TCONS_00009081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009081
Unique NameTCONS_00009081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009081 ID=TCONS_00009081|Name=TCONS_00009081|organism=Clytia hemisphaerica|type=transcript|length=3135bp
TTTAGATATAAAGATTAAACAACATAAAGATGAACTATAAACGCCAACGT
TTGGAGCCTGTGACCAACTACAAATCATATATTGAAATATTAATACAAGA
AAATAAACTTAGTAGCAGCGCAGAATTTGACAGTCAAAATTTGGAGAATT
TGAACCTATATCCTCAGTTTATTATGATGCCCAATGTCTTATTTTGGGAT
CTTGAAACAAAATTAAAAGACATACNGGAGCCTGTGACCAACTACAAATC
ATATATTGAAATATTAATACAAGAAAATAAACTTAGTAGCAGCGCAGAAT
TTGACAGTCAAAATTTGGAGAATTTGAACCTATATCCTCAGTTCATTATG
ATGCCCAATGTCTTATTTTGGGATCTTGAAACAAAATTAAAAGACATACA
ACTCCTTCTACCATCTTGTCCGGAATGTGGTGGTGGTTTGAAAACATTGC
CTGTAGACAAAGGAGCAAATTATTTTATGAGACAACTGTATTGCGTGAGT
GAAATTAAATTATTAGTGTCAACGAAACTCTGTTGCTCTTATACAAAGAA
GCATCAGTTTGCTGGATATGATCCAAGGATATTGGAGAAAACTAATAATA
GTGGCATAGAAATACCTTTTAAATTGTTTCACCGTGCTGGAGTCACATTA
CAGTTATCCacttttatttttgagaatatttgCAATGGTTCTCATATCAA
GAAGCTACATGAATTGATATTGAAAAATTATGGTGAAAATCTTAATAAGA
AATCTGTAAActttggtttgaaattttcacgaGAAACTATTGAAATGGAG
CATATGATAGCTTTTCTATCTTCACAGAGGCTTTGCTTACCAAGCCCACC
TCTATTAACACAATGTTTTCTCTCTTATTACAATGAACTTGAATGTGGCA
TTAAAAAAACTTGTGAAAATATTGATGTTCCAGACggctttgtttacatt
gatgatTCCTTCGATATCAGAAAATCTTCAATTACCAATACTCTtgataa
aattgtttttgtttcaaatgaTAAAGGATTGGTGATGTTTTGGAAGTTGG
TTAAAGATAAAGATTGTTTTACAgaAGTTGTATCGTTCATTTCATCATAT
AATGAGATGCATCCGGATGCTAAGATCAAAGGCTGTTTTACTAGCAAATG
TTGTGAATGGAAACAAGATTTGATATCACATTTCAGTGAAGATTTTATTG
TCAGAGGAAATCTACCTCTGCTTATTGAGTGCTTGGAAGGTCGCTTGGAG
GAGGAAAATTCTAATTTAGATTTACTTGGACATtcacaaaaagaaaacag
atGCATAGCTTTCAAAGAAAATTGGAAAGAATTCGAAAATACCTTAGctc
aacaaaatttcaaagaagatACAGTAACAATTATTGATATAATAAAGTCT
CACTTTGATAAGGATTGCTTTCATGAAGTTGTTTATGATTTACATGATGC
CAAATATTTTCACCAGATAcattccaaattacaaaaatgGACAGGTAATT
TACATTTAGGTGTGCCAATGATCAATGCTATGGTTTCTGTCGGATTCCAT
CAAATGAACATCCAAAATGATGTCAAATTGTGTGAGCCAGAAACTAACTC
TACCAACAGTCCTTCTGAAGACTCAAATATAATTTCCCTTATTGACTCAA
TTTTAGCAAATTTTCATGATGGAATTTGCGAGGATAAAGCCGAGGTAGAC
AAAGAAATTATTAATTATATGATGTTTTTGAAATGCTTTAAATATGTGAG
CTACTGTGCCCCTGATATTGTTCAGTCACCACATCTATTACCTCATTTTG
TGTCATCAATACAACTTGTATCAATACCGTATTATTCAACTAATACTGAC
ACTACCAGTAGCCAATACTTGGACGATGTAGAGAAACTGAGATCACTGGT
AAACTGGTCAAATCAAAATTCCACAAATGAAAATACAGAATTTTTGACAT
GTTTTTTGAAACATGTAACCACATTGAACAATGCAGACTATACAACACAT
CTATCAGAACTGGAAACTAAGTTTGGCATTGACTTTGAtaatccaataga
acaaattgTTGAGAAAGTTGGCTTACTTTTACATTCAACCAAAGCTGATG
AACCATTCAGTGGAATAGCATTTGTTGAGAGTTTATCAAATCTGTTTTgt
gttgttttcttttttgttacCAGTATTAAACGATTTCCTCTTATACCTGT
TTACCCTAAGAAATGGGATTCCTTTTCACCATTTGTTTTGGTGTTGATTG
AGGAAGGACATGAGATAGTGATGCTTGATCCTTCATCTCTGGTCATCGCT
CCACAGTCAAATGATAAGGAAGAGGAGGAAAAAGTGAATTCTGAGAAACA
ATTTAATTGTAGATGTGGTCGTGGAATGGCGGAGAAAAAGTTAACATCAA
AATGTGTGACTATTGATGGTTCAAAATATCCAAGCAGATGTTTATGTTTT
AGAGCCGGTGAACCATGTTCAAATTTATGTGATTGCAAAGCCTGTGCCAA
TCCTCATGGCGTGAGGCTGACATCAAAACAACAGGAGGGCGTAGTAGACC
AAACTCGAATAATACGGAAAAGGAACAAACACGAAACACAAAAGTCTATT
AAGagaattcaaaatcaatttaaacaATTTCGTAAAACATATGGTGATAA
AGAGAAATGGACTTGGGCTGAATACATTCTTTTTGAATACGTATTGCATG
AACTGGCGTTAGACTATAACCAAGAGAAAAACGGTCCACTAGCATGGGCA
GATATATCTATTCTCATGGATAGATTTGTTGAGAAATATAAATCTTTTTG
TCACATGCTGAAAGTTTTTTCTCCACATTTGGAAAATCTACTTAAAGAGA
AGTCGAAGAAATCGTTAGAAAAACGCTATTTAGAACGACAAGAGTCAATC
TATACAACTGCGTGATCTGGCATGACTATTATCTAGTATTTTGTTTCACC
TAGGGAACTAACttcttgttaaaaaaattctcgaaatttctCGACAAAAT
TATTTCCCTTAAAAGGTAATTTCATTCTTTCAATGTTTTCAATAAATATA
TACAAATTATGGCATTTAATATATTATATAACTATTTATCgatcacaaaa
aaaaatcaataatgaCACTATGTAAAATCATAATG
Run BLAST on NCBI

protein sequence of TCONS_00009081-protein

>TCONS_00009081-protein ID=TCONS_00009081-protein|Name=TCONS_00009081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=961bp
MNYKRQRLEPVTNYKSYIEILIQENKLSSSAEFDSQNLENLNLYPQFIMM
PNVLFWDLETKLKDIXEPVTNYKSYIEILIQENKLSSSAEFDSQNLENLN
LYPQFIMMPNVLFWDLETKLKDIQLLLPSCPECGGGLKTLPVDKGANYFM
RQLYCVSEIKLLVSTKLCCSYTKKHQFAGYDPRILEKTNNSGIEIPFKLF
HRAGVTLQLSTFIFENICNGSHIKKLHELILKNYGENLNKKSVNFGLKFS
RETIEMEHMIAFLSSQRLCLPSPPLLTQCFLSYYNELECGIKKTCENIDV
PDGFVYIDDSFDIRKSSITNTLDKIVFVSNDKGLVMFWKLVKDKDCFTEV
VSFISSYNEMHPDAKIKGCFTSKCCEWKQDLISHFSEDFIVRGNLPLLIE
CLEGRLEEENSNLDLLGHSQKENRCIAFKENWKEFENTLAQQNFKEDTVT
IIDIIKSHFDKDCFHEVVYDLHDAKYFHQIHSKLQKWTGNLHLGVPMINA
MVSVGFHQMNIQNDVKLCEPETNSTNSPSEDSNIISLIDSILANFHDGIC
EDKAEVDKEIINYMMFLKCFKYVSYCAPDIVQSPHLLPHFVSSIQLVSIP
YYSTNTDTTSSQYLDDVEKLRSLVNWSNQNSTNENTEFLTCFLKHVTTLN
NADYTTHLSELETKFGIDFDNPIEQIVEKVGLLLHSTKADEPFSGIAFVE
SLSNLFCVVFFFVTSIKRFPLIPVYPKKWDSFSPFVLVLIEEGHEIVMLD
PSSLVIAPQSNDKEEEEKVNSEKQFNCRCGRGMAEKKLTSKCVTIDGSKY
PSRCLCFRAGEPCSNLCDCKACANPHGVRLTSKQQEGVVDQTRIIRKRNK
HETQKSIKRIQNQFKQFRKTYGDKEKWTWAEYILFEYVLHELALDYNQEK
NGPLAWADISILMDRFVEKYKSFCHMLKVFSPHLENLLKEKSKKSLEKRY
LERQESIYTTA
Run BLAST on NCBI

transcript from alignment at sc0000090:12779..16494+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009081 ID=TCONS_00009081|Name=TCONS_00009081|organism=Clytia hemisphaerica|type=transcript|length=3716bp|location=Sequence derived from alignment at sc0000090:12779..16494+ (Clytia hemisphaerica)
TTTAGATATAAAGATTAAACAACATAAAGATGAACTATAAACGCCAACGT TTGGAGCCTGTGACCAACTACAAATCATATATTGAAATATTAATACAAGA AAATAAACTTAGTAGCAGCGCAGAATTTGACAGTCAAAATTTGGAGAATT TGAACCTATATCCTCAGTTTATTATGATGCCCAATGTCTTATTTTGGGAT CTTGAAACAAAATTAAAAGACATACNGGAGCCTGTGACCAACTACAAATC ATATATTGAAATATTAATACAAGAAAATAAACTTAGTAGCAGCGCAGAAT TTGACAGTCAAAATTTGGAGAATTTGAACCTATATCCTCAGTTCATTATG ATGCCCAATGTCTTATTTTGGGATCTTGAAACAAAATTAAAAGACATACA ACTCCTTCTACCATCTTGTCCGGAATGTGGTGGTGGTTTGAAAACATTGC CTGTAGACAAAGGAGCAAATTATTTTATGAGACAACTGTATTGCGTGAGT GAAATTAAATTATTAGTGTCAACGAAACTCTGTTGCTCTTATACAAAGAA GCATCAGTTTGCTGGATATGATCCAAGGATATTGGAGAAAACTAATAATA GTGGCATAGAAATACCTTTTAAATTGTTTCACCGTGCTGGAGTCACATTA CAGTTATCCacttttatttttgagaatatttgCAATGGTTCTCATATCAA GAAGCTACATGAATTGATATTGAAAAATTATGGTGAAAATCTTAATAAGA AATCTGTAAActttggtttgaaattttcacgaGAAACTATTGAAATGGAG CATATGATAGCTTTTCTATCTTCACAGAGGCTTTGCTTACCAAGCCCACC TCTATTAACACAATGTTTTCTCTCTTATTACAATGAACTTGAATGTGGCA TTAAAAAAACTTGTGAAAATATTGATGTTCCAGACggctttgtttacatt gatgatTCCTTCGATATCAGAAAATCTTCAATTACCAATACTCTtgataa aattgtttttgtttcaaatgaTAAAGGATTGGTGATGTTTTGGAAGTTGG TTAAAGATAAAGATTGTTTTACAGTAAGGATAACAGTTAACTTCTTTTCA ATGTTAGGtatataccgtaagttggtctaatggtctaatccctcttctaa ttccgacacccttctttagagataggaataatatgaaggtcagaatcaca aatatagaaaaaacattttccttctctgattgctaagcaaagaaaattag tttcaatcagcaattctgaccttcctattattcctatctgcatagaaggg tgtcgaaattagaagagggaatggtgacattagaccaacttacggtatat aCTTTATGCAAGCGGGATGCAAGCAGATTTCCGTGACAACATTATGTGTG AGTCCATTGTTTTTATTAATAGATGGCGATAAAGCTTAAAAATTTAGtat ggatttttgaaatttcccccAGTCTACCAGGCTTAATGTTGTTCTTTTTT CTAACGAgaatgatattttttaatttcatcacGGATTATTTTTCAACTGA TACTCTAATAGGAATGTCCATAAGGTCAGTGCTAAAATCGATCAATGATC AAAAAATGATCTGAATTGACTGaattaatttttaaacaatttttattttt ctaggaAGTTGTATCGTTCATTTCATCATATAATGAGATGCATCCGGATG CTAAGATCAAAGGCTGTTTTACTAGCAAATGTTGTGAATGGAAACAAGAT TTGATATCACATTTCAGTGAAGATTTTATTGTCAGAGGAAATCTACCTCT GCTTATTGAGTGCTTGGAAGGTCGCTTGGAGGAGGAAAATTCTAATTTAG ATTTACTTGGACATtcacaaaaagaaaacagatGCATAGCTTTCAAAGAA AATTGGAAAGAATTCGAAAATACCTTAGctcaacaaaatttcaaagaaga tACAGTAACAATTATTGATATAATAAAGTCTCACTTTGATAAGGATTGCT TTCATGAAGTTGTTTATGATTTACATGATGCCAAATATTTTCACCAGATA cattccaaattacaaaaatgGACAGGTAATTTACATTTAGGTGTGCCAAT GATCAATGCTATGGTTTCTGTCGGATTCCATCAAATGAACATCCAAAATG ATGTCAAATTGTGTGAGCCAGAAACTAACTCTACCAACAGTCCTTCTGAA GACTCAAATATAATTTCCCTTATTGACTCAATTTTAGCAAATTTTCATGA TGGAATTTGCGAGGATAAAGCCGAGGTAGACAAAGAAATTATTAATTATA TGATGTTTTTGAAATGCTTTAAATATGTGAGCTACTGTGCCCCTGATATT GTTCAGTCACCACATCTATTACCTCATTTTGTGTCATCAATACAACTTGT ATCAATACCGTATTATTCAACTAATACTGACACTACCAGTAGCCAATACT TGGACGATGTAGAGAAACTGAGATCACTGGTAAACTGGTCAAATCAAAAT TCCACAAATGAAAATACAGAATTTTTGACATGTTTTTTGAAACATGTAAC CACATTGAACAATGCAGACTATACAACACATCTATCAGAACTGGAAACTA AGTTTGGCATTGACTTTGAtaatccaatagaacaaattgTTGAGAAAGTT GGCTTACTTTTACATTCAACCAAAGCTGATGAACCATTCAGTGGAATAGC ATTTGTTGAGAGTTTATCAAATCTGTTTTgtgttgttttcttttttgtta cCAGTATTAAACGATTTCCTCTTATACCTGTTTACCCTAAGAAATGGGAT TCCTTTTCACCATTTGTTTTGGTGTTGATTGAGGAAGGACATGAGATAGT GATGCTTGATCCTTCATCTCTGGTCATCGCTCCACAGTCAAATGATAAGG AAGAGGAGGAAAAAGTGAATTCTGAGAAACAATTTAATTGTAGATGTGGT CGTGGAATGGCGGAGAAAAAGTTAACATCAAAATGTGTGACTATTGATGG TTCAAAATATCCAAGCAGATGTTTATGTTTTAGAGCCGGTGAACCATGTT CAAATTTATGTGATTGCAAAGCCTGTGCCAATCCTCATGGCGTGAGGCTG ACATCAAAACAACAGGAGGGCGTAGTAGACCAAACTCGAATAATACGGAA AAGGAACAAACACGAAACACAAAAGTCTATTAAGagaattcaaaatcaat ttaaacaATTTCGTAAAACATATGGTGATAAAGAGAAATGGACTTGGGCT GAATACATTCTTTTTGAATACGTATTGCATGAACTGGCGTTAGACTATAA CCAAGAGAAAAACGGTCCACTAGCATGGGCAGATATATCTATTCTCATGG ATAGATTTGTTGAGAAATATAAATCTTTTTGTCACATGCTGAAAGTTTTT TCTCCACATTTGGAAAATCTACTTAAAGAGAAGTCGAAGAAATCGTTAGA AAAACGCTATTTAGAACGACAAGAGTCAATCTATACAACTGCGTGATCTG GCATGACTATTATCTAGTATTTTGTTTCACCTAGGGAACTAACttcttgt taaaaaaattctcgaaatttctCGACAAAATTATTTCCCTTAAAAGGTAA TTTCATTCTTTCAATGTTTTCAATAAATATATACAAATTATGGCATTTAA TATATTATATAACTATTTATCgatcacaaaaaaaaatcaataatgaCACT ATGTAAAATCATAATG

Coding sequence (CDS) from alignment at sc0000090:12779..16494+

>TCONS_00009081 ID=TCONS_00009081|Name=TCONS_00009081|organism=Clytia hemisphaerica|type=CDS|length=5772bp|location=Sequence derived from alignment at sc0000090:12779..16494+ (Clytia hemisphaerica)
ATGAACTATAAACGCCAACGTTTGGAGCCTGTGACCAACTACAAATCATA
TATTGAAATATTAATACAAGAAAATAAACTTAGTAGCAGCGCAGAATTTG
ACAGTCAAAATTTGGAGAATTTGAACCTATATCCTCAGTTTATTATGATG
CCCAATGTCTTATTTTGGGATCTTGAAACAAAATTAAAAGACATACNGGA
GCCTGTGACCAACTACAAATCATATATTGAAATATTAATACAAGAAAATA
AACTTAGTAGCAGCGCAGAATTTGACAGTCAAAATTTGGAGAATTTGAAC
CTATATCCTCAGTTCATTATGATGCCCAATGTCTTATTTTGGGATCTTGA
AACAAAATTAAAAGACATACAACTCCTTCTACCATCTTGTCCGGAATGTG
GTGGTGGTTTGAAAACATTGCCTGTAGACAAAGGAGCAAATTATTTTATG
AGACAACTGTATTGCGTGAGTGAAATTAAATTATTAGTGTCAACGAAACT
CTGTTGCTCTTATACAAAGAAGCATCAGTTTGCTGGATATGATCCAAGGA
TATTGGAGAAAACTAATAATAGTGGCATAGAAATACCTTTTAAATTGTTT
CACCGTGCTGGAGTCACATTACAGTTATCCacttttatttttgagaatat
ttgCAATGGTTCTCATATCAAGAAGCTACATGAATTGATATTGAAAAATT
ATGGTGAAAATCTTAATAAGAAATCTGTAAActttggtttgaaattttca
cgaGAAACTATTGAAATGGAGCATATGATAGCTTTTCTATCTTCACAGAG
GCTTTGCTTACCAAGCCCACCTCTATTAACACAATGTTTTCTCTCTTATT
ACAATGAACTTGAATGTGGCATTAAAAAAACTTGTGAAAATATTGATGTT
CCAGACggctttgtttacattgatgatTCCTTCGATATCAGAAAATCTTC
AATTACCAATACTCTtgataaaattgtttttgtttcaaatgaTAAAGGAT
TGGTGATGTTTTGGAAGTTGGTTAAAGATAAAGATTGTTTTACAgaAGTT
GTATCGTTCATTTCATCATATAATGAGATGCATCCGGATGCTAAGATCAA
AGGCTGTTTTACTAGCAAATGTTGTGAATGGAAACAAGATTTGATATCAC
ATTTCAGTGAAGATTTTATTGTCAGAGGAAATCTACCTCTGCTTATTGAG
TGCTTGGAAGGTCGCTTGGAGGAGGAAAATTCTAATTTAGATTTACTTGG
ACATtcacaaaaagaaaacagatGCATAGCTTTCAAAGAAAATTGGAAAG
AATTCGAAAATACCTTAGctcaacaaaatttcaaagaagatACAGTAACA
ATTATTGATATAATAAAGTCTCACTTTGATAAGGATTGCTTTCATGAAGT
TGTTTATGATTTACATGATGCCAAATATTTTCACCAGATAcattccaaat
tacaaaaatgGACAGGTAATTTACATTTAGGTGTGCCAATGATCAATGCT
ATGGTTTCTGTCGGATTCCATCAAATGAACATCCAAAATGATGTCAAATT
GTGTGAGCCAGAAACTAACTCTACCAACAGTCCTTCTGAAGACTCAAATA
TAATTTCCCTTATTGACTCAATTTTAGCAAATTTTCATGATGGAATTTGC
GAGGATAAAGCCGAGGTAGACAAAGAAATTATTAATTATATGATGTTTTT
GAAATGCTTTAAATATGTGAGCTACTGTGCCCCTGATATTGTTCAGTCAC
CACATCTATTACCTCATTTTGTGTCATCAATACAACTTGTATCAATACCG
TATTATTCAACTAATACTGACACTACCAGTAGCCAATACTTGGACGATGT
AGAGAAACTGAGATCACTGGTAAACTGGTCAAATCAAAATTCCACAAATG
AAAATACAGAATTTTTGACATGTTTTTTGAAACATGTAACCACATTGAAC
AATGCAGACTATACAACACATCTATCAGAACTGGAAACTAAGTTTGGCAT
TGACTTTGAtaatccaatagaacaaattgTTGAGAAAGTTGGCTTACTTT
TACATTCAACCAAAGCTGATGAACCATTCAGTGGAATAGCATTTGTTGAG
AGTTTATCAAATCTGTTTTgtgttgttttcttttttgttacCAGTATTAA
ACGATTTCCTCTTATACCTGTTTACCCTAAGAAATGGGATTCCTTTTCAC
CATTTGTTTTGGTGTTGATTGAGGAAGGACATGAGATAGTGATGCTTGAT
CCTTCATCTCTGGTCATCGCTCCACAGTCAAATGATAAGGAAGAGGAGGA
AAAAGTGAATTCTGAGAAACAATTTAATTGTAGATGTGGTCGTGGAATGG
CGGAGAAAAAGTTAACATCAAAATGTGTGACTATTGATGGTTCAAAATAT
CCAAGCAGATGTTTATGTTTTAGAGCCGGTGAACCATGTTCAAATTTATG
TGATTGCAAAGCCTGTGCCAATCCTCATGGCGTGAGGCTGACATCAAAAC
AACAGGAGGGCGTAGTAGACCAAACTCGAATAATACGGAAAAGGAACAAA
CACGAAACACAAAAGTCTATTAAGagaattcaaaatcaatttaaacaATT
TCGTAAAACATATGGTGATAAAGAGAAATGGACTTGGGCTGAATACATTC
TTTTTGAATACGTATTGCATGAACTGGCGTTAGACTATAACCAAGAGAAA
AACGGTCCACTAGCATGGGCAGATATATCTATTCTCATGGATAGATTTGT
TGAGAAATATAAATCTTTTTGTCACATGCTGAAAGTTTTTTCTCCACATT
TGGAAAATCTACTTAAAGAGAAGTCGAAGAAATCGTTAGAAAAACGCTAT
TTAGAACGACAAGAGTCAATCTATACAACTGCGTGAATGAACTATAAACG
CCAACGTTTGGAGCCTGTGACCAACTACAAATCATATATTGAAATATTAA
TACAAGAAAATAAACTTAGTAGCAGCGCAGAATTTGACAGTCAAAATTTG
GAGAATTTGAACCTATATCCTCAGTTTATTATGATGCCCAATGTCTTATT
TTGGGATCTTGAAACAAAATTAAAAGACATACNGGAGCCTGTGACCAACT
ACAAATCATATATTGAAATATTAATACAAGAAAATAAACTTAGTAGCAGC
GCAGAATTTGACAGTCAAAATTTGGAGAATTTGAACCTATATCCTCAGTT
CATTATGATGCCCAATGTCTTATTTTGGGATCTTGAAACAAAATTAAAAG
ACATACAACTCCTTCTACCATCTTGTCCGGAATGTGGTGGTGGTTTGAAA
ACATTGCCTGTAGACAAAGGAGCAAATTATTTTATGAGACAACTGTATTG
CGTGAGTGAAATTAAATTATTAGTGTCAACGAAACTCTGTTGCTCTTATA
CAAAGAAGCATCAGTTTGCTGGATATGATCCAAGGATATTGGAGAAAACT
AATAATAGTGGCATAGAAATACCTTTTAAATTGTTTCACCGTGCTGGAGT
CACATTACAGTTATCCacttttatttttgagaatatttgCAATGGTTCTC
ATATCAAGAAGCTACATGAATTGATATTGAAAAATTATGGTGAAAATCTT
AATAAGAAATCTGTAAActttggtttgaaattttcacgaGAAACTATTGA
AATGGAGCATATGATAGCTTTTCTATCTTCACAGAGGCTTTGCTTACCAA
GCCCACCTCTATTAACACAATGTTTTCTCTCTTATTACAATGAACTTGAA
TGTGGCATTAAAAAAACTTGTGAAAATATTGATGTTCCAGACggctttgt
ttacattgatgatTCCTTCGATATCAGAAAATCTTCAATTACCAATACTC
TtgataaaattgtttttgtttcaaatgaTAAAGGATTGGTGATGTTTTGG
AAGTTGGTTAAAGATAAAGATTGTTTTACAgaAGTTGTATCGTTCATTTC
ATCATATAATGAGATGCATCCGGATGCTAAGATCAAAGGCTGTTTTACTA
GCAAATGTTGTGAATGGAAACAAGATTTGATATCACATTTCAGTGAAGAT
TTTATTGTCAGAGGAAATCTACCTCTGCTTATTGAGTGCTTGGAAGGTCG
CTTGGAGGAGGAAAATTCTAATTTAGATTTACTTGGACATtcacaaaaag
aaaacagatGCATAGCTTTCAAAGAAAATTGGAAAGAATTCGAAAATACC
TTAGctcaacaaaatttcaaagaagatACAGTAACAATTATTGATATAAT
AAAGTCTCACTTTGATAAGGATTGCTTTCATGAAGTTGTTTATGATTTAC
ATGATGCCAAATATTTTCACCAGATAcattccaaattacaaaaatgGACA
GGTAATTTACATTTAGGTGTGCCAATGATCAATGCTATGGTTTCTGTCGG
ATTCCATCAAATGAACATCCAAAATGATGTCAAATTGTGTGAGCCAGAAA
CTAACTCTACCAACAGTCCTTCTGAAGACTCAAATATAATTTCCCTTATT
GACTCAATTTTAGCAAATTTTCATGATGGAATTTGCGAGGATAAAGCCGA
GGTAGACAAAGAAATTATTAATTATATGATGTTTTTGAAATGCTTTAAAT
ATGTGAGCTACTGTGCCCCTGATATTGTTCAGTCACCACATCTATTACCT
CATTTTGTGTCATCAATACAACTTGTATCAATACCGTATTATTCAACTAA
TACTGACACTACCAGTAGCCAATACTTGGACGATGTAGAGAAACTGAGAT
CACTGGTAAACTGGTCAAATCAAAATTCCACAAATGAAAATACAGAATTT
TTGACATGTTTTTTGAAACATGTAACCACATTGAACAATGCAGACTATAC
AACACATCTATCAGAACTGGAAACTAAGTTTGGCATTGACTTTGAtaatc
caatagaacaaattgTTGAGAAAGTTGGCTTACTTTTACATTCAACCAAA
GCTGATGAACCATTCAGTGGAATAGCATTTGTTGAGAGTTTATCAAATCT
GTTTTgtgttgttttcttttttgttacCAGTATTAAACGATTTCCTCTTA
TACCTGTTTACCCTAAGAAATGGGATTCCTTTTCACCATTTGTTTTGGTG
TTGATTGAGGAAGGACATGAGATAGTGATGCTTGATCCTTCATCTCTGGT
CATCGCTCCACAGTCAAATGATAAGGAAGAGGAGGAAAAAGTGAATTCTG
AGAAACAATTTAATTGTAGATGTGGTCGTGGAATGGCGGAGAAAAAGTTA
ACATCAAAATGTGTGACTATTGATGGTTCAAAATATCCAAGCAGATGTTT
ATGTTTTAGAGCCGGTGAACCATGTTCAAATTTATGTGATTGCAAAGCCT
GTGCCAATCCTCATGGCGTGAGGCTGACATCAAAACAACAGGAGGGCGTA
GTAGACCAAACTCGAATAATACGGAAAAGGAACAAACACGAAACACAAAA
GTCTATTAAGagaattcaaaatcaatttaaacaATTTCGTAAAACATATG
GTGATAAAGAGAAATGGACTTGGGCTGAATACATTCTTTTTGAATACGTA
TTGCATGAACTGGCGTTAGACTATAACCAAGAGAAAAACGGTCCACTAGC
ATGGGCAGATATATCTATTCTCATGGATAGATTTGTTGAGAAATATAAAT
CTTTTTGTCACATGCTGAAAGTTTTTTCTCCACATTTGGAAAATCTACTT
AAAGAGAAGTCGAAGAAATCGTTAGAAAAACGCTATTTAGAACGACAAGA
GTCAATCTATACAACTGCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005090XLOC_005090Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009081-proteinTCONS_00009081-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009081-exon-sc0000090-1491911889:12779..13851TCONS_00009081-exon-sc0000090-1491911889:12779..13851Clytia hemisphaericaexon
TCONS_00009081-exon-sc0000090-1510915933:12779..13851TCONS_00009081-exon-sc0000090-1510915933:12779..13851Clytia hemisphaericaexon
TCONS_00009081-exon-sc0000090-1575043694:12779..13851TCONS_00009081-exon-sc0000090-1575043694:12779..13851Clytia hemisphaericaexon
TCONS_00009081-exon-sc0000090-1491911889:14433..16494TCONS_00009081-exon-sc0000090-1491911889:14433..16494Clytia hemisphaericaexon
TCONS_00009081-exon-sc0000090-1510915933:14433..16494TCONS_00009081-exon-sc0000090-1510915933:14433..16494Clytia hemisphaericaexon
TCONS_00009081-exon-sc0000090-1575043694:14433..16494TCONS_00009081-exon-sc0000090-1575043694:14433..16494Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:12779..16494 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.31075 3.94914 1.37285 1.2894 1.25905 1.0466 1.21591 1.45939 0.796965 0.86061 0.786192 0.524887 0.677372 0.477346 1.15668 1.34473 1.59288 1.27813 0.644457 0.377652 0.844066 0.600404 11.7752 9.85857 1.28879 1.01079 0.648405 0.958148 5.30237 6.69115
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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