XLOC_004645 (gene) - C. hemisphaerica

Overview
NameXLOC_004645
Unique NameXLOC_004645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000084:91510..102199+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004645 ID=XLOC_004645|Name=XLOC_004645|organism=Clytia hemisphaerica|type=gene|length=10690bp|location=Sequence derived from alignment at sc0000084:91510..102199+ (Clytia hemisphaerica)
TGAAAGTCGAAGTTGGTTATAGAGTATTATCATTCTTCAATGTTATACCT TAGGTGTTTAGAGGAGTGTGGGgaacgaaaatgaaaatattaggTTGGTG CAATATTGGATAGATAGAgagttgaattgaattgaattgaattgaatata ttttcgctgcaacacagcaggataaccccttacaaaaaaaaatagatttc tctaatacaatggggaacctagaagaNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNttttgattgacttcaaaattccTGGCGTTATcca tggttttgtttttgatctaACTTGACGTTTGGTAAGTTTGACTGTGGGTA GATGTCTCTCTACAAGTACTTTAATTTTgtcattaaaaatattgaaacag gaGTCTGGATTAGTTATCGAGAAGAATAGAGTCTGCTACACTTGATACAT TTTACAAATCTATTTTGCAGGCATTTGCATTTTTTAGAGCCtccttttga gaaattttgaatctgttctttactttttgaattttatgcctaaaagtttt cttaaatgttcttactttcaccattttgtgagtatttctcTGTAATCTCT TAAGACACTGGATGATTTAGAGTCTGTAAAGCCTTATAATGGTTAATGTA CTTCTGTATTTGAtatatcgaagccttatgctcttatatattTGTGTGTA CAAATAGATATTTAGACTttgaacaaaagaaacaaagatgGCACTGCAGC CGCGAACGGCTTTCATATCTGCACTGgtgatattttttgttgttggaGCT CAAGCACGCATCAAAATCCGGTAAGTACATATTATTCTGTCGGAAATATC AGAATTTATATTTGATATttcaatgtatagcaatgtgccctcccataata gctttatggcaactcctaaacttgggcacaggatgtacggttacacattt tgtggattgcattgtggagtcacaagagtgctcaaactgcgagcagcgag caatgcataatgcaaatagtgagcgtcttaaatgaagactctccacccaa tccaagagtgctcaaactacAAAAGCAGTGAGCCAATATTTGATATTTCA GCgatgtttaaattttcaaaaactataaaaaatctgTGATCGAGTagtga aaatttcgaaatacgTTTTAAGGATAAGTCAATCCACTCAAAAGTTAGCT TTCACGTACTTCTATTAATGATGCATTTTTCTACcaaaggcaattttttt aaacatattaCCAAACTGTTTGGAACGAACATTACAAGTACGAACCCGGG GGGGGTGCTACCTATGCCGACCGAGGGGGTGTGTtgctgaagttcgaaaa atgaaccctacgtgggactcgtatttttgaaaaaagtgaccctgaatggg actgaaattcaaaagttttctcaaaattttccctattttttccaatttcc ccCAAAAAGGTTCCACACGAGGGACCGATTCTTCTATTTTGGTGCTTTTG CGACCGTACGAGGGGCTGAAGTATACCCTGGCCAGCGTCAGATCCCCGTA CTGCTTTTTGCCCATGTACCCCTCCCCCGGGAGTAAGAACCCCTCTTAGT TCGATCTATTGTTTAGAACCAAATTATATTTCAGCAAAATCAAATTACCT CCTCTACCCAAGAAGCCAGTTTACTTGGTGACCATACCACGAGTGGTATT CCCTGGTGAAATTACCACAGCCACTTTCAGTATCCCACCTTTGAAGAAAG GTTTCACACTAACTGTTCGTCTGAACCATCGAGAATCGATCGATATCAGT CAAGAGGTTGTGACGGAAGTCATGGCTCGTGATCGCAGACAATTGATTAC GATCCCGATTAGAGTAGATGAAAGGAAATTTGGATCAGAAAAAAGGTTTG TCAAAACgtttaatgttttttcataTATAGTTTAGCAAGCACTAATTTAG ACATAGAAGAAAATagagcaaaaagtaatggagggaacaattttagttat acaaactaaatccagtaacaataatcgtattatcatataacgcctatact actgtattacacgcattataaacgactccagtcgtATATGAAATAGACTG TATTATTAAAAAAGTTGCTTCGTCTTAAATCAGTGTCAGCTCTCTTTCTG TACTCGTGAATTTtaaggccaaaatatttttataagcttACTTTCTTCAA TGTATATTGACCTGAAGAGCTTAAAATCAGCATTTTCTTCAATTGTTCTT TATTCACCCCTACAAAGcttggtcgaaatatattgagatttaacgttttt cagaatttagagTCTTGGAGAGAATTTCAAATTTAGTACTTACACTTTAT TTTATTGaacatttcgattttggaggggttcgatggcttctaggctatat ttccaGCCTTATTGGAGCAATTTGAGCTTTTGAGTGAAGGATCCAAGTCT TCAGTCTCTATTTTTCAACCGTACTTTAACGCGCTTAAAAttatttgtgg tgtttaaaattttgcagggaaatctcctttgtctcaaatattttgtccaa gaTTGCAGGTATTGGCCTAAATTGTAACAAGTTTTAAGCTATTCATAAAT TGTTTTCGTAAAGCGTCATTTTACGCTTTTATTAATTTCTTTAGAGTAAA ACCTAGACTTATCTGGTATTTTATCTGGTTTCTCTATCATTCATTCCAAG GATTGTTTTCAAATTCTCAACCGACTCAGCCGAGACAGACGAAATGCCCT TTACAGCGAAACCACTTAATTTGGAAGTCAAATCGCTAAAAGATCGGTTA TTCATACAAACCGATAAACCGATTTATAAACCCGGTGGAAAAGGTATAGT TTCTTAATTCATAATTATCTAAACATAAAGCAAGTCCTGCATGCGTCTGC ACAGTCCCGTACAATCCATAGTTTACCTATACCAGACCCGGCAGAAACGG GAAGACTGGGGAGACTCAAGCCTCCCcatttttgagcaaatgagtttttt ttctcgaattcttagggaattttatctcattttgagccttcagcctcctc ACTTGTtgttccaccgggtctgtatACCCAAAGGTGGGGAAGGACACCTT CACTTACCCTTGACAACTGTTTGACGAGAGACATCAGGTACCCTTGCCAA ATCATTGGTAAGACTTCAAAATACTGTGATAACTGAAGTCTGATATACTG ATACCATAACTGAAGGCTCTACAGCGTGTCCTGGAATCGTCCTACGTCAG AACACGACTAacaaagtaattgaaactttagagcaatccagggagaaaga gtggtgccATCCCCTATCTTTGGTTAGATAGCTATTGAaagagccttcgg gtcgcctccgattgcggttgcagacttacttacttaaacaCTTAACACTT CTTACGATGCAACAAAAACACAATTCACTTATAAAcctaataaaaatttt aattgtgtAATAAAACATCTTAAAGGAATTTCTCATATCAGACAAAGAAA AACGACATTAAATAAAACACACAAAttctaatttttgacataccacAAAA GCCTTTCTATACTTGAAGTCTGTTCTAACACAGGAGTTTTctgggacacc ctgtacattcTCCGTAGTGTAAAAGTAAAGTTCAACCTTCGGGTTGGTGG AGCTATCGACAGAGGAGCCTTCGGATCGCttgtgttgattttttttcatt taactcattttttatttacagTTCGATTTCGGTTGGTCAGTGTAAACAAG AACTTGAAACCAAATAGTGAGGTATAATTTTTGAATAATCTTAACAATAG AGCTGCCTGGTGCAGCAAATGTCGTAGAATAAATTTATTGCAGTAGACTC TTGCTAAATCGAATttccattattcgaatctttctacaaATTGAACCTCA GTCCCTGGACAATCTTCGTAAAATGCTTTCTGAAGCTCTAATCCTCATAA TACACCCCTgcgtcacagacccgctgggacccaagccccactggaaaatc tggCCCAAATCTCGTTCCCGGTActaaaaataccccaaaatttcAGGCCC ACtgtgaaattgactttgatttcatccccattcaaatttcattgtaaaaa attgcactccaaaaccaccccCATTGGATTtttaagcttggaacaataga atctctatccccattggaaaattttacccccgatgtggaaaaagtttcac ccgaactatgagacaggggtgtcataatctctctgtaattcaaacGAATT TCACTTTCCGTTGGacttcgaattagcgagattTAACTGTTCAATTTTAG GACTGATATATCCAAGCTTTTCCAATATAGAGTGTTATTTTTATAAAACG TTTTAGGACATTAATCGGACGTCATTTATACAACATATAGTTCACATTCT TCCCTGGAAACagaagaaattttttccaaagtgtTTTTAAATGTTTGACG GAAAATTCCGTCCAAGATTTGCGCCAAATATcttaactaaaatttacttg tttttgtttcataatCAGACGATTTATATTCTTTatctttctccttttta ttaGACTATCGATCAAGTTTACATTTTGGtaagttttctaataaagtcAC TCTTACTTTTCTGTgattaaattaattttaaaaaacatttttattttccg aGTGAAATACGAAGCTTTTTGGTAAGAGAAACTTAAATTATTAATTATCA GAATCGTATTTTTCGGTGACTGTTCACTAATTCCATCAAACATCGAATAT AGAATTTATATTAACGAAGTAGGCTGAAAATGGGCAAAATGGACCCGCTT AGGAGGGTTATAACTTTTGCTCAAAGATAAATATAAAAGATCTGATATTA TACTTGAAATCAGCTAGGTTCAAACTTTCAGAAAAggataaattcaaaat ttggtGGATTACGAGAAAAGTCATCTTTTTTTAatgttcatttttcatct tcatgtAATAAGTTCTTAATATCATCCGCTCTTAAGATTATTATTTCAAC GATAGGTATTACTTTTAATTATACTTATTCTCCTTCCTTCACGTGAAAAA TGTACGGACTGCCAAAAAGAATGTACTTTACAAATTGACTGTGACGCTTT TTTGGGGAAACTTTTAAAGgaatttttatatttaattCATATTCTTTTAT CTCCCATTTTTAGAATCCAACTGGGTCACGTGTCATGCAATGGACCAATC ATACTCTTGATGGGGGTAAATTGACTTAGTTGAATTTTCCGGTTATCAAT AGTTTAAATGTTCAATACAACCTTTTTAAacacaattattttttttataa gaacaagttaatttTTGATGAGGCTCGACTGCTCTTATGATTTAGGCACT TTgaacttcaaatttttcttactcTATAATCTTAGGACAAAATTTAAGTT CTTCTTCACACCtttaaattgattgaaatgACAATTGCAGGCTcagaatt gttcttaaattgttcttattttttgacgattttgagcctcgttgttctta tcaattctttcttataaaacaacGATTTTTTTCTTTAGGAATGTCAAGTT TCGAAATGGCGCTATCCATCAAACCAGTCCTTGGTACATGGAAGATTGTT GCCAAATCTGAAGTAGGTTTCTTATTTTATTGATAGAATAATTTCTNATT GTTGCCAAATCTGAAGTAGGTTTCTTATTTTATTGATAGGATAATTTCTG ATTCTGATTTTCTTgatcaacttttgaaaaaatcttagCTTGATAGTCAT CAAGTACATTCAAGTTAACACTCTTTTTTACTACCATgtagaaaccactc tcaagggatCAAGTCTTATTGCACTTACCATGGTTTCCACATAATAACAA GAAAAGAAGGAATATTGATTctaattttccgatttttcccACTTTTTTTT AGAAACTAAAAGCAGAAGTCAGTATTAAAGTTGAGAAATATGGTAAGTCG AAATTTCTAAGCTATTATACTGTGTGTCCTGATGAAAAAAGTTGAATCGA ATTTATATAAACACACCCCCTTTTCTTACGGACCCGGGGGGATTtaatca gccagtgggggtaacaATAACGGACccaaactcgatggggattgatagtC ACATGTTTctaatggctggggatttgaattccattgttttctggtcaaaa aattcagtgtggatggaaaaaatagtacaatattttgcagtggggatttg ctcatctgattattttcagcgggacaaaaattagagtataattttccact gaggacgatatttttgccaatttttccagtgggaaggggttcccagtggg tctgtgagaagggggtttaTAAACAAAAATCCTCATAATCTATACACATT TTTATGACCTGATCActaatttttggtaattttttagatttttgtatcAT TTATTGATTTCCCTTTTAGTCTTACCAAAATTCAAAGTGGACATTACGAC ACCTTCGTATATTATGGATGATGATACTACCATCACCACCAAAATCTGTG GAAAGTACGTTAATTTCATACCGCCATATACCTCCCGCCCTTATTAcagc tttcgtttttaaatatGAGTGATATCGTTCGCTTAACTCgtcattttaat ttacaagctttttgagaTNGTTAATTTCATACCGCCATACCTCCCGCCCT TATTACAGGTTTCGTTTTTAAATCTGAGTGATACCGTTCGcttaactcgt caattttaatttacaagctttttgagattgaattgacacggatgtggagc aaggttggtcagaaagaggaagagaaaaatattttttgcttatatcaaca TGTGATATTCATTCGAATTTTTCTTATAGATATACGTATGGTAAAGAAGT CTCTGGAAAGTTGGAAGCATCACTTTGCTTGAAACCAAATTCTTATTTAC TAAGAATAAGATCAGATGATAAGAAAACATTCTGCATCAACATTAACAAA AAGGTAAAGACAACACCTATGATCAACCTATAGACGATCCTATCGATttt atcactaaaaaagggaacagtttaggagaggcgtgataaattcgggtgga gtaagcagtggtgGTGATGTTTACAGTGTACAGTGTTCCAAAAACtttac cgccacttttttcccgtaaaccgccctgacgccctaactctttcccgcgt ttactggcCTCTAAACGGACGAAATAATCGTCTATTATCAACCTTAATGA GGGGGTAAAGCTCTAGTTAAGCGCTGTTTGCATGTCAGTacaacaaatga cgtcattcgaCACTTTCAATCTTGAATCTAGTACCCTATTTCTACCTCAT TTACATTTGGAGAGTAAAAATTTAGAGAGTAAGGAATTTTGGCATGCGAG AATAAAATTGTAATGTTGTTTTCAATGATTTTCCAAAACCTTTTCAGGAT GAAAAATTAAACAGTGTGTAAGTCTTTTCAGACGAGGATGGCTATTTGTT AAATATTTCTTGTTTTTCAATCTTTAGATTAAAGGATGTGAAAACATTGA ATTCCCCTTGAAGAAGATGATGAACAAACCTAAACGGCTTCGTTATTCAG ACTCCTACAGTAAATATTCCCTCAAAGTCATTGCAAATCTAACTGAGGAG GGAACAGCTATCAAGCAAACTGAGGAACACCAATCAAAACACTTCTCGAG ACAACCTTAcgaaatcaaatttgaaattccaaaatattttaaacctgGAA TGATTTTCCCAGTCAAGGTAAGTTTCTTTAACATTTCATAAGAAGTGAGT AAAAATGTCTTAACTTTGCTTGTTGAGTATTATAGGATAGGTTACTTTCC GAAACTaagcaaaaacaacaaaaagtcaaaagcAGTCTCTCTAAAAAGCG GGTTTTTTAAATTAGCAAGTCAAGAACGACTAATGCAATTGAAGAAGTTG TTTAAAAAGGGATCTTTCTAAAGGCCACCTTTTCAACAGTTTAGTCTCTC AAGAGGTAACATGTTCAGCAGTTGACCATGCCCAGCATACCATCCCACCG TCGCGTGTACCAAATTTACTGTATTGAAATTCACTATATTGAAATTTACT TATTCAATCAATTTTAAGATGTTGGTCAACACACCAGATGGTCGACCAAA ACAAACACCAACCAAAGTCTGGCTAACCATTTCTCCGACTCCCGGCCGCC GGCAAAAACGTTTAGTCACTGTTATAAATGGTTATGATGAATTCAATGTC TTCCCCAGAGCTGATTCaaccaaatatattttcaatgCGGAAGGTGTTCT TCCAACCAAGAAGTCAGaagttatcaaaaagaaaaaggta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008253TCONS_00008253Clytia hemisphaericatranscript
TCONS_00008254TCONS_00008254Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008254-proteinTCONS_00008254-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:91510..102199 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.07 26.58 10.15 7.74 248.03 153.46 38.24 48.03 22.48 52.17 40.8 17.41 35.67 41.94 23.98 49.59 12.19 15 69.15 104.86 68.5 82.84 37.83 51.03 103.9 123.36 11.09 11.28 71.04 76.63