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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010248 ID=TCONS_00010248|Name=TCONS_00010248|organism=Clytia hemisphaerica|type=transcript|length=1415bp
ATTCCATGGTCAGTTCTTGAATGCTACAACCTCCCATCAAAACTAGTTGC
TGAGGTACTCAGCAACCGAAACCAATTGATGTCACTTCACTAAATCTACC
AGTATGGAAACACTATCTTGAAGACTGTCCAATGCAAGATAGAGACTGGG
TACTAGACGGCATTCAAAATGGATTCTCTTTAGATTTTGATTCTACACCG
TTGTCAAGTGCCAGCAAGAACTTACTATCAGCTCATATCCAACCTGGTAT
CATTGATGACTACCTGGAGATGGAATTGAAACAAGGAACCATGTTGGGAC
CATATAAAGATCCCCCTTATGATCAGTGTCAAATTAACCGGTTTGGTGTG
ATACCGAAATCAGATGGTAAATTCCGAATGATCACTGATCTGTCTTTTCC
CCTTGGCGAAAGTGTTAACGATGGAATATCTAAAGAAAATTCGACTGTTT
CCTATACTGGACTTACTGCCGCAGTTAAAAAGATTCTAGCTCTCGGTAAA
GGATGTTTGTTGGCAAAATTCGATATTCAACGAGCATATAGGATGATTCC
ATTACAAGAGGATGAACGTAATTTAGTTGTCATCAAATGGAAAGATTATT
ACTTTGTTGATCTAGCATTACCATTCGGAGCTAGGAGTGCACCAAGAATA
TTTACTAGATTCTCCGATGTTTTAGAATGGATATTCCTGCAGAAAGGACC
TGTCAAACATATGCAACACTCTTTAGATGATTTTCTTGTACTAGGACTAT
CACAGTCTAATGATTGCCAAAAAGGTTTGGAGAACTCTTTAGGACTTTGC
CAAGAACTAGGTGTTCCTATTGAGCATCGAAAAACAATATACCCAACAAC
CAGACTCGTCTTTCTTGGCATGGAGATTGATACTGAAAAGATGGAGATGC
GAATTCCAGaagaaaaattggataaaatcCGACAACTTTTAGATCAATGG
GTTCAGAAAAAGTCTGGTACAAAACGCTCATTATTATCTCTGATTGGTTC
TTTATACTATTGTTGTCAAGCAGTGGTCGTTGGCAAGCCTTTTATGATTC
GATTAACAAAGAAAGCATATTCAGTTGATAAGTTACATTTTTTAGTTAAA
TTGGATGAAAAAGAAATCGAGGACTTGATGTGGTGGTATTATTTATTGAA
TTCATGGAATGGTAGAAGTTTGATGAGCAATTTTGATAAACACCGAAATG
TTGTGAAACTTCATTCATAGTTGTTGAACATCAATCATTTTTCAATGCTC
ATTGATTTAAAAGGATTATAATAGCCTACGTGTAGCTCGATTTTTTAACT
CATTTTTTCcagaactttttttatttactttgatACCTTATACATAATTG
ATATTTTCTAATTATTTTCTTATTGTTATGATATtatcttttttatgaaa
attataaaacCAAAC Run BLAST on NCBI transcript from alignment at sc0000104:43041..45101+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010248 ID=TCONS_00010248|Name=TCONS_00010248|organism=Clytia hemisphaerica|type=transcript|length=2061bp|location=Sequence derived from alignment at sc0000104:43041..45101+ (Clytia hemisphaerica)
ATTCCATGGTCAGTTCTTGAATGCTACAACCTCCCATCAAAACTAGTTGC
TGAGGTAGAGTTTTGGcagtcggaaccactacatGAAAAGttactattgc
cttaacgggaaatattaaCCGAACGGGAAGGTAAAAATAACCcgaaaagg
aaactgtttccagattgaaaatttcattacttttctgtttcccgttttgg
tcaagaacttttcatcgtccccgaacgggaaatataattttgtaaacaaa
gcagattttgtttcccgatcgagaaaaagtttccaaatagggaagttttt
aattgggaatCTGGAAATTAGAATTAAAGAAGCGATAACCTggtggattt
cttaactacctggtgaatattatttattttccctCCTTTACAAGAAGGAT
AAGTTTAAAACTTTCCACAGGAATTTCCGGAGTGCTCAGAGGCCACTTTC
CCGATAGGGAAACTGGTGAACTTCCCGATTTGGAAAGTCTATTCATTTCG
GGAAGTTttccaccttcccgttcgggaaatatttcctgttaaggcaatag
ttgccttttCCATGTAGTGGTCCCGACTGTTTGGTGCTTTGAAGAGAATT
TAAAATTGCTAAGATTGTCAACTGATAACACAGCTAGCACAGGAAGAACT
TTTTAATAATTaacataagaaaaaaaattatgatagcTTTTATATTCTAG
GTACTCAGCAACCGAAACCAATTGATGTCACTTCACTAAATCTACCAGTA
TGGAAACACTATCTTGAAGACTGTCCAATGCAAGATAGAGACTGGGTACT
AGACGGCATTCAAAATGGATTCTCTTTAGATTTTGATTCTACACCGTTGT
CAAGTGCCAGCAAGAACTTACTATCAGCTCATATCCAACCTGGTATCATT
GATGACTACCTGGAGATGGAATTGAAACAAGGAACCATGTTGGGACCATA
TAAAGATCCCCCTTATGATCAGTGTCAAATTAACCGGTTTGGTGTGATAC
CGAAATCAGATGGTAAATTCCGAATGATCACTGATCTGTCTTTTCCCCTT
GGCGAAAGTGTTAACGATGGAATATCTAAAGAAAATTCGACTGTTTCCTA
TACTGGACTTACTGCCGCAGTTAAAAAGATTCTAGCTCTCGGTAAAGGAT
GTTTGTTGGCAAAATTCGATATTCAACGAGCATATAGGATGATTCCATTA
CAAGAGGATGAACGTAATTTAGTTGTCATCAAATGGAAAGATTATTACTT
TGTTGATCTAGCATTACCATTCGGAGCTAGGAGTGCACCAAGAATATTTA
CTAGATTCTCCGATGTTTTAGAATGGATATTCCTGCAGAAAGGACCTGTC
AAACATATGCAACACTCTTTAGATGATTTTCTTGTACTAGGACTATCACA
GTCTAATGATTGCCAAAAAGGTTTGGAGAACTCTTTAGGACTTTGCCAAG
AACTAGGTGTTCCTATTGAGCATCGAAAAACAATATACCCAACAACCAGA
CTCGTCTTTCTTGGCATGGAGATTGATACTGAAAAGATGGAGATGCGAAT
TCCAGaagaaaaattggataaaatcCGACAACTTTTAGATCAATGGGTTC
AGAAAAAGTCTGGTACAAAACGCTCATTATTATCTCTGATTGGTTCTTTA
TACTATTGTTGTCAAGCAGTGGTCGTTGGCAAGCCTTTTATGATTCGATT
AACAAAGAAAGCATATTCAGTTGATAAGTTACATTTTTTAGTTAAATTGG
ATGAAAAAGAAATCGAGGACTTGATGTGGTGGTATTATTTATTGAATTCA
TGGAATGGTAGAAGTTTGATGAGCAATTTTGATAAACACCGAAATGTTGT
GAAACTTCATTCATAGTTGTTGAACATCAATCATTTTTCAATGCTCATTG
ATTTAAAAGGATTATAATAGCCTACGTGTAGCTCGATTTTTTAACTCATT
TTTTCcagaactttttttatttactttgatACCTTATACATAATTGATAT
TTTCTAATTATTTTCTTATTGTTATGATATtatcttttttatgaaaatta
taaaacCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010248-exon-sc0000104-1491911889:43041..43094 | TCONS_00010248-exon-sc0000104-1491911889:43041..43094 | Clytia hemisphaerica | exon |
| TCONS_00010248-exon-sc0000104-1510915933:43041..43094 | TCONS_00010248-exon-sc0000104-1510915933:43041..43094 | Clytia hemisphaerica | exon |
| TCONS_00010248-exon-sc0000104-1575043694:43041..43094 | TCONS_00010248-exon-sc0000104-1575043694:43041..43094 | Clytia hemisphaerica | exon |
| TCONS_00010248-exon-sc0000104-1491911889:43741..45101 | TCONS_00010248-exon-sc0000104-1491911889:43741..45101 | Clytia hemisphaerica | exon |
| TCONS_00010248-exon-sc0000104-1510915933:43741..45101 | TCONS_00010248-exon-sc0000104-1510915933:43741..45101 | Clytia hemisphaerica | exon |
| TCONS_00010248-exon-sc0000104-1575043694:43741..45101 | TCONS_00010248-exon-sc0000104-1575043694:43741..45101 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:43041..45101 + |
Blast
The following BLAST results are available for this feature:
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