TCONS_00009435 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009435
Unique NameTCONS_00009435
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009435 ID=TCONS_00009435|Name=TCONS_00009435|organism=Clytia hemisphaerica|type=transcript|length=353bp
TATATATGAAACACGGGAAATTTTTAGAGAAACTCTGCCGCAAGAACTTT
TTGCTTTCTCTTTCCAAAAGAGAATCCCCCCAAAGAGGTacaagttttta
actttccacAGGCATTTCCGGAGTGCTCAGAGGCcactttcccgatcggg
aaacaGGTTAACTTCCCGATTTGGAAAGTCTAGCCATTTAGGGAAGTTtt
ccaccttcccgttcggggaatatttcccgttaaggcaatagttgcctttt
CCATATAGTGTTCCGACTGTAAAATAAGTACTCTTCAAAACcttctttgt
aatttttgaaatcaGCACACtcatttttaggtaaaaaagaTATTGCGTTA
TGC
Run BLAST on NCBI

transcript from alignment at sc0000093:622822..623174

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009435 ID=TCONS_00009435|Name=TCONS_00009435|organism=Clytia hemisphaerica|type=transcript|length=353bp|location=Sequence derived from alignment at sc0000093:622822..623174 (Clytia hemisphaerica)
GCATAACGCAATAtcttttttacctaaaaatgaGTGTGCtgatttcaaaa
attacaaagaagGTTTTGAAGAGTACTTATTTTACAGTCGGAACACTATA
TGGaaaaggcaactattgccttaacgggaaatattccccgaacgggaagg
tggaaAACTTCCCTAAATGGCTAGACTTTCCAAATCGGGAAGTTAACCtg
tttcccgatcgggaaagtgGCCTCTGAGCACTCCGGAAATGCCTgtggaa
agttaaaaacttgtACCTCTTTGGGGGGATTCTCTTTTGGAAAGAGAAAG
CAAAAAGTTCTTGCGGCAGAGTTTCTCTAAAAATTTCCCGTGTTTCATAT
ATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005291XLOC_005291Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009435-exon-sc0000093-1491911889:622822..623174TCONS_00009435-exon-sc0000093-1491911889:622822..623174Clytia hemisphaericaexon
TCONS_00009435-exon-sc0000093-1510915933:622822..623174TCONS_00009435-exon-sc0000093-1510915933:622822..623174Clytia hemisphaericaexon
TCONS_00009435-exon-sc0000093-1575043694:622822..623174TCONS_00009435-exon-sc0000093-1575043694:622822..623174Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:622822..623174 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.599453	0.9759	1.77858	0.664496	0.262547	0.160935	0.889616	1.66724	1.85134	5.24179	1.07538	2.72929	1.6662	0.812061	0.450398	1.10971	0.22225	1.8333	3.4968	2.01498	2.65465	0.381077	0.871909	1.05808	3.17152	0	0	1.09382	0.73417
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009435 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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