TAAATCATGCATCAATAGAATTCATAGCACCTGCAGAATATATGGTAAGG
AGATAATGTTGTATATCTTATGTATGATCCATTATGAAACCTTTTTCTCC
TAaagagattttttgattttatgttgTTTATCTGCTATAAAAGCATGTTT
CTTTGGTTTTAGCTTCGTCCACCACAACCATCTTGTTTTGTTATCGCTCT
TGATGTTTCATACAATGCAATCGGAACAGGTTAGTTAGTTAACTTGATTG
TTTAAATAGTTTTTGTTTACTAAACTGCACTTTACTATGTAGTGCTCAAA
GTTCTTCTGTCTCATATAGATTTCAAGTCCCATCTGAGAGGGAATTACAA
GCATATTACTATTTCTCCATTTATTCAAGCTGCTAAAAGTGAAATTTATT
AGTTTtacatattttcattttattttNGACATATAGATTTCAAGTTTGTG
TAAAGTTCACTTCCCATCTGAGAGGGAATTACAAGCATATTACTATTTCT
CCATTTATTCAAGCTGCTAAAAGTGAAATTTATTAGTTTtacatattttc
attttatttttctgttttgcaGGATATCTACGGAACGTTTGTAAGATCAT
TGCAAATAACCTTGACAACTTACCTGGAGATTCAAGAACAATGATTGGAT
TTGTTACCTTTAATAGTTCAGTACAATTTTATAGCCTAAAGGTAAGGGAA
TTCCCAAATATTTTATACAAacataggctacgtcatatcttcctccgttt
cgagcgtaaaaagGCCTAAAAGCCCGGAGCTGTgtattgtgtagactaat
aCAAACATCGCTTATTAcctatcaaaatatttattttgattaaaaattgg
AATTATTCGACTTTCTCATCCACGAAGcactgttttttatctttttcgaa
atttgacaaAAGTTTATAACTTTAACAGTGAAAGTGTGAAAAGAGTTGCA
CAATTATTTTGGTACATAACTAAATAAGTGATCCTCTTGAGTTATTTACT
ATGATGTGTTTTGTAGGCAAACCAAAGTCAACCACAGATGCACGTAGTTT
CAGATGTCGATGGTAAGTGAtgacttttcattctttttcacctTATAGTG
AGTACAGTAAAAACTACATTCCACAATACCTTTATAActataataagcag
atattcgacaagaaaaatcggatatcgaaaattattcagtcgagcttgat
gatattcaacgaagcgaagctgagttgaatatcattaaagcgagactgaa
taatttcgatatccgatttttcacgTTGAATATATGGTTTATCGTTCACC
AATTAGCAGAAAAGCATTTTAATTTTCCCTATTTCATTCtgtctttctct
ctttttatgacattttcgaacgttttactatCTTATTTAAAGATgtcaat
ttcaatgtttttctctttaattacaaaacgttcgaatttcctttctcttt
tgtttaaaagaactttctttttatctgtttttatatATGTGACatttaaa
tatttatttgatcacaaaattattttctttatgcTCGCTGCTACAGAAGA
GATATTTTGCTATCGGGTATCTAAAAATAATCGACAGTGCGTTTTGCTTA
GAGGTGGACGATAaactaaaatatttcaaaatcatctTTTAATCTGTTTT
CAGATATTTATCTACCTGTTCCCGATGGTCTGCTGGTCAATATCAAGGAA
AACAAAGAGGTATAAATCATTTTGAGTATTTCTTCGAGTATTACTTTGAA
TTACAGAATCAAAATTTGATACCCAAAAACATTATTCATTagcattttta
ataaaaatttaaactaCTACTACTTTTATTacttagtttttatttttatt
ttctgtaGATGATTTTACAATTATTGGAATCTCTTCCGACATCATTTGAC
AAAGAAATCGATACCAAATGTGCAACTGGTGCTGCTATGTTGGGGGCAAA
GAAATTAGTCGTAAGTTGATTAGAGTtcctttgattttaatttttctgat
tATAAATTAACAATGATTTTCAGTCCAATTTTCTTCACTTTAAACTTATT
CTTCTTAAAATTCCCATCTTACAGACATCGGTTGGCGGTAGAATAACAGT
CTTCCAATCCTGTCTTCCAAACGTTGGTCCCGGTAAATTAACTTTACGAG
AAAGCTCAAACATATCTACTAATGCAAAAGATATTGCTAACTTGAACCCG
ACGACAGACTTTTACAAGAAATTGGCATTAGAATGTGCTGGAGAACAAAT
AGCTATTGATCTTTTCATATTGGCTGGCCAGTATTGTGATCTAGCTTCAA
TGTGTAAGAATTGATATcagtattttttatttacttttactgTTAAATCG
ATTTCAAAGCAAAGTGATGAATTGATAAATATCTCTTTtctttgaatgaa
tgaataaccAAAACTTCTGTCATAAAAGTGCTACAACTAgttctaaaatt
aatttttattcatttacaGCGGGTGTGTCAAGATATTCTAGTGGTGCAAT
CCACTATTATCCTGATTATCATCACACACAAAATCAACCGATGGTTGAAA
AGTTCACTCACGATTTCGCGTAAGTCTGTCTTTAGCCCTAACATGATCTT
CAGTCAATACAGCGTATTGTAGATTTTATGTAAATCAATTTAATATTGTT
TAAAACTTACCAGCAGTTACCAGAATTTCTTTCCTTTCCTTTTAGGCGAT
ATCTGACAAGAGCTATCGGTCTCGAAGCAGTCATGAGGTTGCGATGCACC
AAAGGCATGAGTATCAACACATTCCATGGAAACTTCTTTGTGCGGTCAAC
AGACCTTCTATCTTTACCCAACGTTAATCCTGATCACAGCTTTGGAATGC
AAATTGATATTGAGGATAACTTGACGGAAACCTCAATGGTGGCATTCCAA
GCAGCCCTATTATATACTAATACTAAAGGTACTAATACTTTTTCATAAGT
TTTATTTCTTTTCGACACAACTGGATGGATTTCAATCTCTCAAAATCTTA
AGGGAACAGAGTTATTTAAGAGAAAAAATGAGTGAGATATTTTTCTTCGC
CTCTCCTCTGAGTTCTTCATTCAAGCTTCATAACGTTTTTTGGTCTAAAA
ATATTGTACATAACTTAAGCACTTCAGACAATATTTGAGACTAAAACCAA
GGTTGAGACTACAACAACATTAATTGTTTTACTTTCCCAGGTGAACGAAG
GATACGTGTGCACACCATTGCTTTACCTGTCACTTCAAAACTAAGTGACA
TTTATGCTTATGCGGATCAAGAAGCTATTGTCAACACACTCTCAAAACTC
GGTAAGAACACCCGTCCTCGAAAACTTCAACTTGCTTTGTAGAACTTCTT
TTCACATAACATTCCTCCCATTAGATCTCATATTATGTACTCCATTAGCA
ATTTTTAGGCCCATTAACtcttataccgggtgacccacgaaaaagttcgg
acgtttctcggcgtcttgaggccgaacaaatgtcccaaagtgcttggagt
tttattatttagaaagtagatatNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgagcttttaaactcaaaattcacttttcgga
aagtgtaaaaaacaggtaaaaaaggggtatcaaattaggtatttttagac
gtttttgatatacagttttagagaaaattccttgaaagtgccaattttga
taaaaactagtcttgttttaaacaaaaactactttcaaacgtgtttttaa
taattattaatgtcataaaactcgttaaataagtcaatttataagagatt
ttctaattgattgcattaatttaatacctcttttttacgtgttttttaca
cttttcgaaaagtgaattttgagtttaaaaggtcaTAAGAAGAGAActat
ttggtcaaatttaaaaagtgatagctcaaattttaagttaggatatctac
tttttaaataccaaaattcggagcactttgggacatttgttcggcctcaa
gacgccgagaaaggtccgaacttttttgtgggtcacccggtatataaaAT
CTCTTGTATTTTTCAGCGGCCGACCGAACGTTAATGTCTTCCCTTGGAGA
CGCACGGGAGGCTCTAATGAACGCATGTATCGATTGTCTGAAGTCGTACA
AACACGAAGTGGCAAACCAGAAACATAATTCTGCACTGATATCACCTTTC
CAACTACGTCTATTGCCTGTCAATATCTTAGCCATGATGAAAAATgtaag
tgttttttttcattatatCTAAAGTTTGACGTACACAGATAGATTTTTTG
ATCGCCCTCTCAGTATAACAGCCACTAATTTTTTGTCTTTATACTTTTAA
ACTTAGGTACTATGACATCTCCAAAACAATTTAAACTGTTTCTATTTTCA
AAGAACCAATAATGTACTAAAAGACTTTCTATTTCCTTTTATCTTTACAG
GAAGCATTCAAGCTTGGCAGTTCAGTATCTCTGGATCAACGAGTTTATTC
TTTACTGGAATTCAAATGGCAGCCGATAGATGATGCTCTTCTAAGGATAT
ACCCAAGACTTTACCCTATCCATGAATTGGGTGAACCTgtaaggaattct
tcaatcttctccattttcaatcaaccaaaatattttttgatttctacCTT
ATCATGTTTTATTACCTTAATCCACGACTTGTTTTCGTTAAAGGACCTTC
TTTATTCTCTATATTTCTTTTCCTTAGCATGATGAAAGCTACGCTGGACC
ATCGATATTGAGTGCATCAGCTGAAAGATTGAGTCGACAAGGAATTTACC
TCATGGATAACGGAAGGGTAAGTTATTGTATTAAAATCACCAGAAATAAA
AAAGATCGACATTTGCACAACTGGAGGTTGTGTTATTTTTTAAGTtgctc
aattttttgatttgatccCTTAGATGGAAGTTCTgatcaaaatttcttct
tttgttttcagcaACTCTTATTTTTCGTTGGACGAAACGTGTCAGATGAA
TTTATACAACAACTTTTCAACATTCGAACCTTCAATGAACTTCCGGAACG
GATGGTAAGTTTTGGTACTCAGTGAATTACCAATCTTGTTAGTATTTATT
CAGATGATGGAACACACCACctatgagaatttaaaaaataaccaaaaatc
aTTCAAACTTATTCTTATTCAGTTCCAAATACCCGAACTCAACAACGATT
TCAACAAAGAGACGAGAAAATTCTTGGATAAAATTCGAAAGGACAAGACT
TTCAATTCACCACTTCAAATTATTAGGTAAGGcattgttttttgtttggt
ttgaaaTAGTAGGAAAAATACCTAAACCTAAAAGAATGAGAAATCTGTAT
CAATAGCACGTTTGGTTTTCTCAGGATCAAGCTGAACAATTATAGAGAGA
TGTAGTTAGAAGTAAACTagtattttcatgaaaattccTTTTCGAATTTC
AGGGAGGATACGAAACACCGAGTaacatttttgaacaatttgATCGAGGA
TCGAACAGAATCATCAATGTCTTACCACGAATTTCTACAACATGTTCAGA
GGCAAATCAATGGTTCTTGATGATGAAAAAAACATTGCACGGAATGTTGT
TGGCTGGTGGGATTTCCAGGATGAAACGGACCTGCTTTGTGTCCGAACTA
GGTTGTACTTAATGCGCTGTAAGGGCTAACTGATGACCCTTCGATCTTCG
ACATTAATAATAAACAACAGCTGGTTTTTCAGTTCACTGACGATGGTGAc
cttaaaaataatttgaaaatcgCCTTTTTTACCGTTGAATCATAAAATGT
ATAGAGAAATTATTTACTAGAATTTATGTAAATTGCTAATTCCTCCCTCT
CTCTCtcctttctttacaattttttagaattcttAAAATACCTCCTCATT
TTTTGATGCATGGTTTTTATTCCTTTTCTAATGCCATTCTCCATCATAAC
CTTTTACAAGATGCTAAAATTCCCATCCATTCCCATAAAATACACAGTTT
TAAAATTGTAGTGTCTGTTATCAAAATCttgtacttttttctttcaaatg
aatTCATAGAGTGCCATCCCCTCCGAGAATCTTCTTTTTTAGGGTCATAG
TTTTTGACCAAATTATTGTTAAACAATTATAATGAATTAATTATAAAGAA
TT

Coding sequence (CDS) from alignment at sc0000080:438521..456522+

>TCONS_00007834 ID=TCONS_00007834|Name=TCONS_00007834|organism=Clytia hemisphaerica|type=CDS|length=2913bp|location=Sequence derived from alignment at sc0000080:438521..456522+ (Clytia hemisphaerica)
ATGAGTGCTCCATATCCAGGAATGCCACCACCCAATTCTCTTGGTCATCA
GACTGTCAATCGACCTCAAGTACCCAATGGATTGCCAATGAATAATCAGC
AAAGATCAAATATGAATCAAGCAAGAATGCCAGCAATGTCACAACCACCT
ACCTATACTCCTCAACCTTTGACCAAACCAATTAATAACATTGCTAGTCA
ACCAAGGTTGAATGCACCACCAGCACTCAACCAAATTCCATTTGGAGCAC
CAACTAATTTACGCCAACCAACATCTATGCCAAACACTCAAATGAATGGA
CATCAACCTACAAACTCACCTGTAAAACCAGGACAAGTGGTTCCTCCTGC
AAGTCTTCCAAATGGACAAATGACACAACAGCCAGgaTTACCCAGAGGAA
GAAGACCCTACCCAACTATGTCTGCCCCTGCTACACTACCTACCACAACA
CAACAGCCTTCTGGACAAAGGGCCTCAACGCAGCCACAAACACAAACTAT
GACCTCACAAATGGACAGAATGCAATTAAGTGGACAAACAAGTCCTAGGC
AACCACCTCAAACACAAACTCAGCCTTCCAGAACGAATCAATACCCTCAA
ATGCCTGCTAACTCTTATAATCAATCTAATACTAACGACCAAAATCAGCT
AAACAAACGTCTCACAGTTCAGCAATCTCAAACTTTTGGTTTGAATTTAA
TTGAACAACGCAACATCATTCCTCCGCAACCGATTTCACCACCAACTCCC
CCAATATCTGAGGAATTACAAAGGAAAAATGCAAAGACAAAAACAATGAG
ATGTACGTTCAATGCTGTTCCTCAAACATCAAACTTACTAAAACAATCGA
AACTACCTTTCGGAGTATATATACAACCATTCAGGGATGACCCGAATATT
CCAATCGTGAGCTCAGTGATCACAAGATGTAGATCATGCCGCTCTTATCT
TAATCCTTTCGTTTCACTCATCGATCATCGTCGTTGGCAATGTAATATGT
GCTTCAGAATCAATGACAttcCAGAAGAACTAACATTTGATTATAATAAT
AGACAATACCAAGATGTGCGGAAAAGGCCTGAACTAAATCATGCATCAAT
AGAATTCATAGCACCTGCAGAATATATGCTTCGTCCACCACAACCATCTT
GTTTTGTTATCGCTCTTGATGTTTCATACAATGCAATCGGAACAGGATAT
CTACGGAACGTTTGTAAGATCATTGCAAATAACCTTGACAACTTACCTGG
AGATTCAAGAACAATGATTGGATTTGTTACCTTTAATAGTTCAGTACAAT
TTTATAGCCTAAAGGCAAACCAAAGTCAACCACAGATGCACGTAGTTTCA
GATGTCGATGATATTTATCTACCTGTTCCCGATGGTCTGCTGGTCAATAT
CAAGGAAAACAAAGAGATGATTTTACAATTATTGGAATCTCTTCCGACAT
CATTTGACAAAGAAATCGATACCAAATGTGCAACTGGTGCTGCTATGTTG
GGGGCAAAGAAATTAGTCACATCGGTTGGCGGTAGAATAACAGTCTTCCA
ATCCTGTCTTCCAAACGTTGGTCCCGGTAAATTAACTTTACGAGAAAGCT
CAAACATATCTACTAATGCAAAAGATATTGCTAACTTGAACCCGACGACA
GACTTTTACAAGAAATTGGCATTAGAATGTGCTGGAGAACAAATAGCTAT
TGATCTTTTCATATTGGCTGGCCAGTATTGTGATCTAGCTTCAATGTCGG
GTGTGTCAAGATATTCTAGTGGTGCAATCCACTATTATCCTGATTATCAT
CACACACAAAATCAACCGATGGTTGAAAAGTTCACTCACGATTTCGCGCG
ATATCTGACAAGAGCTATCGGTCTCGAAGCAGTCATGAGGTTGCGATGCA
CCAAAGGCATGAGTATCAACACATTCCATGGAAACTTCTTTGTGCGGTCA
ACAGACCTTCTATCTTTACCCAACGTTAATCCTGATCACAGCTTTGGAAT
GCAAATTGATATTGAGGATAACTTGACGGAAACCTCAATGGTGGCATTCC
AAGCAGCCCTATTATATACTAATACTAAAGGTGAACGAAGGATACGTGTG
CACACCATTGCTTTACCTGTCACTTCAAAACTAAGTGACATTTATGCTTA
TGCGGATCAAGAAGCTATTGTCAACACACTCTCAAAACTCGCGGCCGACC
GAACGTTAATGTCTTCCCTTGGAGACGCACGGGAGGCTCTAATGAACGCA
TGTATCGATTGTCTGAAGTCGTACAAACACGAAGTGGCAAACCAGAAACA
TAATTCTGCACTGATATCACCTTTCCAACTACGTCTATTGCCTGTCAATA
TCTTAGCCATGATGAAAAATGAAGCATTCAAGCTTGGCAGTTCAGTATCT
CTGGATCAACGAGTTTATTCTTTACTGGAATTCAAATGGCAGCCGATAGA
TGATGCTCTTCTAAGGATATACCCAAGACTTTACCCTATCCATGAATTGG
GTGAACCTCATGATGAAAGCTACGCTGGACCATCGATATTGAGTGCATCA
GCTGAAAGATTGAGTCGACAAGGAATTTACCTCATGGATAACGGAAGGca
ACTCTTATTTTTCGTTGGACGAAACGTGTCAGATGAATTTATACAACAAC
TTTTCAACATTCGAACCTTCAATGAACTTCCGGAACGGATGTTCCAAATA
CCCGAACTCAACAACGATTTCAACAAAGAGACGAGAAAATTCTTGGATAA
AATTCGAAAGGACAAGACTTTCAATTCACCACTTCAAATTATTAGGGAGG
ATACGAAACACCGAGTaacatttttgaacaatttgATCGAGGATCGAACA
GAATCATCAATGTCTTACCACGAATTTCTACAACATGTTCAGAGGCAAAT
CAATGGTTCTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004444	XLOC_004444	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00007834-protein	TCONS_00007834-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000080	supercontig	sc0000080:438521..456522 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.1157	18.5237	25.584	12.9702	26.7665	21.9441	24.2874	21.0004	11.4045	17.1452	14.0567	10.2597	10.411	10.0937	14.5146	13.5144	15.4041	14.4788	7.78021	13.0181	10.7464	9.85011	15.1495	12.9879	17.1394	18.0757	20.2992	16.5582	14.3069	14.4389

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR006895	Znf_Sec23_Sec24
IPR006896	Sec23/24_trunk_dom
IPR029006	ADF-H/Gelsolin-like_dom
IPR007123	Gelsolin-like_dom
IPR012990	Sec23_24_beta_S
IPR006900	Sec23/24_helical_dom
IPR002035	VWF_A

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030127	COPII vesicle coat

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030127	COPII vesicle coat
molecular_function	GO:0008270	zinc ion binding

Blast

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BLAST of TCONS_00007834 vs. Swiss-Prot (Human)
Match: SC24A (Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1 SV=2)

HSP 1 Score: 780.4 bits (2014), Expect = 0.000e+0
Identity = 358/744 (48.12%), Postives = 541/744 (72.72%), Query Frame = 1

Query:  901 LNLIEQRNXXXXXXXXXXXXXXSEELQRKNAKTKTMRCTFNAVPQTSNLLKQSKLPFGVYIQPFRDDPNIPIV-SSVITRCRSCRSYLNPFVSLIDHRRWQCNMCFRINDIPEELTFDYNNRQYQDVRKRPELNHASIEFIAPAEYMLRPPQPSCFVIALDVSYNAIGTGYLRNVCKIIANNLDNLPGDSRTMIGFVTFNSSVQFYSLKANQSQPQMHVVSDVDDIYLPVPDGLLVNIKENKEMILQLLESLPTSFDKEIDTKCATGAAMLGAKKLVTSVGGRITVFQSCLPNVGPGKLTLRESSNISTNAKDIANLNPTTDFYKKLALECAGEQIAIDLFILAGQYCDLASMSGVSRYSSGAIHYYPDYHHTQNQPMVEKFTHDFARYLTRAIGLEAVMRLRCTKGMSINTFHGNFFVRSTDLLSLPNVNPDHSFGMQIDIEDNLTETSMVAFQAALLYTNTKGERRIRVHTIALPVTSKLSDIYAYADQEAIVNTLSKLAADRTLMSSLGDAREALMNACIDCLKSYKHEVANQKHNSALISPFQLRLLPVNILAMMKNEAFKLGSSVSLDQRVYSLLEFKWQPIDDALLRIYPRLYPIHELGEP-----HDESYAGPSILSASAERLSRQGIYLMDNGRQLLFFVGRNVSDEFIQQLFNIRTFNELPERMFQIPELNNDFNKETRKFLDKIRKDKTFNSPLQIIREDTKHRVTFLNNLIEDRTESSMSYHEFLQHVQRQIN 3114
            +NL+++RN++P  P+ PP P + E++Q+ N   +  RCT  ++PQT  LL ++KLP G+ + PF+D   +P+V SS I RCRSCR+Y+NPFVS +D RRW+CN+C+R+ND+PEE  ++   R Y +  +RPE+ +A+IEF+AP+EYMLRPPQP  ++   DVS+NA+ TGYL +VC+ + +NLD LPG++RT IGF+TF+S++ FY L+ + SQPQM +VSD++D+++P+P+ LLVN+ E+KE++  LL++LP  F K ++T+ A G A+  A KL++  GGR++VFQ+ LP +G G L  RE  N  ++AKDI ++ P+TDFYKKLAL+C+G+Q+A+DLF+L+GQY DLAS+  +SRYS+G+++YYP YHH  N   V+K   +  RYLTR IG EAVMR+RCTKG+SI+TFHGNFFVRSTDLLSLPNVNPD  + +Q+ +E++LT+T +V+FQ+ALLYT++KGERRIRVHT+ LPV S L+D++  AD +AI   L+ +A DR++ +SL DAR+AL+NA ID L +Y+  V + +    L+ PF LRL P+ +LA++K ++F+ G++  LD+R++++ + K QP+   +L  +P LY +  L +       D +   P IL  S E+LSR G +LMD G  L+ +VG+N +  F+ Q+  ++ +  +P+ M  +PEL+   +     F+  +R+ + F   L +IR+++  +  FL N+IEDRTES++SY+EFL H+Q+Q+N
Sbjct:  351 VNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSSAKDI-HMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQ-PGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSYYEFLLHIQQQVN 1092

The following BLAST results are available for this feature:

BLAST of TCONS_00007834 vs. Swiss-Prot (Human)

BLAST of TCONS_00007834 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SC24A	0.000e+0	48.12	Protein transport protein Sec24A OS=Homo sapiens G...	[more]

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TCONS_00007834 (transcript) - C. hemisphaerica