TCONS_00008474 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008474
Unique NameTCONS_00008474
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3907

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008474 ID=TCONS_00008474|Name=TCONS_00008474|organism=Clytia hemisphaerica|type=transcript|length=3907bp
CTTTGTCATAACATTGAAAGAGTTATGAACTGTTTTATTGAGAGAGActg
ttttttatgattttaaaatAGTTTACTAACTGGTTCATTCATAAAAAACT
CTAATAGGTATTTATTGATGAGTAGGTTTGGGGTTTGGCTTGGTGATAAT
ACTTTTAGATTACCAAATACCTTTAATATTAATGTATGTCTGTATATGAA
CAGATAAGCTGACTAACAGTTCATCAAATTTATCTTCTCTTTATGTAGAA
TTTATATGATAATTAGACaaaagacatgatattttgataCTTGAAAGATC
ATCCCTGATAATGTCAAACAAGAAACAGCACATCAAGCAAGGCTACCTTC
TTAAATGTcctcaaaaagccttaaatcctTTTAAACACAAGTGGCAATCC
AGATGGTTCATCTTACATGGCAATAGTGAACAAGGTCGGGTCAGGTTGGA
ATATTATGACAATGAGAAATGCCATCAACAAGAAAAAGGCAAACGTGTCA
TTCCACTCAGCCATTGTGTCAGTATAAAGCCGGTATGGAATAAAGATAAC
CNACGTGTCATTCCACTCAGCCATTGTGTCAGTATAAAGCCGGTATGGAA
CAAAGATAACCACCATGTCATAGAGATTGTAATCCAAGATAAAACATTTC
ACCTTGCTGCAGGCAACAAGGACGAAGAAAAAGCATGGTTCAAAGACCTT
TGCAAAGCAGTTTTTGGAAATGCAAACAGAAATAGCATTGTTCAGgtGCT
TGATAAGCCTTCAGAATTTGACTTTGGTTATCACAGTTTGGATAGAACTT
CTTTGGATGGTAATACTGATTCCCCAAGAACACTGCACACTGTTGAAGAA
AGTTTAAATGAAAGTCGTGATGACTGCAGTAGAGATGATACACAAAGTTT
GGAACGAGTTACAGGTGCAATGAACGATAGTACAAGTGTAGATGGGAGTC
ACGGATCATCAGAATATCTCATGAAACATGCAAACTCCTCATCTGTAGCA
TCTGAATTATCAAGTCTTGTCTCTTTTGAGTCTGGATTTGATGATGGTTC
AAGTGTCGCATCCACTGTCACTGAAGCATCCAGCTTTCCAGTTACAGTTC
GAGCTACAATTGCGTCTCAAAGATCTGGGATGAGTGGAACTTATCTGCTT
CAAGTCAATCCTCTCAATATTGTATTAATCGATGTGCCAACACAAAAACC
TGTTTGTGAATGGCCAATACAATATTTGCGCAGATATGGTCGCGGCAGAA
CAAAGTTTTCGTTTGAGGCTAGTGATAAATGTAAATTTGGAAAAGGTGTT
TATACTTTCAATACATTAGAAGGCGATTCGATTTTCCATCTTGTTGATAT
GCATGCACGTGGTATCTCTATGAGAAATCaaatgcttcgaaaaagaaCTT
CAATGCCAGAAGGTTTCAAACCACTTGGAAATACTAGTAAAAGACTTCAC
CATTCTGAAGGAAAGCTTGTTGATAAATTTTCATCAGATATACCTCCTAT
ACCAAATAGTGCACGATTAGCGGATAGTGTTACAGACatgaatgaaattt
tattaatCGGTCCTGGAGATTCTGTCAGTCAAATAGGAACTTTACGAAGT
CAGCGCTCTGATATTGAGAAATTACGAATCGATATCGAAGGGGATCACAG
TAGATTGGATTCTCGAGGACCCAGTATTGGAAGTGGAATCAGTCTcgaaa
ttgctcaaaatatttcacaaagtggAGAAGAGCTTAAATGTATTGatgaa
aacaaagcaaacacTTCGAGTGCATTCGAGTCAACATTCACTGAGGATCC
TAGAACTTTAAATACAAAACCTGTTTCTCCTATACAAGAAGAAACGATCG
CACAAACTCTAGAAAACGAGTCTTTGGCAAAACCAAAGGTAAAAAGTATA
ATAGATCAGAATGGACCAAATCGTACTTCAACACCTGATGATAGTACCTC
GAACACTAGTATAATAAAGAAACCAAAAATCTCTATTAAAAGAAGCAGTT
CATTGAAATTACCGAGTGCTTTGAAGCGTAGTAACTCTTCTGGGAAAGAC
AATAGCGTGAAGAAAAGTAGCTCCGTTAAAAGGAGTAGTTCTTTTAGAAG
TCGTTTCTTCAAATCTAAAAGCTCTTCAGATGACGAAAAGAAGtcagaaa
agaaaatgaaaccgAAATCAAAAAGCGCACAAGATCTTTCGTTGGAGCCT
ATAGTGACTGTTGTACCAACTCCTACAACCACTATCGAAGCATTGGATCA
ACAAATCGCCCAGGaacaaaaagcaaaagaaattcttgcCAAAGCTATCG
AAGATGATATGAACAGAAATTCTGAGAATGAAATTTTAGACCCTGACATG
AAAcgtgaaaagaaaagaagacgTTTCCCTATTCGACATAAAAGTAATGA
AATGGTCGAGAATGCCACTCCTGAAAAGTCCAGATTGAATCGCCTTTCGA
ATTCCTTTGCTGGGTATGATTATAAAGGGCATGTTGTTTTGCAGAAAAGA
AACAGTGGCGAAAAAGAAATCGatgATGAAGAGTATCAAAACCTTCAAAA
GCGAACACAATCAGTCATGAAGAAAGTGGAGCTTTACGAAAGCTTAAAAC
GTCAAGCTGAGGATAATCGCAACAATACCAGCTACACGCTATGGAGAAAA
CGTCAAAGTTTGAAAGAAACCCCCAAATCTAAAGATATCACCGAGTAGGA
TCGTCAAATTCTAAGAAAGTTTATGAGTAATGTTAATCATGCTCTTGGAT
CAAATTTTCTACTAAGATCTGTTCATCCACATttattatggaaataaaat
ggaAAAGTTCGTGTTTTTTAATGTGATTAAGATTTACGGAAATTATAGCT
TTCTTTAACAGTATATTCACTGTTTTATATCCTGTATCTCGAGTAGTGTA
GGATAAATTTTATGATCAATTTCTCTCATGTGGTCATCCTAACGTGTTGT
TGCCCCATCTTAgcaaaaactgtcaaaaacGTTCAAGTAGGTGTCAAAAA
GGACGACAGGCCTCTTCAAGAAGATGTTATCCTCTCTTCGAAAgctcttt
tgttaaaaacaaACCTCTCTATTAGCTTCTTTATCTATTATCAAAATCTT
AGACCCTACAAAAGTTTTAGGTTTCATATTTTTacattctaaattttttt
tccaagttcTAAGTCATAATTACATGACGACAAACTTGTTTTATTTCCAT
TTTTAGATAGATATAATTATTTACTAGAGATATTATTACATAAATTATac
agaaaaaaaacgtgtttaaCATTTTTTGTCCTTGGAAAATTAACATCTAT
TCATGTACACCGGGTGTCTATGATTTGTTTGCACCATCATGCTGttaaaa
attgttaatttttcaaaactacgACGTGTTCATTCATCCTCTTCGCATCA
GAATTTGTAATGATACTATTCGATGTCAAAtttactttttagaaataaat
tatttttaggGAGTTATATTAAGTATTTGAAGTCACTAGTGCTCTATTTT
CATTCTCTTCCAGACATTTTTCATACAAACtttcttgcttttacacatAT
ATCAAAAGATGTGAATACATATTTCATCATGGCGACTTTTCTTTTTACGA
CACAATCAAGAAATAGAGAAATCTTGCACACTCTTAATATAGAGTGTCAA
TCTTTTTGAGAAGCTATTACACATAGGTTTCAAGTACAAGCTTATCTTAT
TTTGCCATATTTTCATTCGTTTCTTTAAGATTATTTTCAGAAGGTGGTTT
TCATTAGTCTTAGGGTCTTTCCTCTCCTTTACAACCTTCTAGTAATATTT
GACCATAACAGTcgagtatttttttaaagaattttttgattAGAGTATAT
GATTTTCTTACTAATTTATCATTTTAAGTTAATAAATTTGTGATTTGACT
ctaaatt
Run BLAST on NCBI

protein sequence of TCONS_00008474-protein

>TCONS_00008474-protein ID=TCONS_00008474-protein|Name=TCONS_00008474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=795bp
MSNKKQHIKQGYLLKCPQKALNPFKHKWQSRWFILHGNSEQGRVRLEYYD
NEKCHQQEKGKRVIPLSHCVSIKPVWNKDNXRVIPLSHCVSIKPVWNKDN
HHVIEIVIQDKTFHLAAGNKDEEKAWFKDLCKAVFGNANRNSIVQVLDKP
SEFDFGYHSLDRTSLDGNTDSPRTLHTVEESLNESRDDCSRDDTQSLERV
TGAMNDSTSVDGSHGSSEYLMKHANSSSVASELSSLVSFESGFDDGSSVA
STVTEASSFPVTVRATIASQRSGMSGTYLLQVNPLNIVLIDVPTQKPVCE
WPIQYLRRYGRGRTKFSFEASDKCKFGKGVYTFNTLEGDSIFHLVDMHAR
GISMRNQMLRKRTSMPEGFKPLGNTSKRLHHSEGKLVDKFSSDIPPIPNS
ARLADSVTDMNEILLIGPGDSVSQIGTLRSQRSDIEKLRIDIEGDHSRLD
SRGPSIGSGISLEIAQNISQSGEELKCIDENKANTSSAFESTFTEDPRTL
NTKPVSPIQEETIAQTLENESLAKPKVKSIIDQNGPNRTSTPDDSTSNTS
IIKKPKISIKRSSSLKLPSALKRSNSSGKDNSVKKSSSVKRSSSFRSRFF
KSKSSSDDEKKSEKKMKPKSKSAQDLSLEPIVTVVPTPTTTIEALDQQIA
QEQKAKEILAKAIEDDMNRNSENEILDPDMKREKKRRRFPIRHKSNEMVE
NATPEKSRLNRLSNSFAGYDYKGHVVLQKRNSGEKEIDDEEYQNLQKRTQ
SVMKKVELYESLKRQAEDNRNNTSYTLWRKRQSLKETPKSKDITE
Run BLAST on NCBI

transcript from alignment at sc0000085:381812..389430-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008474 ID=TCONS_00008474|Name=TCONS_00008474|organism=Clytia hemisphaerica|type=transcript|length=7619bp|location=Sequence derived from alignment at sc0000085:381812..389430- (Clytia hemisphaerica)
CTTTGTCATAACATTGAAAGAGTTATGAACTGTTTTATTGAGAGAGACTG TTTTTTATGATTTTAAAATAGTTTACTAACTGGTTCATTCATAAAAAACT CTAATAGGTATTTATTGATGAGTAGGTTTGGGGTTTGGCTTGGTGATAAT ACTTTTAGATTACCAAATACCTTTAATATTAATGTATGTCTGTATATGAA CAGATAAGCTGACTAACAGTTCATCAAATTTATCTTCTCTTTATGTAGAA TTTATATGATAATTAGACAAAAGACATGATATTTTGATACTTGAAAGATC ATCCCTGATAATGTCAAACAAGAAACAGCACATCAAGCAAGGCTACCTTC TTAAATGTCCTCAAAAAGCCTTAAATCCTTTTAAAGTAAGTATATTTATA TATATAAATTACAATACCTTGTGCTTGTTACTTAGTTTTTTCTTTTGTTG AACTTTTGTTAAACCCCCTAAGAAATTTGTCAGTTGTCAAATTGTAGCTA TAACAGGCTAGCTCTAAAACAGCATCTAGTAAGTGGAAATACAGGCCAGA TATCAACAGTCCCATGTTTTGACCAATCGTCCCAAGAGCAGTTGATGGTA CTGTATACTGTAATTTGGTCTAATATTGACATCCCTCTTCTAATTTCAAC AGCCTTCTTCAGAGATAGGAATAGTACTGAATAATAGGAAGGTCAGAATC ACTGGTAAGACTCAAACATCAAAGAATTTTCTCCTCTCTGATCGCTAAGT AAAGAAAATTAGTTTCAATCAGCAATTCTGACCTTGCTGTTATTCCTATC TCTAAAGAAAGGTGTCGAAAATAGACATTACACTAACTTACAGTAAAGTA AAAACGCAGAAAGAAAGGTGACACACTTTCATGGCTCCGACTGGGTTTCT AGGTCCCCCTGCCAAATTTAGCTCCCCCCCTGAGAACAAGGTCCCCCCAG TCTGATAAAATTTTAGGTCCCAGTATAGGGGAAAAATTGTATGGCATTCA CAAGCTCTATTTACATGTGTGTGCACTTTTAGAGAATGCAATAGAATGTC TTCATTTTTGCATTTTAAGGATCAGATCACACTTTGCATGAAAACATAAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCCCCCCCCCCCAAAATAGAGCTCCCCCCGTCGGTTGGGAAAA ACAACCAGCTCCCACCTCTTATATGGCAAATTTTAGGTGTAGCTCCCCCC GCTCTGGCAGGGGGGGGTGCTGCGAGCCATGGACTTTTGATCAGAAATTT TCATGTAAAATAGGGGGTAGCAAGGAAAGGGGATAGCTTAAGAAGAAGGG GCTTACATATGTATTATAGATTATTTTCAAGCACCGTTATGAAATTTGGT CTCAAGAAAGGAAGTTCTCTGTTAGAGTAGTCTGGAGTAGTCTGAGTCAA ATAGAAGAAAGAAATTCATTATTTGGCTTTCTCTCTCTAAAGATATTTCA CATATATTTGTTAGCTATTTTTGTCCAAAATCCTTTCGGGATAGGATTTC TAAAGGTTAGGGGGATGCCAAGAAGGGTTGATCCCTTTCCGCACTATGAA CATCACTTTTATCAGAGCTTCAGTATGAAGTTTTAAGCGTTTTTAAAGAA AGCAAATAAGCCAGAGATTGAGATCTTTAGTTTTTCTCAATCTTTTCTCT ATCGACACTTTTTGAACTGGGGGTACCTGGACTTAGGCCCCTTTTGAATT AAGGTTGCAACTTTTTTTTTAAACATTATGTAGATGTGGTACTGTCTCCA TAGAGGGATTGTTGGTATCATCCCTAAGGAGATTCTATATAGGTCAATTT TTAAAAAGTCAATAAAGATATCAGGGTTTTAAAGGAACATAATATACCAG TGAAAATAATTCATCATTTAGAAATGGGAAATCTTTTATACTAAGAAGAT AGCAAAATGTGTAATAATTGATTTACTTTGTGAGTTAGTGGCAATTTATC TTTAATTTTCTCTTGATTGATTACTTCCTTTGATCATCAAATTAATGCTA ATTACTTTTGCACATTAAAAATGTCAAATATTGTTGTTAGATAATATTTT ATATCAGGCTTATATATTATCTAGCTTAGATCAGTTAGGTTAATTTTCAC NAACATTGGGTAATATTTTATATCAGGCTTATATATTATCTGGCTTAGAT CAGTTAGGTTAATTTTTATTGGTGGTTTTGGAATAATTTTTTCTTCCATT TAGCACAAGTGGCAATCCAGATGGTTCATCTTACATGGCAATAGTGAACA AGGTCGGGTCAGGTTGGAATATTATGACAATGAGAAATGCCATCAACAAG AAAAAGGCAAACGTGTCATTCCACTCAGCCATTGTGTCAGTATAAAGCCG GTATGGAATAAAGATAACCNACGTGTCATTCCACTCAGCCATTGTGTCAG TATAAAGCCGGTATGGAACAAAGATAACCACCATGTCATAGAGATTGTAA TCCAAGATAAAACATTTCACCTTGCTGCAGGCAACAAGGACGAAGAAAAA GCATGGTTCAAAGACCTTTGCAAAGCAGTTTTTGGAAATGCAAACAGAAA TAGCATTGTTCAGGTATGTGATGTAATTTGTATCCCATTTTACAATGGGT GAAATTCTAAAGATTGACTATACAAGTGGACCTTTAAATCCAGAATCTTT GACCATTTGAAAACTTCTCTCTCTCTAGATCCTTGTGTTTAACTTAAAGT TTCATATTTATTTCAAAAGTAACAAAAATAACATCTGGGATGTCTTGGTT CTACAGCCTACGCTTGATAGAAGTTTACACATTAAATCACTTACAAGATT GATGTGGCACTTCTACCTTTCTGGTTCTCACGAAGGGGCAAGATCCACAT GAGTGTCACGGTACAAATCTTTTATTTTTGATAATATCTGATAAGAGCAC TATTTCTAATATTTTATTTATTTTCAGGTGCTTGATAAGCCTTCAGAATT TGACTTTGGTTATCACAGTTTGGATAGAACTTCTTTGGATGGTAATACTG ATTCCCCAAGAACACTGCACACTGTTGAAGAAAGTTTAAATGAAAGTCGT GATGACTGCAGTAGAGATGATACACAAAGTTTGGAACGAGTTACAGGTAT TATTTTCAAATATTATTAATCAATTAATATTAAGTTTGATGTAAAAATAT ATTTGAAAGGTCATTATGGTAAACAGAAAACTGTCTTGACCATGGAGCTC TAAATTGTATTAAAAGCATCCAAATATGTAATCGAAAACCAATTTATCCT AATTGAATTTAAGACAAAAAGTTTTAGGACTGCATTAAGGCTGGACTTAA AAAATTGTTGGTTTGCCGTCACCCAGCCAACCAACCCTACCTCGAAACCT GCCGACCCAAAAAAATTTATTGCTATTCTAAAGAAGATTTTTTTTCTTTC AAAAACTTCAAATAATAAAAAATCAAAATTTGTATATCTTGTTTGTCTCA TCGTAAATTCCCTGCTAGCACTTCTGTTTTTTATTCAAAATTACCTAAAT GTAAACAAACTGTTAACCCTTCCATGGACAAAAATTTCATAAATCGCTAA AATAAAAAAAATTCGACCGACCGACCTCGAAAATCTAGGGTCAGGTGACG GCAAACCAACAATTTTTTAAGCCCAGCCTAATAAGCTAAGAATAAGTTTT GATTTTCCTTCAGGTGCAATGAACGATAGTACAAGTGTAGATGGGAGTCA CGGATCATCAGAATATCTCATGAAACATGCAAACTCCTCATCTGTAGCAT CTGAATTATCAAGTCTTGTCTCTTTTGAGTCTGGATTTGATGATGGTTCA AGTGTCGCATCCACTGTCACTGAAGGTAAGTTATACATTAATATGTTTTG ATAAATTGGTTGATGTTTTGCACCCTGTATCTGAAACTCTTTGCTATGAT AAAATATTTCCCATTTATTATATTTCTCCATTGTCTTTTGATCGTTCATC TTATCTTTCCTGTATTACTGTGTGTCTTGTTTTCCCTATTTTACAAGTTT TAGCTTTTTTATTATAACTAAATTTGACAGGGAGTTTTTTCTAATGGTAT CTTCAAATTATACTTTAGCATCCAGCTTTCCAGTTACAGTTCGAGCTACA ATTGCGTCTCAAAGATCTGGGATGAGTGGAACTTATCTGCTTCAAGTCAA TCCTCTCAATATTGTATTAATCGATGTGCCAACACAAAAACCTGTTTGTG AATGGCCAATACAATATTTGCGCAGATATGGTCGCGGCAGAACAAAGTTT TCGTTTGAGGCTAGTGATAAATGTAAATTTGGAAAAGGTGTTTATACTTT CAATACATTAGAAGGCGATTCGATTTTCCATCTTGTTGATATGCATGCAC GTGGTATCTCTATGAGAAATCAAATGCTTCGAAAAAGAACTTCAATGCCA GAAGGTTTCAAACCACTTGGAAATACTAGTAAAAGACTTCACCATTCTGA AGGAAAGCTTGTTGATAAATTTTCATCAGATATACCTCCTATACCAAATA GTGCACGATTAGCGGATAGTGTTACAGACATGAATGAAATTTTATTAATC GGTCCTGGAGATTCTGTCAGTCAAATAGGAACTTTACGAAGTCAGCGCTC TGATATTGAGAAATTACGAATCGATATCGAAGGGGATCACAGTAGATTGG ATTCTCGAGGACCCAGTATTGGAAGTGGAATCAGTCTCGAAATTGCTCAA AATATTTCACAAAGTGGAGAAGAGCTTAAATGTATTGATGAAAACAAAGC AAACACTTCGAGTGCATTCGAGTCAACATTCACTGAGGATCCTAGAACTT TAAATACAAAACCTGTTTCTCCTATACAAGAAGAAACGATCGCACAAACT CTAGAAAACGAGTCTTTGGCAAAACCAAAGGTAAAAAGTATAATAGATCA GAATGGACCAAATCGTACTTCAACACCTGATGATAGTACCTCGAACACTA GTATAATAAAGAAACCAAAAATCTCTATTAAAAGAAGCAGTTCATTGAAA TTACCGAGTGCTTTGAAGCGTAGTAACTCTTCTGGGAAAGACAATAGCGT GAAGAAAAGTAGCTCCGTTAAAAGGAGTAGTTCTTTTAGAAGTCGTTTCT TCAAATCTAAAAGCTCTTCAGATGACGAAAAGAAGTCAGAAAAGAAAATG AAACCGAAATCAAAAAGCGCACAAGATCTTTCGTTGGAGCCTATAGTGAC TGTTGTACCAACTCCTACAACCACTATCGAAGCATTGGATCAACAAATCG CCCAGGAACAAAAAGCAAAAGAAATTCTTGCCAAAGCTATCGAAGATGAT ATGAACAGAAATTCTGAGAATGAAATTTTAGACCCTGACATGAAACGTGA AAAGAAAAGAAGACGTTTCCCTATTCGACATAAAAGTAATGAAATGGTCG AGAATGCCACTCCTGAAAAGTCCAGATTGAATCGCCTTTCGAATTCCTTT GCTGGGTATGATTATAAAGGGCATGTTGTTTTGCAGAAAAGAAACAGTGG CGAAAAAGAAATCGATGGTAAGTTTTTTTTCTTCAGATTTTTCAAATTGT ACTCCATAATCAATAGCTAATCAGTCGGTCATTTTGGAAAGATTTGTTTG ATTTCTAAACAAGATTTGCTTTCTTTTATCTTTGCTGAATCAACACAGAA CTTGTAAATGTTTGCTCAAAGATAAGACGTTTGTTTTGAAAGTCAACAGA AAATTGACGCGCCAAAGCTTTAAAGTACGTCTTGAACAAAAGCAGTCCTG TTGTGTGTAATGCGAGATCAATATTATTGTCTGATTTCTATGCAACAACC CTTTTCTTTTCTGGACAAGATAGACAATTCCGTAAGATTCCTTACTTTGT TCCTTCACAAAGTAAGCCTTATCAAAACATTGAATTTCTAAAATCTCTTA ATCTAGATGCTTAACGTGATATAGTGTAAATGGATGAGTTTGTTTTTGTC TGACCCCTGATTCAATTAAGTTTTTTTTAAAGCCTTTCATTCAAATTGAC GACAATAGTAGTTTATGATTTCCATTATTTTGTTCAGATGAAGAGTATCA AAACCTTCAAAAGCGAACACAATCAGTCATGAAGAAAGTGGAGCTTTACG AAAGCTTAAAACGTCAAGCTGAGGATAATCGCAACAATACCAGCTACACG CTATGGAGAAAACGTCAAAGTTTGAAAGAAACCCCCAAATCTAAAGATAT CACCGAGTAGGATCGTCAAATTCTAAGAAAGTTTATGAGTAATGTTAATC ATGCTCTTGGATCAAATTTTCTACTAAGATCTGTTCATCCACATTTATTA TGGAAATAAAATGGAAAAGTTCGTGTTTTTTAATGTGATTAAGATTTACG GAAATTATAGCTTTCTTTAACAGTATATTCACTGTTTTATATCCTGTATC TCGAGTAGTGTAGGATAAATTTTATGATCAATTTCTCTCATGTGGTCATC CTAACGTGTTGTTGCCCCATCTTAGCAAAAACTGTCAAAAACGTTCAAGT AGGTGTCAAAAAGGACGACAGGCCTCTTCAAGAAGATGTTATCCTCTCTT CGAAAGCTCTTTTGTTAAAAACAAACCTCTCTATTAGCTTCTTTATCTAT TATCAAAATCTTAGACCCTACAAAAGTTTTAGGTTTCATATTTTTACATT CTAAATTTTTTTTCCAAGTTCTAAGTCATAATTACATGACGACAAACTTG TTTTATTTCCATTTTTAGATAGATATAATTATTTACTAGAGATATTATTA CATAAATTATACAGAAAAAAAACGTGTTTAACATTTTTTGTCCTTGGAAA ATTAACATCTATTCATGTACACCGGGTGTCTATGATTTGTTTGCACCATC ATGCTGTTAAAAATTGTTAATTTTTCAAAACTACGACGTGTTCATTCATC CTCTTCGCATCAGAATTTGTAATGATACTATTCGATGTCAAATTTACTTT TTAGAAATAAATTATTTTTAGGGAGTTATATTAAGTATTTGAAGTCACTA GTGCTCTATTTTCATTCTCTTCCAGACATTTTTCATACAAACTTTCTTGC TTTTACACATATATCAAAAGATGTGAATACATATTTCATCATGGCGACTT TTCTTTTTACGACACAATCAAGAAATAGAGAAATCTTGCACACTCTTAAT ATAGAGTGTCAATCTTTTTGAGAAGCTATTACACATAGGTTTCAAGTACA AGCTTATCTTATTTTGCCATATTTTCATTCGTTTCTTTAAGATTATTTTC AGAAGGTGGTTTTCATTAGTCTTAGGGTCTTTCCTCTCCTTTACAACCTT CTAGTAATATTTGACCATAACAGTCGAGTATTTTTTTAAAGAATTTTTTG ATTAGAGTATATGATTTTCTTACTAATTTATCATTTTAAGTTAATAAATT TGTGATTTGACTCTAAATT

Coding sequence (CDS) from alignment at sc0000085:381812..389430-

>TCONS_00008474 ID=TCONS_00008474|Name=TCONS_00008474|organism=Clytia hemisphaerica|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000085:381812..389430- (Clytia hemisphaerica)
ATGTCAAACAAGAAACAGCACATCAAGCAAGGCTACCTTCTTAAATGTCC
TCAAAAAGCCTTAAATCCTTTTAAACACAAGTGGCAATCCAGATGGTTCA
TCTTACATGGCAATAGTGAACAAGGTCGGGTCAGGTTGGAATATTATGAC
AATGAGAAATGCCATCAACAAGAAAAAGGCAAACGTGTCATTCCACTCAG
CCATTGTGTCAGTATAAAGCCGGTATGGAATAAAGATAACCNACGTGTCA
TTCCACTCAGCCATTGTGTCAGTATAAAGCCGGTATGGAACAAAGATAAC
CACCATGTCATAGAGATTGTAATCCAAGATAAAACATTTCACCTTGCTGC
AGGCAACAAGGACGAAGAAAAAGCATGGTTCAAAGACCTTTGCAAAGCAG
TTTTTGGAAATGCAAACAGAAATAGCATTGTTCAGGTGCTTGATAAGCCT
TCAGAATTTGACTTTGGTTATCACAGTTTGGATAGAACTTCTTTGGATGG
TAATACTGATTCCCCAAGAACACTGCACACTGTTGAAGAAAGTTTAAATG
AAAGTCGTGATGACTGCAGTAGAGATGATACACAAAGTTTGGAACGAGTT
ACAGGTGCAATGAACGATAGTACAAGTGTAGATGGGAGTCACGGATCATC
AGAATATCTCATGAAACATGCAAACTCCTCATCTGTAGCATCTGAATTAT
CAAGTCTTGTCTCTTTTGAGTCTGGATTTGATGATGGTTCAAGTGTCGCA
TCCACTGTCACTGAAGCATCCAGCTTTCCAGTTACAGTTCGAGCTACAAT
TGCGTCTCAAAGATCTGGGATGAGTGGAACTTATCTGCTTCAAGTCAATC
CTCTCAATATTGTATTAATCGATGTGCCAACACAAAAACCTGTTTGTGAA
TGGCCAATACAATATTTGCGCAGATATGGTCGCGGCAGAACAAAGTTTTC
GTTTGAGGCTAGTGATAAATGTAAATTTGGAAAAGGTGTTTATACTTTCA
ATACATTAGAAGGCGATTCGATTTTCCATCTTGTTGATATGCATGCACGT
GGTATCTCTATGAGAAATCAAATGCTTCGAAAAAGAACTTCAATGCCAGA
AGGTTTCAAACCACTTGGAAATACTAGTAAAAGACTTCACCATTCTGAAG
GAAAGCTTGTTGATAAATTTTCATCAGATATACCTCCTATACCAAATAGT
GCACGATTAGCGGATAGTGTTACAGACATGAATGAAATTTTATTAATCGG
TCCTGGAGATTCTGTCAGTCAAATAGGAACTTTACGAAGTCAGCGCTCTG
ATATTGAGAAATTACGAATCGATATCGAAGGGGATCACAGTAGATTGGAT
TCTCGAGGACCCAGTATTGGAAGTGGAATCAGTCTCGAAATTGCTCAAAA
TATTTCACAAAGTGGAGAAGAGCTTAAATGTATTGATGAAAACAAAGCAA
ACACTTCGAGTGCATTCGAGTCAACATTCACTGAGGATCCTAGAACTTTA
AATACAAAACCTGTTTCTCCTATACAAGAAGAAACGATCGCACAAACTCT
AGAAAACGAGTCTTTGGCAAAACCAAAGGTAAAAAGTATAATAGATCAGA
ATGGACCAAATCGTACTTCAACACCTGATGATAGTACCTCGAACACTAGT
ATAATAAAGAAACCAAAAATCTCTATTAAAAGAAGCAGTTCATTGAAATT
ACCGAGTGCTTTGAAGCGTAGTAACTCTTCTGGGAAAGACAATAGCGTGA
AGAAAAGTAGCTCCGTTAAAAGGAGTAGTTCTTTTAGAAGTCGTTTCTTC
AAATCTAAAAGCTCTTCAGATGACGAAAAGAAGTCAGAAAAGAAAATGAA
ACCGAAATCAAAAAGCGCACAAGATCTTTCGTTGGAGCCTATAGTGACTG
TTGTACCAACTCCTACAACCACTATCGAAGCATTGGATCAACAAATCGCC
CAGGAACAAAAAGCAAAAGAAATTCTTGCCAAAGCTATCGAAGATGATAT
GAACAGAAATTCTGAGAATGAAATTTTAGACCCTGACATGAAACGTGAAA
AGAAAAGAAGACGTTTCCCTATTCGACATAAAAGTAATGAAATGGTCGAG
AATGCCACTCCTGAAAAGTCCAGATTGAATCGCCTTTCGAATTCCTTTGC
TGGGTATGATTATAAAGGGCATGTTGTTTTGCAGAAAAGAAACAGTGGCG
AAAAAGAAATCGATGATGAAGAGTATCAAAACCTTCAAAAGCGAACACAA
TCAGTCATGAAGAAAGTGGAGCTTTACGAAAGCTTAAAACGTCAAGCTGA
GGATAATCGCAACAATACCAGCTACACGCTATGGAGAAAACGTCAAAGTT
TGAAAGAAACCCCCAAATCTAAAGATATCACCGAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004732XLOC_004732Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008474-proteinTCONS_00008474-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008474-exon-sc0000085-1575043694:389046..389430TCONS_00008474-exon-sc0000085-1575043694:389046..389430Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1575043694:386668..387027TCONS_00008474-exon-sc0000085-1575043694:386668..387027Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1575043694:386135..386303TCONS_00008474-exon-sc0000085-1575043694:386135..386303Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1575043694:385406..385567TCONS_00008474-exon-sc0000085-1575043694:385406..385567Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1575043694:383714..385162TCONS_00008474-exon-sc0000085-1575043694:383714..385162Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1575043694:381812..383193TCONS_00008474-exon-sc0000085-1575043694:381812..383193Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:389046..389430TCONS_00008474-exon-sc0000085-1510915933:389046..389430Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:386668..387027TCONS_00008474-exon-sc0000085-1510915933:386668..387027Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:386135..386303TCONS_00008474-exon-sc0000085-1510915933:386135..386303Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:385406..385567TCONS_00008474-exon-sc0000085-1510915933:385406..385567Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:383714..385162TCONS_00008474-exon-sc0000085-1510915933:383714..385162Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1510915933:381812..383193TCONS_00008474-exon-sc0000085-1510915933:381812..383193Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:389046..389430TCONS_00008474-exon-sc0000085-1491911889:389046..389430Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:386668..387027TCONS_00008474-exon-sc0000085-1491911889:386668..387027Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:386135..386303TCONS_00008474-exon-sc0000085-1491911889:386135..386303Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:385406..385567TCONS_00008474-exon-sc0000085-1491911889:385406..385567Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:383714..385162TCONS_00008474-exon-sc0000085-1491911889:383714..385162Clytia hemisphaericaexon
TCONS_00008474-exon-sc0000085-1491911889:381812..383193TCONS_00008474-exon-sc0000085-1491911889:381812..383193Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:381812..389430 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.8748 10.8824 5.94307 5.24198 60.5874 44.4316 29.59 30.2191 16.7627 21.1345 17.7726 18.6304 20.7435 13.8641 18.465 20.5765 13.3957 13.6728 18.1146 23.3917 9.03463 9.10763 25.9161 27.672 14.4927 15.6703 32.0471 27.6127 41.0948 38.7254
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002404IRS_PTB
IPR001849PH_domain
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005158insulin receptor binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005158 insulin receptor binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008474 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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