TCONS_00009519 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009519
Unique NameTCONS_00009519
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2607

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009519 ID=TCONS_00009519|Name=TCONS_00009519|organism=Clytia hemisphaerica|type=transcript|length=2607bp
GTGTATTTCGATCACGTGAACAACATAAACATAACATGGTAGCCGTAGTg
gcgagaaaaaaatttacgGAGGGTTTCGGTTGTTCGAAGAGAGAGGAAGT
TGTTTACTCAGAAACGAAACTGTTCAGTTTAGTAAACCAAACATTTTCAA
ACTTGTTAAAGTTTACACATAAAATGTAGAGACGAAGTCAATGAAGCCTT
TACGTTTATTTCCAATAATATTTGTGGTGCTGTTTGCATTTTTTGCAGAA
GTTTCTTCAGAGAGCCGGCATTTGTCGGGTCATGATGATCTTTTTGAAGA
TGCCATTCTTGAACATTTGAGGGATATCCGTGACGAAGAGGAAGAAAATG
AACCTTACTATGCGGACCCTGATGATGAAGTTGAAAGTCAGGATGAACAG
GAAGAAAGTCTCACAAAAGATCAATTAATGCAAGTCTTGGATGTCATAAA
GAAAGAAGCCCACAAAAGACAACTGGAACGATTACAATCTGAAAAGGAAC
TCACAACCGAAACACAAgatgataaaaatgataaaaatctaaacatagat
tCTAAGGATAAAAAAGACTCAATGAGTAAATCACCTTCTAACAAGGACTC
TGAGATAAAGAAAGATGAGTTGGCGCTGAATGTAAACAAAAGGGCTGACA
GCGTCAACACTAATGCTGAACCGGTCAAAGTCAAACGCCAGGAAAACGAT
CAAGTTGCATCAGTTGAATTTGATAATagtatagaaaaagaaaatgaact
tATAAATAATATCGACCTTCGAGATGTATTAGGTGCAAAAGATGAGGGGG
ATGAATCTACCAATACCAATCCACCGAAGCCTGCACATATTAAACAGGAG
AATGTGGTCAGTACAAAGCAAAATAAAGCTGGATTGGACCACGTGTCTTT
CATTGCTGTAGTAGCAGGATGCTGTGTAGCAGCGATCGCAGGATTGGGTC
TTGCAGCTTACTGCTGGTACAAatTGAGAGTAGAGACAAAGGAAGATGTG
GAAGACccaaaaactgtcaaaaaatcTTCACTCAAGAAAAGCAAAGACCC
TAAAGAAGAACAACCATTATCGAAAGATGAGGAGATGAACAGGAATGCTG
AATATTACAATTACCAACATGCTaaaaaccaaatcaaacaaCTTGGACAG
GGCGATGCTAAGACTGATGAGCGTGTCTTTTATTCCCTTAGACCGATCGG
TTCTGATAAATTTGGGACGATTGGAGGTGCAGAGACAACtgatgatgaag
atgatgatgatgataatacGGTTTATGAATGCCCTGGACCCGGCGCTTCT
GGAGATATGAAAATTGTCAACCCGATGTTCAGTGATGGTGAGAGTCGTCA
TAGTGACAAGACAAGCCATGATGGCTCCCCAACACCGCCAAACGAGCGAG
TTGAAGCCGTTacaaataataacaataatcaGTAGTAAGATAATAAGAAC
AATAACATCGCAAATTTATAGTCCCATAGTGGCGCATAACGTCAGTTGAA
TGTTATCTGAACGTttaaagaacgttgtgtgctaaCTCGGTAAGCTCTCA
GTTATCCGATTCTTTGTAgctacaatttttgaaatatttgatattCTTTT
TAATATAAGTTTCCAACCACGATTCCAGTGTCTATACACGATTGAACCAC
TTCTATGGTTCTATCAAATGGTGCATGGGCTGCACACTCGTAGGACCCTA
ATTGTCAGAAACTAGCGTGACGTAATGTACCCGGTCCTCTGGAATACCTC
TGCCGCTCATTCGATAACTGAGAATCTgccttgtacactttttttgtttc
tatcaTCTTTTAGGGGttaaatttatgttttaaaGGATCTATGTTCTGAA
AGGTgtctttttaaaatattcacGGACTTTCTCCTAAAGATCTGTAGAAT
GTCAGATACTTTACGTATGGTACCTTTCTAAGTTTTTACAAttattttaa
aacttacttTAGAATATTCTAGATATTATCTTCATTGATTAAAATGTCAT
ATCCTAGCTAAAACAGTACCCAATTTAGACTCATTTCAAGATCTTTGAGT
TGCTTTTGCCAAGTTTTAGTTTCTTTCTGTTTGTTCAATGTTAGCTTGGT
AGTGTCACAAATCAGACTTTTACTAAGACTTCTTCCTTCCTTTTTTGGCT
TAGAATTTtagatgttttatttttatatattaaTATAGCTTTATTAAAGA
tagatgtttttatttttccttggaatttattttgtatttaaCTTAAATCT
ATGCACTACTAATAAGTTTTTTTCTCTATTCATGCCTTCAGAAACCAATC
AATTAATCTGAAAACGACATTAATTACCTGCGAAATTTCTCCGAGAACTA
AACTATTTTTTCCTTCTTTCGATTCGATTTCGGAATGTTCTTAGACAAAA
TTCACACAAAGGAATCGGGTCCTCCTGGTTGGGGTTGATCACTAACCAAG
CAAAGAATATACTGATTGAAGTAATAATTATAGGTGTGCTTCCATTTTAT
TATTGCTTACTTTTTTGTATCATTTTGCGGATAAATTATGTTATGATAGA
ATTTTAATTATTGGAAggtaaaatctaaaataatgggaaaaaattaaaca
aaatcat
Run BLAST on NCBI

protein sequence of TCONS_00009519-protein

>TCONS_00009519-protein ID=TCONS_00009519-protein|Name=TCONS_00009519-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MKPLRLFPIIFVVLFAFFAEVSSESRHLSGHDDLFEDAILEHLRDIRDEE
EENEPYYADPDDEVESQDEQEESLTKDQLMQVLDVIKKEAHKRQLERLQS
EKELTTETQDDKNDKNLNIDSKDKKDSMSKSPSNKDSEIKKDELALNVNK
RADSVNTNAEPVKVKRQENDQVASVEFDNSIEKENELINNIDLRDVLGAK
DEGDESTNTNPPKPAHIKQENVVSTKQNKAGLDHVSFIAVVAGCCVAAIA
GLGLAAYCWYKLRVETKEDVEDPKTVKKSSLKKSKDPKEEQPLSKDEEMN
RNAEYYNYQHAKNQIKQLGQGDAKTDERVFYSLRPIGSDKFGTIGGAETT
DDEDDDDDNTVYECPGPGASGDMKIVNPMFSDGESRHSDKTSHDGSPTPP
NERVEAVTNNNNNQ
Run BLAST on NCBI

transcript from alignment at sc0000095:326392..336299-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009519 ID=TCONS_00009519|Name=TCONS_00009519|organism=Clytia hemisphaerica|type=transcript|length=9908bp|location=Sequence derived from alignment at sc0000095:326392..336299- (Clytia hemisphaerica)
GTGTATTTCGATCACGTGAACAACATAAACATAACATGGTAGCCGTAGTG
GCGAGAAAAAAATTTACGGAGGGTTTCGGTTGTTCGAAGAGAGAGGAAGT
TGTTTACTCAGAAACGAAACTGTTCAGTTTAGTAAACCAAACATTTTCAA
ACTTGTTAAAGTTTACACATAAAATGTAGAGACGAAGTCAATGAAGCCTT
TACGTTTATTTCCAATAATATTTGTGGTGCTGTTTGCATTTTTTGCAGAA
GGTAACTCTTTTTGTATGTCTTTGCTTTTTCCACCTACTAAAGTTAAAGA
CTAAGTGCGCAGTCATAAGAGGTAATTTGGTGGCTGTTTGGACTGTACTG
TAGTGCATTTGAATTGTTATTTGTTGAGCAATTTATATGTTAGAGTTTGT
GAAAGAAACTTAGGCTTTTCATAGTGCAGTGACTAAATACTATAAAATTT
TGGCAGCTTCCTGACACCTGATGTCAGAGAATGGCTTGTGTTATGAATAA
CCCACAGTACTTGGCTATTTTGAACTTTAAAAAATCCCGCACCTGGCTTG
TGCAGGTTCGGGTGTGTTTTGGTCAGGTTTTCGAGAGCAAAAATCCAAAG
TTTTACAGCCTGATCATCAATTATTGTTAAGGCTAAATTTTCATGTTTTG
CTATTTTGGCCCGAACATGACCCGTAAAATGTTCAGGTATGTTCAGGATA
TCATGGGTTTTGTTATAATGGTAGATGTTCCATCCAATCATTGGGTATAT
GACCCTGTTGGTGCACACCGGCCAGTCTGATCTGGTGCCGTTGACAAAAG
GTATTCTTGGACTTCAGACATCATGTACACATTTTCGGGTGTTGAAGAGT
ATTTGTGCAGTCCAGTTTACTGTGCGATTTTTGTAAAAAATTGCCATAGG
GAACAAAACAAAATAGTCAAAGATCAAAGAAGTTTACCGTTTACTTCAAT
TGCAATTGATAACAAGTTGTGGGGCTTTCAAAGTTTTTATATGAATGGGG
GCTTTCATGAGTTAAATCTTGGTACCTACTATTTTCAACTTTCTTCCAAC
TTGCCTTCCTTGAAAATAAAGAAGAAGAAATTGACAACATCACAATGGAG
CTCATGACGTCACCCGCGCGGAAAATTACACACTCGTAATTTGTTACATA
ATTTTTGGGTCATATTCGGGCCAAAACATTGTGATTGAGTCAAGTTTAGG
GCTACAAAACTTTAGATTTTGACCTCCAAAAACCTGGCCTGAACATGGCC
AGACCAGGTTCAGGTCATATTGAATTCATAATAAATTAGCGGTTAAAACA
TTACATATAATGACTCCAATGAAACCTAATTTATCTAAATGAGTTTCATA
AAAAAGAGTGCTCACACATCCTGCTTAAAAGTACACATATATGTAATCAT
GTCTGTGAATGTAAGATACAGTAGCCTAATGTCTGTGTTTGTGCTTTCAT
TCGCGAAAGTTTATGTTCGCAAAAAATGATTTTTTTGTCAAATTTGCAAA
AGTAAAAATGTTGTAAATTTTGCAATATTTCAACCTTGCAAAGTTTCTGC
TCACAGAAGTTTGTAAGCCTAAAGTACAAAAAGAATACCATAAATATAGA
CCTTTTGCTAGTTAGGATGTCATGTTGATTAATTAAAAACTGAAGCATCA
TAACAATGATAAGAAATAATAACTGAAACACACTTTGAAATGATTAAAAT
GCATTTATGTGTCATTGTTTTAATGCTGAAGATTTGGTGCAAAAAAGTGA
AACATGGAACATTTTTTACTGTATTGGCTCCAAATTGAAATGGGCGATTT
GGGAAAAGTTCTGTTTGTCTTTTGTACAAACCTCTGTAACAATGGGCGAG
CACCCTGTTGCTAAGATGTTGGTTTTGAATAGAAAACGAAACCACTGAAA
ACAATAATAAAGTAAGGTTCCCTGAAATCTCCTAATCCAGGGATCAGAGT
TTTAGTCCAAGCTGACAGGTTATCTCAGTGTCTGGCCGGTGCATCAACAG
GGTATATGACTAGGTGTGGTTGGAGGTGTCATATCTATCTATTTCAGTGC
TAAAATGTCCTATGCCTATGTCTGTTTAAAACTATTCATTACAAGTTCTC
CCGTTTCATAAATTCCAAGTTTAAGACCTTGAAATTTTAATCATGCTAAA
TTTTGATAAGCGTATACATTTAGAATTTTCGACATGTGGACTTTATTTAC
AGCTTTATAATTTTGTTAAATCTTGTACGTATTTTCAAAATAACCTAGCT
AAAAAAGCAACATTTCCAAGGGTCTTGAAATAAGATCGGTACTTATAATA
AAAAGATACTAAATATGAAGTTACTTTACACTTTTTACAAAATTTTTGAA
GGCTTCAGGATGTTCTTAACTGTTTGAATTTTAAGCCTGAAAATATTCTT
AACCATTTTCTTATGTTCACCATTTTGTGAGTATTTTTGTCCATAGATGT
TTTAGGGTCGCCTTGAAGTCTCCTGTTTATTGAGTTAAAGTTAATTATAA
ATTCACCTGAGATACCACCTGTTCACTAGAATTAGAAACCAAGTGAATTT
TCAAGTACATAAAAATCCTTTCAAGTTATACTGGCAAATTTATCGGCATC
TTACCAGCAAAACTCCTCGACAGCAATCTCTCAATTGAAACTGCTAATTA
GCGGATGTAGACAGTTTGCCAGCAACCATTCTGTAAATTCTTCTTTTTAG
AAAAGGATGACTTACAGGGAAACTTTTGCTAGAAACGAAGAAAAAAATCA
CTGTTTTGTCAGCACTTCTTTCACCATATGTTATTAGCCAGCAACTTGCT
GGTTGCTGTATAATTACATTTACATTTTGTGTCTTTTGAATGGCTTACTA
TTACCTGGTCATAAAATTGTTTTTGTATCTGAGATTTTAGTATTGAATCT
ATTTGATTGATAAAGATGCATTTGATTATTCAATTTAGTGAGGTTTCCAG
CTCTTAAAAACTAGTAAGGGGATTGATTTATTAAAGGGTCTGCAATAATA
ACAAGCTATAAAGTAATCACAAGTTTCTTATTCCTTTGTATCTTTAAAGT
GTCATTGATAGCTTGCTCTGAATTCAATGTTGATGTTCAATGATGTTCAA
ATCAATGCTTATAAGCTTTTTATTTATCCTTAAAAGGATAAATTTTACTC
AATTTGGAATTGGCAGATTAATCATAAATATAGACATAAAAGCATTATAG
AAATCAAAAAGGCAGAATAGAATACCAAAGCCTAGAAACAGTCGATCCAG
GAGTTAAGCTGTATATAATCTGTGATGTCACTTGTTGGAATTTACTTTTT
CCACCCATTTATAAACAGGATATTGTCTCCTACCACTCTTTTGATGTATC
CACTTCAGAAAAAGGGGTATGAGGCCTCAGCAGCCTTTAGTGGGTTTTCT
CATGTACCTTTTTGACAATAACAATGGTTTGTTTATGCAGGTTACTGTAG
TTTTTGAAAAATCGTTCACCAAACTTATTTAGTTTTTTTAGAATGTGCAG
GTATAAGTGCGAGTTAAAAATTACTAAAGTTTCTTGTTTAACTGGTTTTT
GTCTATTCAGATTGCAGTATTGTGTCTCATACTATTACTAATCTTAGTTA
TTAAAGATTTTGAAATTATTTTAATTGATTTTTATAATCAAGTTTTTCTA
CGTAAATATTGATAAATGCTTTTTACTCGTGTACTTTTTTAAGCAAACAT
GGCAACCTACAATCGTTTGGAAATTCACACGAGTTAAAATAATCATTGTC
AGAACAGTCAATTAGATTTTGCTCACAAACACAATGGATGTACTAGTTTA
CTAACAAACTAGCTTTCTGAAGAACTTTTATGAAGATAAGAAATATAGCA
AGCTTGCTTTGTTTGTTGATCATTAAAATCCTTGAATTAGCTCAATATTT
TTGACTGACAGTGACTATCATTATTTTTCTCCTTTGTTCTAGTTTCTTCA
GAGAGCCGGCATTTGTCGGGTCATGATGATCTTTTTGAAGATGCCATTCT
TGAACATTTGAGGGATATCCGTGACGAAGAGGAAGAAAATGAACCTTACT
ATGCGGACCCTGATGATGAAGTTGAAAGTCAGGATGAACAGGAAGAAAGT
CTCACAAAAGATCAATTAATGCAAGTCTTGGATGTCATAAAGAAAGAAGC
CCACAAAAGACAACTGGAACGATTACAATCTGAAAAGGAACTCACAACCG
AAACACAAGATGATAAAAATGATAAAAATCTAAACATAGATTCTAAGGAT
AAAAAAGACTCAATGAGTAAATCACCTTCTAACAAGGACTCTGAGATAAA
GAAAGATGAGTTGGCGCTGAATGTAAACAAAAGGGCTGACAGCGTCAACA
CTAATGCTGAACCGGTCAAAGTCAAACGCCAGGAAAACGATCAAGTTGCA
TCAGTTGAATTTGATAATAGTATAGAAAAAGAAAATGAACTTATAAATAA
TATCGACCTTCGAGATGTATTAGGTGCAAAAGATGAGGGGGATGAATCTA
CCAATACCAATCCACCGAAGCCTGCACATATTAAACAGGAGAATGTGGTC
AGTACAAAGCAAAATAAAGCTGGATTGGACCACGTGTCTTTCATTGGTAA
GAAACTTTTACGTTTTTTGTTTTTTTGATGAAGATTCTATAGAAGTCTTT
ATCCTGGGGATGTTCTCAGACTTTGACTTTGTGGCCCTGATTTTCGATAT
TTTATTAATAATAAGGCTTCAATAAGGCCCATATAAAAAATATCTTAAAA
TTGCTTTGTATAATCATGATACGGGACTCATAATCTAAGACAATTTTAAA
TCTTTTGATGGGTGAATATCAATGATTTACTTTTCTGGGCCATTCGGTTC
AATTGAACAACCCTACGCTCGCTCATGTTAAGGCTCTCTCTAATAAAATA
TTTTATTTCATTTATTTATCTTATTATTCTCTTTCATTTTTCATTTTCTT
TCTTTATTTTGATTAACAGCAGGTCCTTAATTGAACTCTACTTTTTCCCC
TCTCTTTCTTCTTAGAAATTTTCACAAACAGAATGAATTTCTGGAACGAA
TTCTCTTTTTTTTCAATTTCTCTGATAAATATTTTAACAGGAATAACCTT
TTTCTTACTGGTCTAAGGTGAAGAGGAAAGAACAGTTTCTCTAGCTCCCT
CATGAGATATTTCTTTAAAACCCAGATAACTTGATACAAAAGTAGCTCTG
TAGCTATGCAAAAAAGCATAATACCCCCTACAAAAATGACAGCTATTTTA
AATATATCACTTTGAATTACACCTTTTTAAACCATTTACATGGGTTTCTT
TTTCTTTTTCGTTATTGTTTTTCTTTTTCTCTTAAATGCTGTGATTCCTC
TTATGTTATAAAACACCTTTTTGCCATATTTTTTTCTTTAAACCTAACCT
TATGAGAATATCAGAATTCCTGCTTGTGTATTCTTATTCCCCACCTGCCT
GCTACTCTTTTTATATCTTCTACCTTATGCCTATCTACCTATTACTGTGC
CTCTTAAAAGTAGTTTTACATATGTATATCTTAGTCTTTTTAGACTTTTA
TTTTTAAATAAGAGTGATATCGTTTGCTTACTCATCAATTCTAATTTACA
AGCTTTTTCACATTGGATTGACACGGATGTGGAGCAACATTGGTCAAAAA
GAGGAAAAAATAAACATTTTTTTGCTTATATCAGCAAAATATAACAATAG
GCAGACACTGTCCTAATATGAAATATGTGTCTGATATGAAACGGGAACAC
TTGTGTAAAAATAAAACCTTTAAGAGGGATTTTAAAAATTTTATCTTCGT
AACCCTTTAAAACTTGAAAATTGTTGATACATATTCTTCAACAAAAAGTA
AACATAAAAAGTAGGAGGGACTTTGTCCGAAATCTTTCCTTTTAAAATGT
AATATATTAAATAAGTCTCAAATACATCAGGTTTCTTTGAAATAAGAGTG
AACTTTTTCAAAAGGTTTTTTATGTCAAATACTCCATTTTGTTAAATAAT
TTGAACATCATAATTATTCAATATTTCGAAATGAAACTTCCATAAGGAAG
TCCTCTCTCTCTCTCTGTTGGACAAAACGAGCTCTCGTTAATATAAATCA
ACCGAATAATTATACTTAAGCAATATCCAAGGACGCCAATTAGATCTTGT
TATTTTATTATTAAGATTCCCCTAGGTGCCATTAGAGGGCTAACGCCCCT
TAAGAGCTCTTAAAAAAATAGAACATTAGGGGGCACAATCCATTTGACCG
ATTTTAAGACTCAAGCGATTTATTTTGATTTTGTTAGATTATAATAACTT
TTGGCAGATGTAATTGAGAAACTAAGCGGCCCAAACAATCCCACCAAACT
GCTCTGAGAGGGGAAAACAGGCTGCCTTTTTTGTCTTAACCTCCGGTGAA
TTAAAAAAAGTGCGTTGCCCATATTTTAAAGTTCTCAAGCCTCTTCTTGC
TTCAAGAAAATCAAGGTCAACGAAGCCAAAACCTCCGTGATATATTTGAC
ATATAAAAGGGAATGCAAAGCTGTAATTTTTCTTGTACTGGAAGTTGATT
TTTGATTTTCTAGATACGCTTATAAGCTATAAGCGTCATGCTTCAAAAAA
CGTTCACCCCCGTTCATTTTAGCTTTTAGTGTATTTTAAGGACCTGATTT
TTAAAAGATTGACTCTATTTACTACATTTTAAGCGAAATTCTTTAATCGG
CTTCAAACATTAGATTTCTTTCTAGATTACTTTCTTTTCTTATTTTTACA
GCTGTAGTAGCAGGATGCTGTGTAGCAGCGATCGCAGGATTGGGTCTTGC
AGCTTACTGCTGGTACAAGTAAGTACTTTTTATCAGAGCTATTGTATTTG
CATCGAAAAATCCCCCTTCTTTTGAACGCCCCTCCTTCAAAATTAAAATT
ATTTCACCCCTCTAGGGGGGCTGGTGTTTATTTGAAATAAGTAGCAATTA
ACTTTATTAAAATAGCCTTGGTCAGAAATTATTTGATAAATACCTCCTTT
ATAAACGCCCCTTCTAAAAACCAAAGACTTCAACAATTCATCCGTAGCAT
TTATAGCACGAAGAAAGTTTACTTATGAATTAACTTTACCCTTACCCTCA
TTGGGCCAGGACACTTTTTCTCATAAATGAAACCTTGGCCAACGTTCCGG
TTTCTGTTCTGCAACCATCATTTTCCACACAATTTTTCTTCATTTTTATT
TCAGATTGAGAGTAGAGACAAAGGAAGATGTGGAAGACCCAAAAACTGTC
AAAAAATCTTCACTCAAGAAAAGCAAAGACCCTAAAGAAGAACAAGTAAT
ATTTCTCTACATTCCACCTTTTCGGCTACTGTTTTACTAAATTCGAGGAT
ATTCTTTCAAGTTAAAAGACATTAAAAATAAACAACACCAATAGAACCAG
CCTATTTCAATGACTCTGATAAAAGTTACGTAAAACTGATATAATTCATT
TGTATTATGTTGTTTTGGATTTAGTATAACTTTGGATATTATACATTGTA
CATTTTATTGGGGGTAATCTTTTATGTGAGAAGAGAAATTCTTATAAGAA
TATTGTCCCGTTCTTCTAAACTTCAGCCATTATCGAAAGATGAGGAGATG
AACAGGAATGCTGAATATTACAATTACCAACATGCTAAAAACCAAATCAA
ACAACTTGGACAGTAAGTTTTATACCCTTCTGCCTTGGTGTACGGATATA
TTTAATACACTTAGTTAGTATGCATTTATTCGAACTAGGTTTCTATTGCA
TTTCACTGGCTCCCCCGACTGGCTCCGCATAGCTCCGTTATATAAAATCA
GTTCCCTCTGGGACTCCTTAACCATATGACTGGTCTTTATTGCCTTTGAA
CTTTAACTCTGTTAGCCGCAGAATTCATTAACAAACAAGCTCTGGCGAAG
GTTATGCTCACTTTTATTTTGTATTTTGTCTGTGCGACCAAGAAAAGTTA
ACTTTTTGACTCCGTCTTTCGATTCCTAATATAAACTGACGACATCTGAT
AGAAACGCCATTTATTTCTCTCTTTTTTGCTTAGGGGCGATGCTAAGACT
GATGAGCGTGTCTTTTATTCCCTTAGACCGATCGGTTCTGATAAATTTGG
GACGATTGGAGGTGCAGAGACAACTGATGATGAAGATGATGATGATGATA
ATACGGTTTATGAATGCCCTGGACCCGGCGCTGTAAGTTATTTAAACGAT
ACAGTTAATTCCCTCTCTATTCTGAGCCTCTATTTCTGTAATTCGAACCA
AAACATTGGCCGACTCAAGCTGGAAAGTAGTGTTAAATACTCTCTGTACT
TTGAATTTTTCTCAAATTCGAATAAAAATTTCATGGTCCATTGAAGATCG
AATTAGAGAGAGTCAATTGTACTTTCTTTTTTTCCTATGAGGTATAGAAT
ACAGGGGTTTTCATTTGACCAGTTTATCTTAACTTTATGCTTGGGCGTAG
CAATACTCCTCCCTGTTGTTTGTTTTCTTCGTTCTGTTTTTCCCCGCTAT
TTTTTAATCGTCTTGCAGGCTGGGAATAATCTTGGAACTCGTGAAATATT
TATCGTATTTCGATAACTATAATATAATAGTTCTCTGTTTATTTTTAGTC
TGGAGATATGAAAATTGTCAACCCGATGTTCAGTGATGGTGAGAGTCGTC
ATAGTGACAAGACAAGCCATGATGGCTCCCCAACACCGCCAAACGAGCGA
GTTGAAGCCGTTACAAATAATAACAATAATCAGTAGTAAGATAATAAGAA
CAATAACATCGCAAATTTATAGTCCCATAGTGGCGCATAACGTCAGTTGA
ATGTTATCTGAACGTTTAAAGAACGTTGTGTGCTAACTCGGTAAGCTCTC
AGTTATCCGATTCTTTGTAGCTACAATTTTTGAAATATTTGATATTCTTT
TTAATATAAGTTTCCAACCACGATTCCAGTGTCTATACACGATTGAACCA
CTTCTATGGTTCTATCAAATGGTGCATGGGCTGCACACTCGTAGGACCCT
AATTGTCAGAAACTAGCGTGACGTAATGTACCCGGTCCTCTGGAATACCT
CTGCCGCTCATTCGATAACTGAGAATCTGCCTTGTACACTTTTTTTGTTT
CTATCATCTTTTAGGGGTTAAATTTATGTTTTAAAGGATCTATGTTCTGA
AAGGTGTCTTTTTAAAATATTCACGGACTTTCTCCTAAAGATCTGTAGAA
TGTCAGATACTTTACGTATGGTACCTTTCTAAGTTTTTACAATTATTTTA
AAACTTACTTTAGAATATTCTAGATATTATCTTCATTGATTAAAATGTCA
TATCCTAGCTAAAACAGTACCCAATTTAGACTCATTTCAAGATCTTTGAG
TTGCTTTTGCCAAGTTTTAGTTTCTTTCTGTTTGTTCAATGTTAGCTTGG
TAGTGTCACAAATCAGACTTTTACTAAGACTTCTTCCTTCCTTTTTTGGC
TTAGAATTTTAGATGTTTTATTTTTATATATTAATATAGCTTTATTAAAG
ATAGATGTTTTTATTTTTCCTTGGAATTTATTTTGTATTTAACTTAAATC
TATGCACTACTAATAAGTTTTTTTCTCTATTCATGCCTTCAGAAACCAAT
CAATTAATCTGAAAACGACATTAATTACCTGCGAAATTTCTCCGAGAACT
AAACTATTTTTTCCTTCTTTCGATTCGATTTCGGAATGTTCTTAGACAAA
ATTCACACAAAGGAATCGGGTCCTCCTGGTTGGGGTTGATCACTAACCAA
GCAAAGAATATACTGATTGAAGTAATAATTATAGGTGTGCTTCCATTTTA
TTATTGCTTACTTTTTTGTATCATTTTGCGGATAAATTATGTTATGATAG
AATTTTAATTATTGGAAGGTAAAATCTAAAATAATGGGAAAAAATTAAAC
AAAATCAT

Coding sequence (CDS) from alignment at sc0000095:326392..336299-

>TCONS_00009519 ID=TCONS_00009519|Name=TCONS_00009519|organism=Clytia hemisphaerica|type=CDS|length=1245bp|location=Sequence derived from alignment at sc0000095:326392..336299- (Clytia hemisphaerica)
ATGAAGCCTTTACGTTTATTTCCAATAATATTTGTGGTGCTGTTTGCATT
TTTTGCAGAAGTTTCTTCAGAGAGCCGGCATTTGTCGGGTCATGATGATC
TTTTTGAAGATGCCATTCTTGAACATTTGAGGGATATCCGTGACGAAGAG
GAAGAAAATGAACCTTACTATGCGGACCCTGATGATGAAGTTGAAAGTCA
GGATGAACAGGAAGAAAGTCTCACAAAAGATCAATTAATGCAAGTCTTGG
ATGTCATAAAGAAAGAAGCCCACAAAAGACAACTGGAACGATTACAATCT
GAAAAGGAACTCACAACCGAAACACAAGATGATAAAAATGATAAAAATCT
AAACATAGATTCTAAGGATAAAAAAGACTCAATGAGTAAATCACCTTCTA
ACAAGGACTCTGAGATAAAGAAAGATGAGTTGGCGCTGAATGTAAACAAA
AGGGCTGACAGCGTCAACACTAATGCTGAACCGGTCAAAGTCAAACGCCA
GGAAAACGATCAAGTTGCATCAGTTGAATTTGATAATAGTATAGAAAAAG
AAAATGAACTTATAAATAATATCGACCTTCGAGATGTATTAGGTGCAAAA
GATGAGGGGGATGAATCTACCAATACCAATCCACCGAAGCCTGCACATAT
TAAACAGGAGAATGTGGTCAGTACAAAGCAAAATAAAGCTGGATTGGACC
ACGTGTCTTTCATTGCTGTAGTAGCAGGATGCTGTGTAGCAGCGATCGCA
GGATTGGGTCTTGCAGCTTACTGCTGGTACAAATTGAGAGTAGAGACAAA
GGAAGATGTGGAAGACCCAAAAACTGTCAAAAAATCTTCACTCAAGAAAA
GCAAAGACCCTAAAGAAGAACAACCATTATCGAAAGATGAGGAGATGAAC
AGGAATGCTGAATATTACAATTACCAACATGCTAAAAACCAAATCAAACA
ACTTGGACAGGGCGATGCTAAGACTGATGAGCGTGTCTTTTATTCCCTTA
GACCGATCGGTTCTGATAAATTTGGGACGATTGGAGGTGCAGAGACAACT
GATGATGAAGATGATGATGATGATAATACGGTTTATGAATGCCCTGGACC
CGGCGCTTCTGGAGATATGAAAATTGTCAACCCGATGTTCAGTGATGGTG
AGAGTCGTCATAGTGACAAGACAAGCCATGATGGCTCCCCAACACCGCCA
AACGAGCGAGTTGAAGCCGTTACAAATAATAACAATAATCAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005314XLOC_005314Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009519-proteinTCONS_00009519-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009519-exon-sc0000095-1575043694:336049..336299TCONS_00009519-exon-sc0000095-1575043694:336049..336299Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:331704..332357TCONS_00009519-exon-sc0000095-1575043694:331704..332357Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:329482..329548TCONS_00009519-exon-sc0000095-1575043694:329482..329548Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:329005..329095TCONS_00009519-exon-sc0000095-1575043694:329005..329095Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:328638..328723TCONS_00009519-exon-sc0000095-1575043694:328638..328723Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:328118..328265TCONS_00009519-exon-sc0000095-1575043694:328118..328265Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1575043694:326392..327701TCONS_00009519-exon-sc0000095-1575043694:326392..327701Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:336049..336299TCONS_00009519-exon-sc0000095-1510915933:336049..336299Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:331704..332357TCONS_00009519-exon-sc0000095-1510915933:331704..332357Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:329482..329548TCONS_00009519-exon-sc0000095-1510915933:329482..329548Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:329005..329095TCONS_00009519-exon-sc0000095-1510915933:329005..329095Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:328638..328723TCONS_00009519-exon-sc0000095-1510915933:328638..328723Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:328118..328265TCONS_00009519-exon-sc0000095-1510915933:328118..328265Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1510915933:326392..327701TCONS_00009519-exon-sc0000095-1510915933:326392..327701Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:336049..336299TCONS_00009519-exon-sc0000095-1491911889:336049..336299Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:331704..332357TCONS_00009519-exon-sc0000095-1491911889:331704..332357Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:329482..329548TCONS_00009519-exon-sc0000095-1491911889:329482..329548Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:329005..329095TCONS_00009519-exon-sc0000095-1491911889:329005..329095Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:328638..328723TCONS_00009519-exon-sc0000095-1491911889:328638..328723Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:328118..328265TCONS_00009519-exon-sc0000095-1491911889:328118..328265Clytia hemisphaericaexon
TCONS_00009519-exon-sc0000095-1491911889:326392..327701TCONS_00009519-exon-sc0000095-1491911889:326392..327701Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:326392..336299 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.348235	0.658344	0	0	15.9724	9.23939	38.8613	36.3812	49.9042	42.556	33.999	34.8877	11.4221	7.98697	9.92068	9.05573	14.8886	15.9826	15.6074	21.0622	13.8532	10.3504	4.79235	11.5892	15.5294	17.1103	12.4735	7.15906	10.8799	11.5034
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009635NPDC1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009519 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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