TCONS_00008253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008253
Unique NameTCONS_00008253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1513

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008253 ID=TCONS_00008253|Name=TCONS_00008253|organism=Clytia hemisphaerica|type=transcript|length=1513bp
TGAAAGTCGAAGTTGGTTATAGAGTATTATCATTCTTCAATGTTATACCT
TAGGTGTTTAGAGGAGTGTGGGgaacgaaaatgaaaatattagACTttga
acaaaagaaacaaagatgGCACTGCAGCCGCGAACGGCTTTCATATCTGC
ACTGgtgatattttttgttgttggaGCTCAAGCACGCATCAAAATCCGCA
AAATCAAATTACCTCCTCTACCCAAGAAGCCAGTTTACTTGGTGACCATA
CCACGAGTGGTATTCCCTGGTGAAATTACCACAGCCACTTTCAGTATCCC
ACCTTTGAAGAAAGGTTTCACACTAACTGTTCGTCTGAACCATCGAGAAT
CGATCGATATCAGTCAAGAGGTTGTGACGGAAGTCATGGCTCGTGATCGC
AGACAATTGATTACGATCCCGATTAGAGTAGATGAAAGGAAATTTGGATC
AGAAAAAAGGATTGTTTTCAAATTCTCAACCGACTCAGCCGAGACAGACG
AAATGCCCTTTACAGCGAAACCACTTAATTTGGAAGTCAAATCGCTAAAA
GATCGGTTATTCATACAAACCGATAAACCGATTTATAAACCCGGTGGAAA
AGTTCGATTTCGGTTGGTCAGTGTAAACAAGAACTTGAAACCAAATAGTG
AGACTATCGATCAAGTTTACATTTTGAATCCAACTGGGTCACGTGTCATG
CAATGGACCAATCATACTCTTGATGGGGGAATGTCAAGTTTCGAAATGGC
GCTATCCATCAAACCAGTCCTTGGTACATGGAAGATTGTTGCCAAATCTG
AAAAACTAAAAGCAGAAGTCAGTATTAAAGTTGAGAAATATGTCTTACCA
AAATTCAAAGTGGACATTACGACACCTTCGTATATTATGGATGATGATAC
TACCATCACCACCAAAATCTGTGGAAAATATACGTATGGTAAAGAAGTCT
CTGGAAAGTTGGAAGCATCACTTTGCTTGAAACCAAATTCTTATTTACTA
AGAATAAGATCAGATGATAAGAAAACATTCTGCATCAACATTAACAAAAA
GATTAAAGGATGTGAAAACATTGAATTCCCCTTGAAGAAGATGATGAACA
AACCTAAACGGCTTCGTTATTCAGACTCCTACAGTAAATATTCCCTCAAA
GTCATTGCAAATCTAACTGAGGAGGGAACAGCTATCAAGCAAACTGAGGA
ACACCAATCAAAACACTTCTCGAGACAACCTTAcgaaatcaaatttgaaa
ttccaaaatattttaaacctgGAATGATTTTCCCAGTCAAGATGTTGGTC
AACACACCAGATGGTCGACCAAAACAAACACCAACCAAAGTCTGGCTAAC
CATTTCTCCGACTCCCGGCCGCCGGCAAAAACGTTTAGTCACTGTTATAA
ATGGTTATGATGAATTCAATGTCTTCCCCAGAGCTGATTCaaccaaatat
attttcaatgCGGAAGGTGTTCTTCCAACCAAGAAGTCAGaagttatcaa
aaagaaaaaggta
Run BLAST on NCBI

transcript from alignment at sc0000084:91510..102199+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008253 ID=TCONS_00008253|Name=TCONS_00008253|organism=Clytia hemisphaerica|type=transcript|length=10690bp|location=Sequence derived from alignment at sc0000084:91510..102199+ (Clytia hemisphaerica)
TGAAAGTCGAAGTTGGTTATAGAGTATTATCATTCTTCAATGTTATACCT
TAGGTGTTTAGAGGAGTGTGGGgaacgaaaatgaaaatattaggTTGGTG
CAATATTGGATAGATAGAgagttgaattgaattgaattgaattgaatata
ttttcgctgcaacacagcaggataaccccttacaaaaaaaaatagatttc
tctaatacaatggggaacctagaagaNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNttttgattgacttcaaaattccTGGCGTTATcca
tggttttgtttttgatctaACTTGACGTTTGGTAAGTTTGACTGTGGGTA
GATGTCTCTCTACAAGTACTTTAATTTTgtcattaaaaatattgaaacag
gaGTCTGGATTAGTTATCGAGAAGAATAGAGTCTGCTACACTTGATACAT
TTTACAAATCTATTTTGCAGGCATTTGCATTTTTTAGAGCCtccttttga
gaaattttgaatctgttctttactttttgaattttatgcctaaaagtttt
cttaaatgttcttactttcaccattttgtgagtatttctcTGTAATCTCT
TAAGACACTGGATGATTTAGAGTCTGTAAAGCCTTATAATGGTTAATGTA
CTTCTGTATTTGAtatatcgaagccttatgctcttatatattTGTGTGTA
CAAATAGATATTTAGACTttgaacaaaagaaacaaagatgGCACTGCAGC
CGCGAACGGCTTTCATATCTGCACTGgtgatattttttgttgttggaGCT
CAAGCACGCATCAAAATCCGGTAAGTACATATTATTCTGTCGGAAATATC
AGAATTTATATTTGATATttcaatgtatagcaatgtgccctcccataata
gctttatggcaactcctaaacttgggcacaggatgtacggttacacattt
tgtggattgcattgtggagtcacaagagtgctcaaactgcgagcagcgag
caatgcataatgcaaatagtgagcgtcttaaatgaagactctccacccaa
tccaagagtgctcaaactacAAAAGCAGTGAGCCAATATTTGATATTTCA
GCgatgtttaaattttcaaaaactataaaaaatctgTGATCGAGTagtga
aaatttcgaaatacgTTTTAAGGATAAGTCAATCCACTCAAAAGTTAGCT
TTCACGTACTTCTATTAATGATGCATTTTTCTACcaaaggcaattttttt
aaacatattaCCAAACTGTTTGGAACGAACATTACAAGTACGAACCCGGG
GGGGGTGCTACCTATGCCGACCGAGGGGGTGTGTtgctgaagttcgaaaa
atgaaccctacgtgggactcgtatttttgaaaaaagtgaccctgaatggg
actgaaattcaaaagttttctcaaaattttccctattttttccaatttcc
ccCAAAAAGGTTCCACACGAGGGACCGATTCTTCTATTTTGGTGCTTTTG
CGACCGTACGAGGGGCTGAAGTATACCCTGGCCAGCGTCAGATCCCCGTA
CTGCTTTTTGCCCATGTACCCCTCCCCCGGGAGTAAGAACCCCTCTTAGT
TCGATCTATTGTTTAGAACCAAATTATATTTCAGCAAAATCAAATTACCT
CCTCTACCCAAGAAGCCAGTTTACTTGGTGACCATACCACGAGTGGTATT
CCCTGGTGAAATTACCACAGCCACTTTCAGTATCCCACCTTTGAAGAAAG
GTTTCACACTAACTGTTCGTCTGAACCATCGAGAATCGATCGATATCAGT
CAAGAGGTTGTGACGGAAGTCATGGCTCGTGATCGCAGACAATTGATTAC
GATCCCGATTAGAGTAGATGAAAGGAAATTTGGATCAGAAAAAAGGTTTG
TCAAAACgtttaatgttttttcataTATAGTTTAGCAAGCACTAATTTAG
ACATAGAAGAAAATagagcaaaaagtaatggagggaacaattttagttat
acaaactaaatccagtaacaataatcgtattatcatataacgcctatact
actgtattacacgcattataaacgactccagtcgtATATGAAATAGACTG
TATTATTAAAAAAGTTGCTTCGTCTTAAATCAGTGTCAGCTCTCTTTCTG
TACTCGTGAATTTtaaggccaaaatatttttataagcttACTTTCTTCAA
TGTATATTGACCTGAAGAGCTTAAAATCAGCATTTTCTTCAATTGTTCTT
TATTCACCCCTACAAAGcttggtcgaaatatattgagatttaacgttttt
cagaatttagagTCTTGGAGAGAATTTCAAATTTAGTACTTACACTTTAT
TTTATTGaacatttcgattttggaggggttcgatggcttctaggctatat
ttccaGCCTTATTGGAGCAATTTGAGCTTTTGAGTGAAGGATCCAAGTCT
TCAGTCTCTATTTTTCAACCGTACTTTAACGCGCTTAAAAttatttgtgg
tgtttaaaattttgcagggaaatctcctttgtctcaaatattttgtccaa
gaTTGCAGGTATTGGCCTAAATTGTAACAAGTTTTAAGCTATTCATAAAT
TGTTTTCGTAAAGCGTCATTTTACGCTTTTATTAATTTCTTTAGAGTAAA
ACCTAGACTTATCTGGTATTTTATCTGGTTTCTCTATCATTCATTCCAAG
GATTGTTTTCAAATTCTCAACCGACTCAGCCGAGACAGACGAAATGCCCT
TTACAGCGAAACCACTTAATTTGGAAGTCAAATCGCTAAAAGATCGGTTA
TTCATACAAACCGATAAACCGATTTATAAACCCGGTGGAAAAGGTATAGT
TTCTTAATTCATAATTATCTAAACATAAAGCAAGTCCTGCATGCGTCTGC
ACAGTCCCGTACAATCCATAGTTTACCTATACCAGACCCGGCAGAAACGG
GAAGACTGGGGAGACTCAAGCCTCCCcatttttgagcaaatgagtttttt
ttctcgaattcttagggaattttatctcattttgagccttcagcctcctc
ACTTGTtgttccaccgggtctgtatACCCAAAGGTGGGGAAGGACACCTT
CACTTACCCTTGACAACTGTTTGACGAGAGACATCAGGTACCCTTGCCAA
ATCATTGGTAAGACTTCAAAATACTGTGATAACTGAAGTCTGATATACTG
ATACCATAACTGAAGGCTCTACAGCGTGTCCTGGAATCGTCCTACGTCAG
AACACGACTAacaaagtaattgaaactttagagcaatccagggagaaaga
gtggtgccATCCCCTATCTTTGGTTAGATAGCTATTGAaagagccttcgg
gtcgcctccgattgcggttgcagacttacttacttaaacaCTTAACACTT
CTTACGATGCAACAAAAACACAATTCACTTATAAAcctaataaaaatttt
aattgtgtAATAAAACATCTTAAAGGAATTTCTCATATCAGACAAAGAAA
AACGACATTAAATAAAACACACAAAttctaatttttgacataccacAAAA
GCCTTTCTATACTTGAAGTCTGTTCTAACACAGGAGTTTTctgggacacc
ctgtacattcTCCGTAGTGTAAAAGTAAAGTTCAACCTTCGGGTTGGTGG
AGCTATCGACAGAGGAGCCTTCGGATCGCttgtgttgattttttttcatt
taactcattttttatttacagTTCGATTTCGGTTGGTCAGTGTAAACAAG
AACTTGAAACCAAATAGTGAGGTATAATTTTTGAATAATCTTAACAATAG
AGCTGCCTGGTGCAGCAAATGTCGTAGAATAAATTTATTGCAGTAGACTC
TTGCTAAATCGAATttccattattcgaatctttctacaaATTGAACCTCA
GTCCCTGGACAATCTTCGTAAAATGCTTTCTGAAGCTCTAATCCTCATAA
TACACCCCTgcgtcacagacccgctgggacccaagccccactggaaaatc
tggCCCAAATCTCGTTCCCGGTActaaaaataccccaaaatttcAGGCCC
ACtgtgaaattgactttgatttcatccccattcaaatttcattgtaaaaa
attgcactccaaaaccaccccCATTGGATTtttaagcttggaacaataga
atctctatccccattggaaaattttacccccgatgtggaaaaagtttcac
ccgaactatgagacaggggtgtcataatctctctgtaattcaaacGAATT
TCACTTTCCGTTGGacttcgaattagcgagattTAACTGTTCAATTTTAG
GACTGATATATCCAAGCTTTTCCAATATAGAGTGTTATTTTTATAAAACG
TTTTAGGACATTAATCGGACGTCATTTATACAACATATAGTTCACATTCT
TCCCTGGAAACagaagaaattttttccaaagtgtTTTTAAATGTTTGACG
GAAAATTCCGTCCAAGATTTGCGCCAAATATcttaactaaaatttacttg
tttttgtttcataatCAGACGATTTATATTCTTTatctttctccttttta
ttaGACTATCGATCAAGTTTACATTTTGGtaagttttctaataaagtcAC
TCTTACTTTTCTGTgattaaattaattttaaaaaacatttttattttccg
aGTGAAATACGAAGCTTTTTGGTAAGAGAAACTTAAATTATTAATTATCA
GAATCGTATTTTTCGGTGACTGTTCACTAATTCCATCAAACATCGAATAT
AGAATTTATATTAACGAAGTAGGCTGAAAATGGGCAAAATGGACCCGCTT
AGGAGGGTTATAACTTTTGCTCAAAGATAAATATAAAAGATCTGATATTA
TACTTGAAATCAGCTAGGTTCAAACTTTCAGAAAAggataaattcaaaat
ttggtGGATTACGAGAAAAGTCATCTTTTTTTAatgttcatttttcatct
tcatgtAATAAGTTCTTAATATCATCCGCTCTTAAGATTATTATTTCAAC
GATAGGTATTACTTTTAATTATACTTATTCTCCTTCCTTCACGTGAAAAA
TGTACGGACTGCCAAAAAGAATGTACTTTACAAATTGACTGTGACGCTTT
TTTGGGGAAACTTTTAAAGgaatttttatatttaattCATATTCTTTTAT
CTCCCATTTTTAGAATCCAACTGGGTCACGTGTCATGCAATGGACCAATC
ATACTCTTGATGGGGGTAAATTGACTTAGTTGAATTTTCCGGTTATCAAT
AGTTTAAATGTTCAATACAACCTTTTTAAacacaattattttttttataa
gaacaagttaatttTTGATGAGGCTCGACTGCTCTTATGATTTAGGCACT
TTgaacttcaaatttttcttactcTATAATCTTAGGACAAAATTTAAGTT
CTTCTTCACACCtttaaattgattgaaatgACAATTGCAGGCTcagaatt
gttcttaaattgttcttattttttgacgattttgagcctcgttgttctta
tcaattctttcttataaaacaacGATTTTTTTCTTTAGGAATGTCAAGTT
TCGAAATGGCGCTATCCATCAAACCAGTCCTTGGTACATGGAAGATTGTT
GCCAAATCTGAAGTAGGTTTCTTATTTTATTGATAGAATAATTTCTNATT
GTTGCCAAATCTGAAGTAGGTTTCTTATTTTATTGATAGGATAATTTCTG
ATTCTGATTTTCTTgatcaacttttgaaaaaatcttagCTTGATAGTCAT
CAAGTACATTCAAGTTAACACTCTTTTTTACTACCATgtagaaaccactc
tcaagggatCAAGTCTTATTGCACTTACCATGGTTTCCACATAATAACAA
GAAAAGAAGGAATATTGATTctaattttccgatttttcccACTTTTTTTT
AGAAACTAAAAGCAGAAGTCAGTATTAAAGTTGAGAAATATGGTAAGTCG
AAATTTCTAAGCTATTATACTGTGTGTCCTGATGAAAAAAGTTGAATCGA
ATTTATATAAACACACCCCCTTTTCTTACGGACCCGGGGGGATTtaatca
gccagtgggggtaacaATAACGGACccaaactcgatggggattgatagtC
ACATGTTTctaatggctggggatttgaattccattgttttctggtcaaaa
aattcagtgtggatggaaaaaatagtacaatattttgcagtggggatttg
ctcatctgattattttcagcgggacaaaaattagagtataattttccact
gaggacgatatttttgccaatttttccagtgggaaggggttcccagtggg
tctgtgagaagggggtttaTAAACAAAAATCCTCATAATCTATACACATT
TTTATGACCTGATCActaatttttggtaattttttagatttttgtatcAT
TTATTGATTTCCCTTTTAGTCTTACCAAAATTCAAAGTGGACATTACGAC
ACCTTCGTATATTATGGATGATGATACTACCATCACCACCAAAATCTGTG
GAAAGTACGTTAATTTCATACCGCCATATACCTCCCGCCCTTATTAcagc
tttcgtttttaaatatGAGTGATATCGTTCGCTTAACTCgtcattttaat
ttacaagctttttgagaTNGTTAATTTCATACCGCCATACCTCCCGCCCT
TATTACAGGTTTCGTTTTTAAATCTGAGTGATACCGTTCGcttaactcgt
caattttaatttacaagctttttgagattgaattgacacggatgtggagc
aaggttggtcagaaagaggaagagaaaaatattttttgcttatatcaaca
TGTGATATTCATTCGAATTTTTCTTATAGATATACGTATGGTAAAGAAGT
CTCTGGAAAGTTGGAAGCATCACTTTGCTTGAAACCAAATTCTTATTTAC
TAAGAATAAGATCAGATGATAAGAAAACATTCTGCATCAACATTAACAAA
AAGGTAAAGACAACACCTATGATCAACCTATAGACGATCCTATCGATttt
atcactaaaaaagggaacagtttaggagaggcgtgataaattcgggtgga
gtaagcagtggtgGTGATGTTTACAGTGTACAGTGTTCCAAAAACtttac
cgccacttttttcccgtaaaccgccctgacgccctaactctttcccgcgt
ttactggcCTCTAAACGGACGAAATAATCGTCTATTATCAACCTTAATGA
GGGGGTAAAGCTCTAGTTAAGCGCTGTTTGCATGTCAGTacaacaaatga
cgtcattcgaCACTTTCAATCTTGAATCTAGTACCCTATTTCTACCTCAT
TTACATTTGGAGAGTAAAAATTTAGAGAGTAAGGAATTTTGGCATGCGAG
AATAAAATTGTAATGTTGTTTTCAATGATTTTCCAAAACCTTTTCAGGAT
GAAAAATTAAACAGTGTGTAAGTCTTTTCAGACGAGGATGGCTATTTGTT
AAATATTTCTTGTTTTTCAATCTTTAGATTAAAGGATGTGAAAACATTGA
ATTCCCCTTGAAGAAGATGATGAACAAACCTAAACGGCTTCGTTATTCAG
ACTCCTACAGTAAATATTCCCTCAAAGTCATTGCAAATCTAACTGAGGAG
GGAACAGCTATCAAGCAAACTGAGGAACACCAATCAAAACACTTCTCGAG
ACAACCTTAcgaaatcaaatttgaaattccaaaatattttaaacctgGAA
TGATTTTCCCAGTCAAGGTAAGTTTCTTTAACATTTCATAAGAAGTGAGT
AAAAATGTCTTAACTTTGCTTGTTGAGTATTATAGGATAGGTTACTTTCC
GAAACTaagcaaaaacaacaaaaagtcaaaagcAGTCTCTCTAAAAAGCG
GGTTTTTTAAATTAGCAAGTCAAGAACGACTAATGCAATTGAAGAAGTTG
TTTAAAAAGGGATCTTTCTAAAGGCCACCTTTTCAACAGTTTAGTCTCTC
AAGAGGTAACATGTTCAGCAGTTGACCATGCCCAGCATACCATCCCACCG
TCGCGTGTACCAAATTTACTGTATTGAAATTCACTATATTGAAATTTACT
TATTCAATCAATTTTAAGATGTTGGTCAACACACCAGATGGTCGACCAAA
ACAAACACCAACCAAAGTCTGGCTAACCATTTCTCCGACTCCCGGCCGCC
GGCAAAAACGTTTAGTCACTGTTATAAATGGTTATGATGAATTCAATGTC
TTCCCCAGAGCTGATTCaaccaaatatattttcaatgCGGAAGGTGTTCT
TCCAACCAAGAAGTCAGaagttatcaaaaagaaaaaggta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004645XLOC_004645Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008253-exon-sc0000084-1491911889:91510..91602TCONS_00008253-exon-sc0000084-1491911889:91510..91602Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:91510..91602TCONS_00008253-exon-sc0000084-1510915933:91510..91602Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:91510..91602TCONS_00008253-exon-sc0000084-1575043694:91510..91602Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:94625..94729TCONS_00008253-exon-sc0000084-1491911889:94625..94729Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:94625..94729TCONS_00008253-exon-sc0000084-1510915933:94625..94729Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:94625..94729TCONS_00008253-exon-sc0000084-1575043694:94625..94729Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:95544..95804TCONS_00008253-exon-sc0000084-1491911889:95544..95804Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:95544..95804TCONS_00008253-exon-sc0000084-1510915933:95544..95804Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:95544..95804TCONS_00008253-exon-sc0000084-1575043694:95544..95804Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:96610..96752TCONS_00008253-exon-sc0000084-1491911889:96610..96752Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:96610..96752TCONS_00008253-exon-sc0000084-1510915933:96610..96752Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:96610..96752TCONS_00008253-exon-sc0000084-1575043694:96610..96752Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:97631..97680TCONS_00008253-exon-sc0000084-1491911889:97631..97680Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:97631..97680TCONS_00008253-exon-sc0000084-1510915933:97631..97680Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:97631..97680TCONS_00008253-exon-sc0000084-1575043694:97631..97680Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:98464..98487TCONS_00008253-exon-sc0000084-1491911889:98464..98487Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:98464..98487TCONS_00008253-exon-sc0000084-1510915933:98464..98487Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:98464..98487TCONS_00008253-exon-sc0000084-1575043694:98464..98487Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:99073..99124TCONS_00008253-exon-sc0000084-1491911889:99073..99124Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:99073..99124TCONS_00008253-exon-sc0000084-1510915933:99073..99124Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:99073..99124TCONS_00008253-exon-sc0000084-1575043694:99073..99124Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:99448..99521TCONS_00008253-exon-sc0000084-1491911889:99448..99521Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:99448..99521TCONS_00008253-exon-sc0000084-1510915933:99448..99521Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:99448..99521TCONS_00008253-exon-sc0000084-1575043694:99448..99521Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:99812..99851TCONS_00008253-exon-sc0000084-1491911889:99812..99851Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:99812..99851TCONS_00008253-exon-sc0000084-1510915933:99812..99851Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:99812..99851TCONS_00008253-exon-sc0000084-1575043694:99812..99851Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:100329..100413TCONS_00008253-exon-sc0000084-1491911889:100329..100413Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:100329..100413TCONS_00008253-exon-sc0000084-1510915933:100329..100413Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:100329..100413TCONS_00008253-exon-sc0000084-1575043694:100329..100413Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:100739..100862TCONS_00008253-exon-sc0000084-1491911889:100739..100862Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:100739..100862TCONS_00008253-exon-sc0000084-1510915933:100739..100862Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:100739..100862TCONS_00008253-exon-sc0000084-1575043694:100739..100862Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:101387..101626TCONS_00008253-exon-sc0000084-1491911889:101387..101626Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:101387..101626TCONS_00008253-exon-sc0000084-1510915933:101387..101626Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:101387..101626TCONS_00008253-exon-sc0000084-1575043694:101387..101626Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1491911889:101978..102199TCONS_00008253-exon-sc0000084-1491911889:101978..102199Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1510915933:101978..102199TCONS_00008253-exon-sc0000084-1510915933:101978..102199Clytia hemisphaericaexon
TCONS_00008253-exon-sc0000084-1575043694:101978..102199TCONS_00008253-exon-sc0000084-1575043694:101978..102199Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:91510..102199 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.11904	4.04686	0.758599	1.31619	247.842	149.881	23.8125	35.3499	0.925479	2.08458	2.9058	1.34851	2.47841	2.6443	3.03856	4.09869	1.80847	1.48053	5.18593	10.6947	7.07506	6.09335	4.91176	5.72196	103.902	123.36	0	1.70331	15.4955	7.63002
Blast
[Close]
BLAST of TCONS_00008253 vs. Swiss-Prot (Human)
Match: A2MG (Alpha-2-macroglobulin OS=Homo sapiens GN=A2M PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.488e-34
Identity = 92/271 (33.95%), Postives = 142/271 (52.40%), Query Frame = 2 
Query:  536 VKSLKDRLFIQTDKPIYKPGGKVRFRLVSVNKNLKPNSETIDQVYILNPTGSRVMQWTNHTLDGGMSSFEMALSIKPVLGTWKIVA-KSEKLKAEVSIKVEKYVLPKFKVDITTPSYXXXXXXXXXXXXCGKYTYGKEVSGKLEASLCLKPNSYLLRIRSDDKKTFCININKKIKGCENIEFPLKKMMNKPKRLRYSDSYSKYSLKVIANLTEEGTAIKQTEEHQSKHFSRQPYEIKF-EIPKYFKPGMIFPVKMLVNTPDGRPKQTPTKV 1342
            VK+    +F+QTDK IYKPG  V+FR+VS+++N  P +E I  VYI +P G+R+ QW +  L+GG+  F   LS +P  G++K+V  K    + E    VE++VLPKF+V +T P  I   +  +   +CG YTYGK V G +  S+C K  S       +D + FC   + ++         +K  + + KR  Y     +  L   A + EEGT ++ T   QS   +R   ++ F ++  +F+ G+  P    V   DG+    P KV
Sbjct:  122 VKNEDSLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRK-YSDASDCHGEDSQAFCEKFSGQLNSHGCFYQQVKTKVFQLKRKEY-----EMKLHTEAQIQEEGTVVELTGR-QSSEITRTITKLSFVKVDSHFRQGI--PFFGQVRLVDGKGVPIPNKV 383
The following BLAST results are available for this feature:
BLAST of TCONS_00008253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
A2MG3.488e-3433.95Alpha-2-macroglobulin OS=Homo sapiens GN=A2M PE=1 ... [more]
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